Gene annotation
Transcriptome id Sobic.005G135400.1
Synonym CHS, ATCHS, TT4
Functional annotation chalcone synthase, putative, expressed
UniProt A0A1B6PSA1
Pfam PF02797
Panther DB PTHR11877 PTHR11877:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13930 : Chalcone and stilbene synthase family protein
RAP-DB (Rice) LOC_Os10g08620.1 : chalcone and stilbene synthases, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G071100 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
2 Sobic.003G071300 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
3 Sobic.010G159500 LTPL5 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
4 Sobic.010G108001 - K15397: 3-ketoacyl-CoA synthase
5 Sobic.003G206300 THION27 - Plant thionin family protein precursor, expressed -
6 Sobic.002G129600 LTPL62 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
7 Sobic.009G116300 OsSub46 - Putative Subtilisin homologue, expressed -
8 Sobic.010G200000 triacylglycerol lipase precursor, putative, expressed K01052: lysosomal acid lipase/cholesteryl ester hydrolase
9 Sobic.001G332050 - -
10 Sobic.001G332050 - -
11 Sobic.001G332050 - -
12 Sobic.001G332050 - -
13 Sobic.001G332050 - -
14 Sobic.001G332050 - -
15 Sobic.001G332050 - -
16 Sobic.001G332050 - -
17 Sobic.001G332050 - -
18 Sobic.001G332050 - -
19 Sobic.001G332050 - -
20 Sobic.001G332050 - -


Gene co-expression network
sample Sobic005G135400 Sobic005G135400 Sobic003G071100 Sobic003G071100 Sobic005G135400--Sobic003G071100 Sobic003G071300 Sobic003G071300 Sobic005G135400--Sobic003G071300 Sobic010G159500 Sobic010G159500 Sobic005G135400--Sobic010G159500 Sobic010G108001 Sobic010G108001 Sobic005G135400--Sobic010G108001 Sobic003G206300 Sobic003G206300 Sobic005G135400--Sobic003G206300 Sobic002G129600 Sobic002G129600 Sobic005G135400--Sobic002G129600 Sobic009G116300 Sobic009G116300 Sobic005G135400--Sobic009G116300 Sobic010G200000 Sobic010G200000 Sobic005G135400--Sobic010G200000 Sobic001G332050 Sobic001G332050 Sobic005G135400--Sobic001G332050 Sobic010G124500 Sobic010G124500 Sobic003G071100--Sobic010G124500 Sobic005G135800 Sobic005G135800 Sobic003G071100--Sobic005G135800 Sobic003G071100--Sobic010G108001 Sobic003G071100--Sobic003G071300 Sobic004G293800 Sobic004G293800 Sobic003G071100--Sobic004G293800 Sobic003G071100--Sobic005G135400 Sobic006G125600 Sobic006G125600 Sobic003G071100--Sobic006G125600 Sobic007G195500 Sobic007G195500 Sobic003G071100--Sobic007G195500 Sobic003G071100--Sobic009G116300 Sobic003G071300--Sobic003G071100 Sobic003G071300--Sobic006G125600 Sobic010G108200 Sobic010G108200 Sobic003G071300--Sobic010G108200 Sobic003G071300--Sobic010G124500 Sobic003G071300--Sobic005G135800 Sobic003G071300--Sobic005G135400 Sobic003G071300--Sobic010G108001 Sobic003G071300--Sobic004G293800 Sobic007G095000 Sobic007G095000 Sobic003G071300--Sobic007G095000 Sobic008G138300 Sobic008G138300 Sobic010G159500--Sobic008G138300 Sobic010G159500--Sobic009G116300 Sobic010G159500--Sobic003G206300 Sobic010G159500--Sobic010G200000 Sobic003G206000 Sobic003G206000 Sobic010G159500--Sobic003G206000 Sobic010G159500--Sobic001G332050 Sobic010G108001--Sobic003G071100 Sobic010G108001--Sobic005G135800 Sobic010G108001--Sobic007G195500 Sobic010G108001--Sobic004G293800 Sobic010G108001--Sobic010G124500 Sobic010G108001--Sobic003G206000 Sobic010G108001--Sobic009G116300 Sobic010G108001--Sobic010G200000 Sobic010G108001--Sobic001G332050 Sobic003G206300--Sobic009G116300 Sobic003G206300--Sobic010G200000 Sobic003G206300--Sobic001G332050 Sobic003G413400 Sobic003G413400 Sobic002G129600--Sobic003G413400 Sobic004G159200 Sobic004G159200 Sobic002G129600--Sobic004G159200 Sobic002G129600--Sobic003G206300 Sobic003G206200 Sobic003G206200 Sobic002G129600--Sobic003G206200 Sobic004G090700 Sobic004G090700 Sobic002G129600--Sobic004G090700 Sobic002G129600--Sobic009G116300 Sobic002G129600--Sobic010G200000 Sobic002G129600--Sobic003G206000 Sobic002G129600--Sobic001G332050 Sobic009G116300--Sobic010G200000 Sobic009G116300--Sobic001G332050 Sobic010G200000--Sobic009G116300 Sobic010G200000--Sobic001G332050 Sobic001G332050--Sobic001G332050
Octagon: transcription factors


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