Gene annotation
Transcriptome id Sobic.010G108301.1
Synonym -
Functional annotation -
UniProt A0A1W0VSD4
Pfam PF08541 PF08392
Panther DB PTHR31561 PTHR31561:SF30
NCBI CDD -
KEGG Orthology K15397; 3-ketoacyl-CoA synthase
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0008610lipid biosynthetic process GO:0016020membrane GO:0006633fatty acid biosynthetic process


Orthologs (automatic annotation)
TAIR AT1G25450 : 3-ketoacyl-CoA synthase 5
RAP-DB (Rice) LOC_Os02g49920.1 : 3-ketoacyl-CoA synthase, putative, expressed
MaizeGDB (Corn) Zm00025a028878
Brachypodium -
Barley HORVU1Hr1G089710.1 , HORVU1Hr1G089710.2 , HORVU1Hr1G089710.3
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G267000 helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.007G138800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.010G108600 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
4 Sobic.005G135000 chalcone synthase, putative, expressed -
5 Sobic.008G005400 cysteine-rich receptor-like protein kinase 4 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
6 Sobic.010G108100 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
7 Sobic.001G173100 cytochrome P450, putative, expressed -
8 Sobic.007G095000 cytochrome P450, putative, expressed -
9 Sobic.004G293800 thioesterase family protein, putative, expressed -
10 Sobic.005G135800 chalcone and stilbene synthases, putative, expressed -
11 Sobic.010G124500 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
12 Sobic.003G071100 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
13 Sobic.006G125600 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
14 Sobic.007G195500 thiol protease SEN102 precursor, putative, expressed -
15 Sobic.010G108001 - K15397: 3-ketoacyl-CoA synthase
16 Sobic.010G108200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
17 Sobic.003G071300 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
18 Sobic.003G414100 tropinone reductase, putative, expressed K08081: tropinone reductase I
19 Sobic.002G394700 gibberellin receptor GID1L2, putative, expressed -
20 Sobic.006G188100 nitrilase-associated protein, putative, expressed K18635: protein SPIRAL1 and related proteins


Gene co-expression network
sample Sobic010G108301 Sobic010G108301 Sobic002G267000 Sobic002G267000 Sobic010G108301--Sobic002G267000 Sobic007G138800 Sobic007G138800 Sobic010G108301--Sobic007G138800 Sobic010G108600 Sobic010G108600 Sobic010G108301--Sobic010G108600 Sobic005G135000 Sobic005G135000 Sobic010G108301--Sobic005G135000 Sobic008G005400 Sobic008G005400 Sobic010G108301--Sobic008G005400 Sobic010G108100 Sobic010G108100 Sobic010G108301--Sobic010G108100 Sobic001G173100 Sobic001G173100 Sobic010G108301--Sobic001G173100 Sobic007G095000 Sobic007G095000 Sobic010G108301--Sobic007G095000 Sobic004G293800 Sobic004G293800 Sobic010G108301--Sobic004G293800 Sobic002G267000--Sobic007G138800 Sobic002G267000--Sobic010G108301 Sobic002G267000--Sobic010G108600 Sobic002G267000--Sobic005G135000 Sobic002G267000--Sobic010G108100 Sobic002G267000--Sobic004G293800 Sobic005G135800 Sobic005G135800 Sobic002G267000--Sobic005G135800 Sobic010G124500 Sobic010G124500 Sobic002G267000--Sobic010G124500 Sobic002G267000--Sobic007G095000 Sobic007G138800--Sobic002G267000 Sobic007G138800--Sobic010G108600 Sobic007G138800--Sobic010G108301 Sobic007G138800--Sobic005G135000 Sobic007G138800--Sobic010G108100 Sobic007G138800--Sobic005G135800 Sobic007G138800--Sobic010G124500 Sobic007G138800--Sobic007G095000 Sobic007G195500 Sobic007G195500 Sobic007G138800--Sobic007G195500 Sobic010G108600--Sobic010G108100 Sobic010G108600--Sobic004G293800 Sobic010G108600--Sobic005G135800 Sobic010G108600--Sobic010G124500 Sobic003G071100 Sobic003G071100 Sobic010G108600--Sobic003G071100 Sobic010G108600--Sobic007G138800 Sobic010G108001 Sobic010G108001 Sobic010G108600--Sobic010G108001 Sobic010G108600--Sobic007G195500 Sobic010G108600--Sobic007G095000 Sobic005G135000--Sobic010G108600 Sobic005G135000--Sobic007G138800 Sobic005G135000--Sobic010G108100 Sobic005G135000--Sobic002G267000 Sobic005G135000--Sobic007G195500 Sobic005G135000--Sobic004G293800 Sobic005G135000--Sobic005G135800 Sobic005G135000--Sobic010G124500 Sobic005G135000--Sobic010G108001 Sobic008G005400--Sobic010G108301 Sobic008G005400--Sobic002G267000 Sobic003G414100 Sobic003G414100 Sobic008G005400--Sobic003G414100 Sobic008G005400--Sobic007G138800 Sobic006G188100 Sobic006G188100 Sobic008G005400--Sobic006G188100 Sobic008G005400--Sobic005G135000 Sobic008G005400--Sobic010G108600 Sobic008G005400--Sobic010G108100 Sobic008G005400--Sobic001G173100 Sobic010G108100--Sobic007G195500 Sobic010G108100--Sobic004G293800 Sobic010G108100--Sobic010G108001 Sobic010G108100--Sobic010G108600 Sobic010G108100--Sobic005G135800 Sobic010G108100--Sobic003G071100 Sobic010G108100--Sobic010G124500 Sobic009G116300 Sobic009G116300 Sobic010G108100--Sobic009G116300 Sobic003G206000 Sobic003G206000 Sobic010G108100--Sobic003G206000 Sobic001G173100--Sobic007G138800 Sobic001G173100--Sobic010G108600 Sobic001G173100--Sobic002G267000 Sobic001G173100--Sobic007G095000 Sobic001G173100--Sobic010G108301 Sobic001G173100--Sobic010G108100 Sobic001G173100--Sobic005G135000 Sobic001G173100--Sobic005G135800 Sobic001G173100--Sobic010G124500 Sobic006G125600 Sobic006G125600 Sobic007G095000--Sobic006G125600 Sobic007G095000--Sobic005G135800 Sobic007G095000--Sobic010G124500 Sobic003G071300 Sobic003G071300 Sobic007G095000--Sobic003G071300 Sobic007G095000--Sobic003G071100 Sobic010G108200 Sobic010G108200 Sobic007G095000--Sobic010G108200 Sobic007G095000--Sobic010G108001 Sobic005G135400 Sobic005G135400 Sobic007G095000--Sobic005G135400 Sobic007G095000--Sobic004G293800 Sobic004G293800--Sobic010G108001 Sobic004G293800--Sobic003G071100 Sobic004G293800--Sobic005G135800 Sobic004G293800--Sobic007G195500 Sobic004G293800--Sobic010G124500 Sobic004G293800--Sobic010G108100 Sobic004G293800--Sobic003G071300 Sobic004G293800--Sobic005G135400 Sobic004G293800--Sobic010G108200
Octagon: transcription factors


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