Gene annotation
Transcriptome id Sobic.007G138800.1
Synonym Sb07g021420, ATMYB30, MYB30
Functional annotation MYB family transcription factor, putative, expressed
UniProt Q8S434 , Q8S435 , C5YL99 , Q8S443 , Q6URU4
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF624
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G28910 : myb domain protein 30
RAP-DB (Rice) LOC_Os08g33940.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a052072 , Zm00025a020817 , Zm00025a053742 , Zm00025a020983 , Zm00025a005907 , Zm00025a005909 , Zm00025a032132 , Zm00025a058059 , Zm00025a046969 , Zm00025a053739 , Zm00025a032982 , Zm00025a048846 , Zm00025a013922 , Zm00025a015262 , Zm00025a034111 , Zm00025a033367 , Zm00025a013472 , Zm00025a011116
Brachypodium KQK21499 , KQK00034 , KQK02077 , KQJ89518 , KQK20023 , KQK20025 , KQK20024 , KQK20026 , KQJ92481 , PNT76712 , PNT76711 , KQJ98451 , KQJ88197 , KQJ91657 , KQK15086 , KQK19995 , PNT77324 , KQJ90229 , PNT76695
Barley HORVU2Hr1G028470.3 , HORVU2Hr1G028470.2 , HORVU2Hr1G028470.1 , HORVU2Hr1G028470.7 , HORVU2Hr1G028470.6 , HORVU2Hr1G028470.5 , HORVU2Hr1G028470.4 , HORVU6Hr1G083250.1 , HORVU6Hr1G083250.2 , HORVU6Hr1G083250.3 , HORVU5Hr1G045540.3 , HORVU5Hr1G045540.6 , HORVU4Hr1G023510.2 , HORVU4Hr1G023510.7 , HORVU4Hr1G023510.6 , HORVU4Hr1G023510.5 , HORVU4Hr1G023510.4 , HORVU6Hr1G060650.6 , HORVU6Hr1G060650.2 , HORVU6Hr1G060650.1 , HORVU5Hr1G045550.8 , HORVU5Hr1G045550.9 , HORVU5Hr1G045550.2 , HORVU5Hr1G045550.3 , HORVU5Hr1G045550.1 , HORVU5Hr1G045550.6 , HORVU5Hr1G045550.7 , HORVU5Hr1G045550.4 , HORVU5Hr1G045550.5 , HORVU5Hr1G123880.2 , HORVU5Hr1G123880.1 , HORVU5Hr1G045540.1 , HORVU5Hr1G045540.2 , HORVU5Hr1G045540.5 , HORVU5Hr1G045540.4
Wheat TraesCS2B02G343800 , TraesCS6A02G344700 , TraesCS5B02G141200 , TraesCS4D02G123300 , TraesCS5B02G556300 , TraesCS4B02G129100 , TraesCS5D02G149600 , TraesCS2D02G163700 , TraesCS5A02G227400 , TraesCS5D02G234800 , TraesCS6B02G377400 , TraesCS5D02G552200 , TraesCS2A02G069300 , TraesCS2A02G157600 , TraesCS6D02G327300 , TraesCS6D02G219500 , TraesCS5B02G226100 , TraesCS6B02G265400 , TraesCS5A02G142500 , TraesCS6A02G236900 , TraesCS2B02G183100 , TraesCS2D02G324800 , TraesCS2A02G338200 , TraesCS4A02G322200 , TraesCS2D02G068000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G267000 helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.010G108600 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
3 Sobic.010G108301 - K15397: 3-ketoacyl-CoA synthase
4 Sobic.005G135000 chalcone synthase, putative, expressed -
5 Sobic.010G108100 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
6 Sobic.005G135800 chalcone and stilbene synthases, putative, expressed -
7 Sobic.010G124500 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
8 Sobic.007G095000 cytochrome P450, putative, expressed -
9 Sobic.007G195500 thiol protease SEN102 precursor, putative, expressed -
10 Sobic.004G293800 thioesterase family protein, putative, expressed -
11 Sobic.003G071100 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
12 Sobic.010G108001 - K15397: 3-ketoacyl-CoA synthase
13 Sobic.006G125600 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
14 Sobic.003G071300 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
15 Sobic.010G108200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
16 Sobic.005G135400 chalcone synthase, putative, expressed -
17 Sobic.003G040400 cytochrome P450, putative, expressed -
18 Sobic.003G206300 THION27 - Plant thionin family protein precursor, expressed -
19 Sobic.009G116300 OsSub46 - Putative Subtilisin homologue, expressed -
20 Sobic.003G206200 THION27 - Plant thionin family protein precursor, expressed -


Gene co-expression network
