Gene annotation
Transcriptome id Sobic.005G135000.2
Synonym CHS, ATCHS, TT4, Sb05g019870
Functional annotation chalcone synthase, putative, expressed
UniProt A0A1Z5RIL0
Pfam PF08541 PF00195
Panther DB PTHR11877 PTHR11877:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0008610lipid biosynthetic process


Orthologs (automatic annotation)
TAIR AT5G13930 : Chalcone and stilbene synthase family protein
RAP-DB (Rice) LOC_Os11g32580.1 : chalcone synthase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU2Hr1G005220.3 , HORVU2Hr1G005220.2 , HORVU2Hr1G005220.5 , HORVU2Hr1G005220.4 , HORVU2Hr1G004690.1 , HORVU2Hr1G004690.3 , HORVU2Hr1G004690.4 , HORVU7Hr1G009190.1 , HORVU6Hr1G074060.1 , HORVU6Hr1G074060.2 , HORVU2Hr1G116390.1 , HORVU2Hr1G116390.2 , HORVU2Hr1G116390.3 , HORVU2Hr1G116390.4
Wheat TraesCS2B02G048400 , TraesCS6A02G298400 , TraesCS6D02G278200 , TraesCS2B02G558400 , TraesCS2B02G558400 , TraesCS2A02G035300 , TraesCS4A02G437900 , TraesCS2A02G025600 , TraesCS6B02G327900 , TraesCS2B02G613100 , TraesCS2D02G034500 , TraesCS2A02G527700 , TraesCS2A02G527700 , TraesCS2D02G530600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G108600 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
2 Sobic.007G138800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.010G108100 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
4 Sobic.002G267000 helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.007G195500 thiol protease SEN102 precursor, putative, expressed -
6 Sobic.004G293800 thioesterase family protein, putative, expressed -
7 Sobic.005G135800 chalcone and stilbene synthases, putative, expressed -
8 Sobic.010G124500 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
9 Sobic.010G108001 - K15397: 3-ketoacyl-CoA synthase
10 Sobic.003G071100 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
11 Sobic.010G108301 - K15397: 3-ketoacyl-CoA synthase
12 Sobic.007G095000 cytochrome P450, putative, expressed -
13 Sobic.006G125600 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
14 Sobic.007G064600 cytochrome P450, putative, expressed -
15 Sobic.003G071300 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
16 Sobic.010G108200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
17 Sobic.003G239400 wax synthase isoform 3, putative, expressed -
18 Sobic.003G206000 THION27 - Plant thionin family protein precursor, expressed -
19 Sobic.010G200000 triacylglycerol lipase precursor, putative, expressed K01052: lysosomal acid lipase/cholesteryl ester hydrolase
20 Sobic.009G116300 OsSub46 - Putative Subtilisin homologue, expressed -


