Gene annotation
Transcriptome id Sobic.010G108001.1
Synonym -
Functional annotation -
UniProt A0A194YIE2
Pfam PF02797 PF08392
Panther DB PTHR31561 PTHR31561:SF18
NCBI CDD -
KEGG Orthology K15397; 3-ketoacyl-CoA synthase
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0016020membrane GO:0006633fatty acid biosynthetic process


Orthologs (automatic annotation)
TAIR AT1G25450 : 3-ketoacyl-CoA synthase 5
RAP-DB (Rice) LOC_Os06g14810.1 : 3-ketoacyl-CoA synthase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G071100 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
2 Sobic.005G135800 chalcone and stilbene synthases, putative, expressed -
3 Sobic.007G195500 thiol protease SEN102 precursor, putative, expressed -
4 Sobic.004G293800 thioesterase family protein, putative, expressed -
5 Sobic.010G124500 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
6 Sobic.003G206000 THION27 - Plant thionin family protein precursor, expressed -
7 Sobic.009G116300 OsSub46 - Putative Subtilisin homologue, expressed -
8 Sobic.010G200000 triacylglycerol lipase precursor, putative, expressed K01052: lysosomal acid lipase/cholesteryl ester hydrolase
9 Sobic.001G332050 - -
10 Sobic.001G332050 - -
11 Sobic.001G332050 - -
12 Sobic.001G332050 - -
13 Sobic.001G332050 - -
14 Sobic.001G332050 - -
15 Sobic.001G332050 - -
16 Sobic.001G332050 - -
17 Sobic.001G332050 - -
18 Sobic.001G332050 - -
19 Sobic.001G332050 - -
20 Sobic.001G332050 - -


Gene co-expression network
sample Sobic010G108001 Sobic010G108001 Sobic003G071100 Sobic003G071100 Sobic010G108001--Sobic003G071100 Sobic005G135800 Sobic005G135800 Sobic010G108001--Sobic005G135800 Sobic007G195500 Sobic007G195500 Sobic010G108001--Sobic007G195500 Sobic004G293800 Sobic004G293800 Sobic010G108001--Sobic004G293800 Sobic010G124500 Sobic010G124500 Sobic010G108001--Sobic010G124500 Sobic003G206000 Sobic003G206000 Sobic010G108001--Sobic003G206000 Sobic009G116300 Sobic009G116300 Sobic010G108001--Sobic009G116300 Sobic010G200000 Sobic010G200000 Sobic010G108001--Sobic010G200000 Sobic001G332050 Sobic001G332050 Sobic010G108001--Sobic001G332050 Sobic003G071100--Sobic010G124500 Sobic003G071100--Sobic005G135800 Sobic003G071100--Sobic010G108001 Sobic003G071300 Sobic003G071300 Sobic003G071100--Sobic003G071300 Sobic003G071100--Sobic004G293800 Sobic005G135400 Sobic005G135400 Sobic003G071100--Sobic005G135400 Sobic006G125600 Sobic006G125600 Sobic003G071100--Sobic006G125600 Sobic003G071100--Sobic007G195500 Sobic003G071100--Sobic009G116300 Sobic005G135800--Sobic010G124500 Sobic005G135800--Sobic003G071100 Sobic005G135800--Sobic010G108001 Sobic005G135800--Sobic003G071300 Sobic005G135800--Sobic004G293800 Sobic005G135800--Sobic007G195500 Sobic005G135800--Sobic006G125600 Sobic005G135800--Sobic005G135400 Sobic005G135800--Sobic009G116300 Sobic007G195500--Sobic010G108001 Sobic010G108100 Sobic010G108100 Sobic007G195500--Sobic010G108100 Sobic007G195500--Sobic005G135800 Sobic007G195500--Sobic009G116300 Sobic007G195500--Sobic003G206000 Sobic003G206300 Sobic003G206300 Sobic007G195500--Sobic003G206300 Sobic007G195500--Sobic010G200000 Sobic007G195500--Sobic001G332050 Sobic004G293800--Sobic010G108001 Sobic004G293800--Sobic003G071100 Sobic004G293800--Sobic005G135800 Sobic004G293800--Sobic007G195500 Sobic004G293800--Sobic010G124500 Sobic004G293800--Sobic010G108100 Sobic004G293800--Sobic003G071300 Sobic004G293800--Sobic005G135400 Sobic010G108200 Sobic010G108200 Sobic004G293800--Sobic010G108200 Sobic010G124500--Sobic005G135800 Sobic010G124500--Sobic003G071100 Sobic010G124500--Sobic010G108001 Sobic010G124500--Sobic003G071300 Sobic010G124500--Sobic006G125600 Sobic010G124500--Sobic004G293800 Sobic010G124500--Sobic007G195500 Sobic010G124500--Sobic005G135400 Sobic007G095000 Sobic007G095000 Sobic010G124500--Sobic007G095000 Sobic003G206000--Sobic001G332050 Sobic009G116300--Sobic010G200000 Sobic009G116300--Sobic001G332050 Sobic010G200000--Sobic009G116300 Sobic010G200000--Sobic001G332050 Sobic001G332050--Sobic001G332050
Octagon: transcription factors


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