Gene annotation
Transcriptome id Sobic.005G135700.1
Synonym CHS, Sb05g019940, ATCHS, TT4
Functional annotation chalcone and stilbene synthases, putative, expressed
UniProt C5Y3P3
Pfam PF08541 PF00195
Panther DB PTHR11877 PTHR11877:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0008610lipid biosynthetic process


Orthologs (automatic annotation)
TAIR AT5G13930 : Chalcone and stilbene synthase family protein
RAP-DB (Rice) LOC_Os11g32610.1 : chalcone and stilbene synthases, putative, expressed
MaizeGDB (Corn) Zm00025a048134
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G088500 integral membrane protein DUF6 containing protein, expressed -
2 Sobic.010G108301 - K15397: 3-ketoacyl-CoA synthase
3 Sobic.002G394700 gibberellin receptor GID1L2, putative, expressed -
4 Sobic.002G267000 helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.007G138800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.010G108600 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
7 Sobic.010G108200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
8 Sobic.001G173100 cytochrome P450, putative, expressed -
9 Sobic.006G125600 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
10 Sobic.003G071300 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
11 Sobic.007G095000 cytochrome P450, putative, expressed -
12 Sobic.004G293800 thioesterase family protein, putative, expressed -
13 Sobic.005G135000 chalcone synthase, putative, expressed -
14 Sobic.002G039400 YABBY domain containing protein, putative, expressed -
15 Sobic.005G135800 chalcone and stilbene synthases, putative, expressed -
16 Sobic.010G124500 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
17 Sobic.003G071100 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
18 Sobic.001G147650 - -
19 Sobic.010G108100 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
20 Sobic.010G108001 - K15397: 3-ketoacyl-CoA synthase


Gene co-expression network
sample Sobic005G135700 Sobic005G135700 Sobic005G088500 Sobic005G088500 Sobic005G135700--Sobic005G088500 Sobic010G108301 Sobic010G108301 Sobic005G135700--Sobic010G108301 Sobic002G394700 Sobic002G394700 Sobic005G135700--Sobic002G394700 Sobic002G267000 Sobic002G267000 Sobic005G135700--Sobic002G267000 Sobic007G138800 Sobic007G138800 Sobic005G135700--Sobic007G138800 Sobic010G108600 Sobic010G108600 Sobic005G135700--Sobic010G108600 Sobic010G108200 Sobic010G108200 Sobic005G135700--Sobic010G108200 Sobic001G173100 Sobic001G173100 Sobic005G135700--Sobic001G173100 Sobic006G125600 Sobic006G125600 Sobic005G135700--Sobic006G125600 Sobic002G039400 Sobic002G039400 Sobic005G088500--Sobic002G039400 Sobic005G088500--Sobic005G135700 Sobic005G088500--Sobic002G394700 Sobic006G046500 Sobic006G046500 Sobic005G088500--Sobic006G046500 Sobic005G088500--Sobic010G108200 Sobic009G109850 Sobic009G109850 Sobic005G088500--Sobic009G109850 Sobic001G510200 Sobic001G510200 Sobic005G088500--Sobic001G510200 Sobic005G088500--Sobic006G125600 Sobic003G071300 Sobic003G071300 Sobic005G088500--Sobic003G071300 Sobic010G108301--Sobic002G267000 Sobic010G108301--Sobic007G138800 Sobic010G108301--Sobic010G108600 Sobic005G135000 Sobic005G135000 Sobic010G108301--Sobic005G135000 Sobic008G005400 Sobic008G005400 Sobic010G108301--Sobic008G005400 Sobic010G108100 Sobic010G108100 Sobic010G108301--Sobic010G108100 Sobic010G108301--Sobic001G173100 Sobic007G095000 Sobic007G095000 Sobic010G108301--Sobic007G095000 Sobic004G293800 Sobic004G293800 Sobic010G108301--Sobic004G293800 Sobic002G394700--Sobic010G108200 Sobic002G394700--Sobic006G125600 Sobic002G394700--Sobic003G071300 Sobic002G394700--Sobic007G095000 Sobic010G124500 Sobic010G124500 Sobic002G394700--Sobic010G124500 Sobic003G071100 Sobic003G071100 Sobic002G394700--Sobic003G071100 Sobic005G135800 Sobic005G135800 Sobic002G394700--Sobic005G135800 Sobic005G135400 Sobic005G135400 Sobic002G394700--Sobic005G135400 Sobic002G394700--Sobic010G108600 Sobic002G267000--Sobic007G138800 Sobic002G267000--Sobic010G108301 Sobic002G267000--Sobic010G108600 Sobic002G267000--Sobic005G135000 Sobic002G267000--Sobic010G108100 Sobic002G267000--Sobic004G293800 Sobic002G267000--Sobic005G135800 Sobic002G267000--Sobic010G124500 Sobic002G267000--Sobic007G095000 Sobic007G138800--Sobic002G267000 Sobic007G138800--Sobic010G108600 Sobic007G138800--Sobic010G108301 Sobic007G138800--Sobic005G135000 Sobic007G138800--Sobic010G108100 Sobic007G138800--Sobic005G135800 Sobic007G138800--Sobic010G124500 Sobic007G138800--Sobic007G095000 Sobic007G195500 Sobic007G195500 Sobic007G138800--Sobic007G195500 Sobic010G108600--Sobic010G108100 Sobic010G108600--Sobic004G293800 Sobic010G108600--Sobic005G135800 Sobic010G108600--Sobic010G124500 Sobic010G108600--Sobic003G071100 Sobic010G108600--Sobic007G138800 Sobic010G108001 Sobic010G108001 Sobic010G108600--Sobic010G108001 Sobic010G108600--Sobic007G195500 Sobic010G108600--Sobic007G095000 Sobic010G108200--Sobic003G071300 Sobic010G108200--Sobic006G125600 Sobic010G108200--Sobic003G071100 Sobic010G108200--Sobic005G135400 Sobic010G108200--Sobic010G124500 Sobic010G108200--Sobic004G293800 Sobic010G108200--Sobic005G135800 Sobic010G108200--Sobic010G108001 Sobic010G108200--Sobic007G095000 Sobic001G173100--Sobic007G138800 Sobic001G173100--Sobic010G108600 Sobic001G173100--Sobic002G267000 Sobic001G173100--Sobic007G095000 Sobic001G173100--Sobic010G108301 Sobic001G173100--Sobic010G108100 Sobic001G173100--Sobic005G135000 Sobic001G173100--Sobic005G135800 Sobic001G173100--Sobic010G124500 Sobic006G125600--Sobic003G071300 Sobic006G125600--Sobic010G124500 Sobic006G125600--Sobic003G071100 Sobic006G125600--Sobic005G135800 Sobic006G125600--Sobic010G108200 Sobic006G125600--Sobic007G095000 Sobic006G125600--Sobic005G135400 Sobic006G125600--Sobic010G108001 Sobic006G125600--Sobic004G293800
Octagon: transcription factors


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