Gene annotation
Transcriptome id Sobic.003G071100.2
Synonym PAS2, PEP, Sb03g006030
Functional annotation expressed protein
UniProt A0A1B6Q1S6
Pfam PF04387
Panther DB PTHR11035
NCBI CDD KOG3187; Protein tyrosine phosphatase-like protein PTPLA (contains Pro instead of catalytic Arg)
KEGG Orthology K10703; HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G10480 : Protein-tyrosine phosphatase-like, PTPLA
RAP-DB (Rice) LOC_Os04g20280.1 : expressed protein
MaizeGDB (Corn) Zm00025a035643
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G124500 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
2 Sobic.005G135800 chalcone and stilbene synthases, putative, expressed -
3 Sobic.010G108001 - K15397: 3-ketoacyl-CoA synthase
4 Sobic.003G071300 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
5 Sobic.004G293800 thioesterase family protein, putative, expressed -
6 Sobic.005G135400 chalcone synthase, putative, expressed -
7 Sobic.006G125600 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
8 Sobic.007G195500 thiol protease SEN102 precursor, putative, expressed -
9 Sobic.009G116300 OsSub46 - Putative Subtilisin homologue, expressed -
10 Sobic.003G206000 THION27 - Plant thionin family protein precursor, expressed -
11 Sobic.001G332050 - -
12 Sobic.001G332050 - -
13 Sobic.001G332050 - -
14 Sobic.001G332050 - -
15 Sobic.001G332050 - -
16 Sobic.001G332050 - -
17 Sobic.001G332050 - -
18 Sobic.001G332050 - -
19 Sobic.001G332050 - -
20 Sobic.001G332050 - -


Gene co-expression network
sample Sobic003G071100 Sobic003G071100 Sobic010G124500 Sobic010G124500 Sobic003G071100--Sobic010G124500 Sobic005G135800 Sobic005G135800 Sobic003G071100--Sobic005G135800 Sobic010G108001 Sobic010G108001 Sobic003G071100--Sobic010G108001 Sobic003G071300 Sobic003G071300 Sobic003G071100--Sobic003G071300 Sobic004G293800 Sobic004G293800 Sobic003G071100--Sobic004G293800 Sobic005G135400 Sobic005G135400 Sobic003G071100--Sobic005G135400 Sobic006G125600 Sobic006G125600 Sobic003G071100--Sobic006G125600 Sobic007G195500 Sobic007G195500 Sobic003G071100--Sobic007G195500 Sobic009G116300 Sobic009G116300 Sobic003G071100--Sobic009G116300 Sobic010G124500--Sobic005G135800 Sobic010G124500--Sobic003G071100 Sobic010G124500--Sobic010G108001 Sobic010G124500--Sobic003G071300 Sobic010G124500--Sobic006G125600 Sobic010G124500--Sobic004G293800 Sobic010G124500--Sobic007G195500 Sobic010G124500--Sobic005G135400 Sobic007G095000 Sobic007G095000 Sobic010G124500--Sobic007G095000 Sobic005G135800--Sobic010G124500 Sobic005G135800--Sobic003G071100 Sobic005G135800--Sobic010G108001 Sobic005G135800--Sobic003G071300 Sobic005G135800--Sobic004G293800 Sobic005G135800--Sobic007G195500 Sobic005G135800--Sobic006G125600 Sobic005G135800--Sobic005G135400 Sobic005G135800--Sobic009G116300 Sobic010G108001--Sobic003G071100 Sobic010G108001--Sobic005G135800 Sobic010G108001--Sobic007G195500 Sobic010G108001--Sobic004G293800 Sobic010G108001--Sobic010G124500 Sobic003G206000 Sobic003G206000 Sobic010G108001--Sobic003G206000 Sobic010G108001--Sobic009G116300 Sobic010G200000 Sobic010G200000 Sobic010G108001--Sobic010G200000 Sobic001G332050 Sobic001G332050 Sobic010G108001--Sobic001G332050 Sobic003G071300--Sobic003G071100 Sobic003G071300--Sobic006G125600 Sobic010G108200 Sobic010G108200 Sobic003G071300--Sobic010G108200 Sobic003G071300--Sobic010G124500 Sobic003G071300--Sobic005G135800 Sobic003G071300--Sobic005G135400 Sobic003G071300--Sobic010G108001 Sobic003G071300--Sobic004G293800 Sobic003G071300--Sobic007G095000 Sobic004G293800--Sobic010G108001 Sobic004G293800--Sobic003G071100 Sobic004G293800--Sobic005G135800 Sobic004G293800--Sobic007G195500 Sobic004G293800--Sobic010G124500 Sobic010G108100 Sobic010G108100 Sobic004G293800--Sobic010G108100 Sobic004G293800--Sobic003G071300 Sobic004G293800--Sobic005G135400 Sobic004G293800--Sobic010G108200 Sobic005G135400--Sobic003G071100 Sobic005G135400--Sobic003G071300 Sobic010G159500 Sobic010G159500 Sobic005G135400--Sobic010G159500 Sobic005G135400--Sobic010G108001 Sobic003G206300 Sobic003G206300 Sobic005G135400--Sobic003G206300 Sobic002G129600 Sobic002G129600 Sobic005G135400--Sobic002G129600 Sobic005G135400--Sobic009G116300 Sobic005G135400--Sobic010G200000 Sobic005G135400--Sobic001G332050 Sobic006G125600--Sobic003G071300 Sobic006G125600--Sobic010G124500 Sobic006G125600--Sobic003G071100 Sobic006G125600--Sobic005G135800 Sobic006G125600--Sobic010G108200 Sobic006G125600--Sobic007G095000 Sobic006G125600--Sobic005G135400 Sobic006G125600--Sobic010G108001 Sobic006G125600--Sobic004G293800 Sobic007G195500--Sobic010G108001 Sobic007G195500--Sobic010G108100 Sobic007G195500--Sobic005G135800 Sobic007G195500--Sobic009G116300 Sobic007G195500--Sobic003G206000 Sobic007G195500--Sobic003G206300 Sobic007G195500--Sobic010G200000 Sobic007G195500--Sobic001G332050 Sobic009G116300--Sobic010G200000 Sobic009G116300--Sobic001G332050
Octagon: transcription factors


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