sample Sobic007G138800 Sobic007G138800 Sobic002G267000 Sobic002G267000 Sobic007G138800--Sobic002G267000 Sobic010G108600 Sobic010G108600 Sobic007G138800--Sobic010G108600 Sobic010G108301 Sobic010G108301 Sobic007G138800--Sobic010G108301 Sobic005G135000 Sobic005G135000 Sobic007G138800--Sobic005G135000 Sobic010G108100 Sobic010G108100 Sobic007G138800--Sobic010G108100 Sobic005G135800 Sobic005G135800 Sobic007G138800--Sobic005G135800 Sobic010G124500 Sobic010G124500 Sobic007G138800--Sobic010G124500 Sobic007G095000 Sobic007G095000 Sobic007G138800--Sobic007G095000 Sobic007G195500 Sobic007G195500 Sobic007G138800--Sobic007G195500 Sobic002G267000--Sobic007G138800 Sobic002G267000--Sobic010G108301 Sobic002G267000--Sobic010G108600 Sobic002G267000--Sobic005G135000 Sobic002G267000--Sobic010G108100 Sobic004G293800 Sobic004G293800 Sobic002G267000--Sobic004G293800 Sobic002G267000--Sobic005G135800 Sobic002G267000--Sobic010G124500 Sobic002G267000--Sobic007G095000 Sobic010G108600--Sobic010G108100 Sobic010G108600--Sobic004G293800 Sobic010G108600--Sobic005G135800 Sobic010G108600--Sobic010G124500 Sobic003G071100 Sobic003G071100 Sobic010G108600--Sobic003G071100 Sobic010G108600--Sobic007G138800 Sobic010G108001 Sobic010G108001 Sobic010G108600--Sobic010G108001 Sobic010G108600--Sobic007G195500 Sobic010G108600--Sobic007G095000 Sobic010G108301--Sobic002G267000 Sobic010G108301--Sobic007G138800 Sobic010G108301--Sobic010G108600 Sobic010G108301--Sobic005G135000 Sobic008G005400 Sobic008G005400 Sobic010G108301--Sobic008G005400 Sobic010G108301--Sobic010G108100 Sobic001G173100 Sobic001G173100 Sobic010G108301--Sobic001G173100 Sobic010G108301--Sobic007G095000 Sobic010G108301--Sobic004G293800 Sobic005G135000--Sobic010G108600 Sobic005G135000--Sobic007G138800 Sobic005G135000--Sobic010G108100 Sobic005G135000--Sobic002G267000 Sobic005G135000--Sobic007G195500 Sobic005G135000--Sobic004G293800 Sobic005G135000--Sobic005G135800 Sobic005G135000--Sobic010G124500 Sobic005G135000--Sobic010G108001 Sobic010G108100--Sobic007G195500 Sobic010G108100--Sobic004G293800 Sobic010G108100--Sobic010G108001 Sobic010G108100--Sobic010G108600 Sobic010G108100--Sobic005G135800 Sobic010G108100--Sobic003G071100 Sobic010G108100--Sobic010G124500 Sobic009G116300 Sobic009G116300 Sobic010G108100--Sobic009G116300 Sobic003G206000 Sobic003G206000 Sobic010G108100--Sobic003G206000 Sobic005G135800--Sobic010G124500 Sobic005G135800--Sobic003G071100 Sobic005G135800--Sobic010G108001 Sobic003G071300 Sobic003G071300 Sobic005G135800--Sobic003G071300 Sobic005G135800--Sobic004G293800 Sobic005G135800--Sobic007G195500 Sobic006G125600 Sobic006G125600 Sobic005G135800--Sobic006G125600 Sobic005G135400 Sobic005G135400 Sobic005G135800--Sobic005G135400 Sobic005G135800--Sobic009G116300 Sobic010G124500--Sobic005G135800 Sobic010G124500--Sobic003G071100 Sobic010G124500--Sobic010G108001 Sobic010G124500--Sobic003G071300 Sobic010G124500--Sobic006G125600 Sobic010G124500--Sobic004G293800 Sobic010G124500--Sobic007G195500 Sobic010G124500--Sobic005G135400 Sobic010G124500--Sobic007G095000 Sobic007G095000--Sobic006G125600 Sobic007G095000--Sobic005G135800 Sobic007G095000--Sobic010G124500 Sobic007G095000--Sobic003G071300 Sobic007G095000--Sobic003G071100 Sobic010G108200 Sobic010G108200 Sobic007G095000--Sobic010G108200 Sobic007G095000--Sobic010G108001 Sobic007G095000--Sobic005G135400 Sobic007G095000--Sobic004G293800 Sobic007G195500--Sobic010G108001 Sobic007G195500--Sobic010G108100 Sobic007G195500--Sobic005G135800 Sobic007G195500--Sobic009G116300 Sobic007G195500--Sobic003G206000 Sobic003G206300 Sobic003G206300 Sobic007G195500--Sobic003G206300 Sobic010G200000 Sobic010G200000 Sobic007G195500--Sobic010G200000 Sobic001G332050 Sobic001G332050 Sobic007G195500--Sobic001G332050
Octagon: transcription factors


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