Gene annotation
Transcriptome id Sobic.002G267000.1
Synonym Sb02g030110
Functional annotation helix-loop-helix DNA-binding domain containing protein, expressed
UniProt C5X606
Pfam PF00010
Panther DB PTHR11514 PTHR11514:SF55
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G46760 : Basic helix-loop-helix (bHLH) DNA-binding family protein
RAP-DB (Rice) LOC_Os09g34330.1 : helix-loop-helix DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a047661
Brachypodium KQJ91080 , KQJ99242 , KQJ99243 , KQJ99241
Barley HORVU5Hr1G080080.1 , HORVU5Hr1G079900.1 , HORVU5Hr1G080040.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G138800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.010G108301 - K15397: 3-ketoacyl-CoA synthase
3 Sobic.010G108600 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
4 Sobic.005G135000 chalcone synthase, putative, expressed -
5 Sobic.010G108100 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
6 Sobic.004G293800 thioesterase family protein, putative, expressed -
7 Sobic.005G135800 chalcone and stilbene synthases, putative, expressed -
8 Sobic.010G124500 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
9 Sobic.007G095000 cytochrome P450, putative, expressed -
10 Sobic.007G195500 thiol protease SEN102 precursor, putative, expressed -
11 Sobic.003G071100 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
12 Sobic.010G108001 - K15397: 3-ketoacyl-CoA synthase
13 Sobic.008G005400 cysteine-rich receptor-like protein kinase 4 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
14 Sobic.006G125600 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
15 Sobic.003G071300 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
16 Sobic.010G108200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
17 Sobic.001G173100 cytochrome P450, putative, expressed -
18 Sobic.005G135400 chalcone synthase, putative, expressed -
19 Sobic.003G040400 cytochrome P450, putative, expressed -
20 Sobic.003G206000 THION27 - Plant thionin family protein precursor, expressed -


Gene co-expression network
sample Sobic002G267000 Sobic002G267000 Sobic007G138800 Sobic007G138800 Sobic002G267000--Sobic007G138800 Sobic010G108301 Sobic010G108301 Sobic002G267000--Sobic010G108301 Sobic010G108600 Sobic010G108600 Sobic002G267000--Sobic010G108600 Sobic005G135000 Sobic005G135000 Sobic002G267000--Sobic005G135000 Sobic010G108100 Sobic010G108100 Sobic002G267000--Sobic010G108100 Sobic004G293800 Sobic004G293800 Sobic002G267000--Sobic004G293800 Sobic005G135800 Sobic005G135800 Sobic002G267000--Sobic005G135800 Sobic010G124500 Sobic010G124500 Sobic002G267000--Sobic010G124500 Sobic007G095000 Sobic007G095000 Sobic002G267000--Sobic007G095000 Sobic007G138800--Sobic002G267000 Sobic007G138800--Sobic010G108600 Sobic007G138800--Sobic010G108301 Sobic007G138800--Sobic005G135000 Sobic007G138800--Sobic010G108100 Sobic007G138800--Sobic005G135800 Sobic007G138800--Sobic010G124500 Sobic007G138800--Sobic007G095000 Sobic007G195500 Sobic007G195500 Sobic007G138800--Sobic007G195500 Sobic010G108301--Sobic002G267000 Sobic010G108301--Sobic007G138800 Sobic010G108301--Sobic010G108600 Sobic010G108301--Sobic005G135000 Sobic008G005400 Sobic008G005400 Sobic010G108301--Sobic008G005400 Sobic010G108301--Sobic010G108100 Sobic001G173100 Sobic001G173100 Sobic010G108301--Sobic001G173100 Sobic010G108301--Sobic007G095000 Sobic010G108301--Sobic004G293800 Sobic010G108600--Sobic010G108100 Sobic010G108600--Sobic004G293800 Sobic010G108600--Sobic005G135800 Sobic010G108600--Sobic010G124500 Sobic003G071100 Sobic003G071100 Sobic010G108600--Sobic003G071100 Sobic010G108600--Sobic007G138800 Sobic010G108001 Sobic010G108001 Sobic010G108600--Sobic010G108001 Sobic010G108600--Sobic007G195500 Sobic010G108600--Sobic007G095000 Sobic005G135000--Sobic010G108600 Sobic005G135000--Sobic007G138800 Sobic005G135000--Sobic010G108100 Sobic005G135000--Sobic002G267000 Sobic005G135000--Sobic007G195500 Sobic005G135000--Sobic004G293800 Sobic005G135000--Sobic005G135800 Sobic005G135000--Sobic010G124500 Sobic005G135000--Sobic010G108001 Sobic010G108100--Sobic007G195500 Sobic010G108100--Sobic004G293800 Sobic010G108100--Sobic010G108001 Sobic010G108100--Sobic010G108600 Sobic010G108100--Sobic005G135800 Sobic010G108100--Sobic003G071100 Sobic010G108100--Sobic010G124500 Sobic009G116300 Sobic009G116300 Sobic010G108100--Sobic009G116300 Sobic003G206000 Sobic003G206000 Sobic010G108100--Sobic003G206000 Sobic004G293800--Sobic010G108001 Sobic004G293800--Sobic003G071100 Sobic004G293800--Sobic005G135800 Sobic004G293800--Sobic007G195500 Sobic004G293800--Sobic010G124500 Sobic004G293800--Sobic010G108100 Sobic003G071300 Sobic003G071300 Sobic004G293800--Sobic003G071300 Sobic005G135400 Sobic005G135400 Sobic004G293800--Sobic005G135400 Sobic010G108200 Sobic010G108200 Sobic004G293800--Sobic010G108200 Sobic005G135800--Sobic010G124500 Sobic005G135800--Sobic003G071100 Sobic005G135800--Sobic010G108001 Sobic005G135800--Sobic003G071300 Sobic005G135800--Sobic004G293800 Sobic005G135800--Sobic007G195500 Sobic006G125600 Sobic006G125600 Sobic005G135800--Sobic006G125600 Sobic005G135800--Sobic005G135400 Sobic005G135800--Sobic009G116300 Sobic010G124500--Sobic005G135800 Sobic010G124500--Sobic003G071100 Sobic010G124500--Sobic010G108001 Sobic010G124500--Sobic003G071300 Sobic010G124500--Sobic006G125600 Sobic010G124500--Sobic004G293800 Sobic010G124500--Sobic007G195500 Sobic010G124500--Sobic005G135400 Sobic010G124500--Sobic007G095000 Sobic007G095000--Sobic006G125600 Sobic007G095000--Sobic005G135800 Sobic007G095000--Sobic010G124500 Sobic007G095000--Sobic003G071300 Sobic007G095000--Sobic003G071100 Sobic007G095000--Sobic010G108200 Sobic007G095000--Sobic010G108001 Sobic007G095000--Sobic005G135400 Sobic007G095000--Sobic004G293800
Octagon: transcription factors


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