Gene annotation
Transcriptome id Sobic.010G108600.1
Synonym G2, POP1, CUT1, CER6, KCS6, Sb10g009490
Functional annotation 3-ketoacyl-CoA synthase, putative, expressed
UniProt C5Z837
Pfam PF08541 PF08392
Panther DB PTHR31561 PTHR31561:SF18
NCBI CDD -
KEGG Orthology K15397; 3-ketoacyl-CoA synthase
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0008610lipid biosynthetic process GO:0016020membrane GO:0006633fatty acid biosynthetic process


Orthologs (automatic annotation)
TAIR AT1G68530 : 3-ketoacyl-CoA synthase 6
RAP-DB (Rice) LOC_Os02g49920.1 : 3-ketoacyl-CoA synthase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G108100 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
2 Sobic.004G293800 thioesterase family protein, putative, expressed -
3 Sobic.005G135800 chalcone and stilbene synthases, putative, expressed -
4 Sobic.010G124500 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
5 Sobic.003G071100 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
6 Sobic.007G138800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.010G108001 - K15397: 3-ketoacyl-CoA synthase
8 Sobic.007G195500 thiol protease SEN102 precursor, putative, expressed -
9 Sobic.007G095000 cytochrome P450, putative, expressed -
10 Sobic.006G125600 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
11 Sobic.003G071300 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
12 Sobic.010G108200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
13 Sobic.002G267000 helix-loop-helix DNA-binding domain containing protein, expressed -
14 Sobic.005G135000 chalcone synthase, putative, expressed -
15 Sobic.005G135400 chalcone synthase, putative, expressed -
16 Sobic.003G040400 cytochrome P450, putative, expressed -
17 Sobic.003G206000 THION27 - Plant thionin family protein precursor, expressed -
18 Sobic.009G116300 OsSub46 - Putative Subtilisin homologue, expressed -
19 Sobic.001G332050 - -
20 Sobic.001G332050 - -


Gene co-expression network
sample Sobic010G108600 Sobic010G108600 Sobic010G108100 Sobic010G108100 Sobic010G108600--Sobic010G108100 Sobic004G293800 Sobic004G293800 Sobic010G108600--Sobic004G293800 Sobic005G135800 Sobic005G135800 Sobic010G108600--Sobic005G135800 Sobic010G124500 Sobic010G124500 Sobic010G108600--Sobic010G124500 Sobic003G071100 Sobic003G071100 Sobic010G108600--Sobic003G071100 Sobic007G138800 Sobic007G138800 Sobic010G108600--Sobic007G138800 Sobic010G108001 Sobic010G108001 Sobic010G108600--Sobic010G108001 Sobic007G195500 Sobic007G195500 Sobic010G108600--Sobic007G195500 Sobic007G095000 Sobic007G095000 Sobic010G108600--Sobic007G095000 Sobic010G108100--Sobic007G195500 Sobic010G108100--Sobic004G293800 Sobic010G108100--Sobic010G108001 Sobic010G108100--Sobic010G108600 Sobic010G108100--Sobic005G135800 Sobic010G108100--Sobic003G071100 Sobic010G108100--Sobic010G124500 Sobic009G116300 Sobic009G116300 Sobic010G108100--Sobic009G116300 Sobic003G206000 Sobic003G206000 Sobic010G108100--Sobic003G206000 Sobic004G293800--Sobic010G108001 Sobic004G293800--Sobic003G071100 Sobic004G293800--Sobic005G135800 Sobic004G293800--Sobic007G195500 Sobic004G293800--Sobic010G124500 Sobic004G293800--Sobic010G108100 Sobic003G071300 Sobic003G071300 Sobic004G293800--Sobic003G071300 Sobic005G135400 Sobic005G135400 Sobic004G293800--Sobic005G135400 Sobic010G108200 Sobic010G108200 Sobic004G293800--Sobic010G108200 Sobic005G135800--Sobic010G124500 Sobic005G135800--Sobic003G071100 Sobic005G135800--Sobic010G108001 Sobic005G135800--Sobic003G071300 Sobic005G135800--Sobic004G293800 Sobic005G135800--Sobic007G195500 Sobic006G125600 Sobic006G125600 Sobic005G135800--Sobic006G125600 Sobic005G135800--Sobic005G135400 Sobic005G135800--Sobic009G116300 Sobic010G124500--Sobic005G135800 Sobic010G124500--Sobic003G071100 Sobic010G124500--Sobic010G108001 Sobic010G124500--Sobic003G071300 Sobic010G124500--Sobic006G125600 Sobic010G124500--Sobic004G293800 Sobic010G124500--Sobic007G195500 Sobic010G124500--Sobic005G135400 Sobic010G124500--Sobic007G095000 Sobic003G071100--Sobic010G124500 Sobic003G071100--Sobic005G135800 Sobic003G071100--Sobic010G108001 Sobic003G071100--Sobic003G071300 Sobic003G071100--Sobic004G293800 Sobic003G071100--Sobic005G135400 Sobic003G071100--Sobic006G125600 Sobic003G071100--Sobic007G195500 Sobic003G071100--Sobic009G116300 Sobic002G267000 Sobic002G267000 Sobic007G138800--Sobic002G267000 Sobic007G138800--Sobic010G108600 Sobic010G108301 Sobic010G108301 Sobic007G138800--Sobic010G108301 Sobic005G135000 Sobic005G135000 Sobic007G138800--Sobic005G135000 Sobic007G138800--Sobic010G108100 Sobic007G138800--Sobic005G135800 Sobic007G138800--Sobic010G124500 Sobic007G138800--Sobic007G095000 Sobic007G138800--Sobic007G195500 Sobic010G108001--Sobic003G071100 Sobic010G108001--Sobic005G135800 Sobic010G108001--Sobic007G195500 Sobic010G108001--Sobic004G293800 Sobic010G108001--Sobic010G124500 Sobic010G108001--Sobic003G206000 Sobic010G108001--Sobic009G116300 Sobic010G200000 Sobic010G200000 Sobic010G108001--Sobic010G200000 Sobic001G332050 Sobic001G332050 Sobic010G108001--Sobic001G332050 Sobic007G195500--Sobic010G108001 Sobic007G195500--Sobic010G108100 Sobic007G195500--Sobic005G135800 Sobic007G195500--Sobic009G116300 Sobic007G195500--Sobic003G206000 Sobic003G206300 Sobic003G206300 Sobic007G195500--Sobic003G206300 Sobic007G195500--Sobic010G200000 Sobic007G195500--Sobic001G332050 Sobic007G095000--Sobic006G125600 Sobic007G095000--Sobic005G135800 Sobic007G095000--Sobic010G124500 Sobic007G095000--Sobic003G071300 Sobic007G095000--Sobic003G071100 Sobic007G095000--Sobic010G108200 Sobic007G095000--Sobic010G108001 Sobic007G095000--Sobic005G135400 Sobic007G095000--Sobic004G293800
Octagon: transcription factors


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