Gene co-expression network
sample Sobic005G135000 Sobic005G135000 Sobic010G108600 Sobic010G108600 Sobic005G135000--Sobic010G108600 Sobic007G138800 Sobic007G138800 Sobic005G135000--Sobic007G138800 Sobic010G108100 Sobic010G108100 Sobic005G135000--Sobic010G108100 Sobic002G267000 Sobic002G267000 Sobic005G135000--Sobic002G267000 Sobic007G195500 Sobic007G195500 Sobic005G135000--Sobic007G195500 Sobic004G293800 Sobic004G293800 Sobic005G135000--Sobic004G293800 Sobic005G135800 Sobic005G135800 Sobic005G135000--Sobic005G135800 Sobic010G124500 Sobic010G124500 Sobic005G135000--Sobic010G124500 Sobic010G108001 Sobic010G108001 Sobic005G135000--Sobic010G108001 Sobic010G108600--Sobic010G108100 Sobic010G108600--Sobic004G293800 Sobic010G108600--Sobic005G135800 Sobic010G108600--Sobic010G124500 Sobic003G071100 Sobic003G071100 Sobic010G108600--Sobic003G071100 Sobic010G108600--Sobic007G138800 Sobic010G108600--Sobic010G108001 Sobic010G108600--Sobic007G195500 Sobic007G095000 Sobic007G095000 Sobic010G108600--Sobic007G095000 Sobic007G138800--Sobic002G267000 Sobic007G138800--Sobic010G108600 Sobic010G108301 Sobic010G108301 Sobic007G138800--Sobic010G108301 Sobic007G138800--Sobic005G135000 Sobic007G138800--Sobic010G108100 Sobic007G138800--Sobic005G135800 Sobic007G138800--Sobic010G124500 Sobic007G138800--Sobic007G095000 Sobic007G138800--Sobic007G195500 Sobic010G108100--Sobic007G195500 Sobic010G108100--Sobic004G293800 Sobic010G108100--Sobic010G108001 Sobic010G108100--Sobic010G108600 Sobic010G108100--Sobic005G135800 Sobic010G108100--Sobic003G071100 Sobic010G108100--Sobic010G124500 Sobic009G116300 Sobic009G116300 Sobic010G108100--Sobic009G116300 Sobic003G206000 Sobic003G206000 Sobic010G108100--Sobic003G206000 Sobic002G267000--Sobic007G138800 Sobic002G267000--Sobic010G108301 Sobic002G267000--Sobic010G108600 Sobic002G267000--Sobic005G135000 Sobic002G267000--Sobic010G108100 Sobic002G267000--Sobic004G293800 Sobic002G267000--Sobic005G135800 Sobic002G267000--Sobic010G124500 Sobic002G267000--Sobic007G095000 Sobic007G195500--Sobic010G108001 Sobic007G195500--Sobic010G108100 Sobic007G195500--Sobic005G135800 Sobic007G195500--Sobic009G116300 Sobic007G195500--Sobic003G206000 Sobic003G206300 Sobic003G206300 Sobic007G195500--Sobic003G206300 Sobic010G200000 Sobic010G200000 Sobic007G195500--Sobic010G200000 Sobic001G332050 Sobic001G332050 Sobic007G195500--Sobic001G332050 Sobic004G293800--Sobic010G108001 Sobic004G293800--Sobic003G071100 Sobic004G293800--Sobic005G135800 Sobic004G293800--Sobic007G195500 Sobic004G293800--Sobic010G124500 Sobic004G293800--Sobic010G108100 Sobic003G071300 Sobic003G071300 Sobic004G293800--Sobic003G071300 Sobic005G135400 Sobic005G135400 Sobic004G293800--Sobic005G135400 Sobic010G108200 Sobic010G108200 Sobic004G293800--Sobic010G108200 Sobic005G135800--Sobic010G124500 Sobic005G135800--Sobic003G071100 Sobic005G135800--Sobic010G108001 Sobic005G135800--Sobic003G071300 Sobic005G135800--Sobic004G293800 Sobic005G135800--Sobic007G195500 Sobic006G125600 Sobic006G125600 Sobic005G135800--Sobic006G125600 Sobic005G135800--Sobic005G135400 Sobic005G135800--Sobic009G116300 Sobic010G124500--Sobic005G135800 Sobic010G124500--Sobic003G071100 Sobic010G124500--Sobic010G108001 Sobic010G124500--Sobic003G071300 Sobic010G124500--Sobic006G125600 Sobic010G124500--Sobic004G293800 Sobic010G124500--Sobic007G195500 Sobic010G124500--Sobic005G135400 Sobic010G124500--Sobic007G095000 Sobic010G108001--Sobic003G071100 Sobic010G108001--Sobic005G135800 Sobic010G108001--Sobic007G195500 Sobic010G108001--Sobic004G293800 Sobic010G108001--Sobic010G124500 Sobic010G108001--Sobic003G206000 Sobic010G108001--Sobic009G116300 Sobic010G108001--Sobic010G200000 Sobic010G108001--Sobic001G332050
Octagon: transcription factors


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