Gene annotation
Transcriptome id Sobic.002G394700.1
Synonym AtCXE18, CXE18, Sb02g041000
Functional annotation gibberellin receptor GID1L2, putative, expressed
UniProt A0A1W0W7I6
Pfam PF12695
Panther DB PTHR23024 PTHR23024:SF133
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G23530 : carboxyesterase 18
RAP-DB (Rice) LOC_Os07g44860.1 : gibberellin receptor GID1L2, putative, expressed
MaizeGDB (Corn) Zm00025a048950 , Zm00025a048951 , Zm00025a048957 , Zm00025a048955
Brachypodium KQK14954 , KQK14951
Barley HORVU1Hr1G037570.1 , HORVU1Hr1G037570.2
Wheat -
Populus -


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cDNA sequences
Sobic.002G394700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G108200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
2 Sobic.006G125600 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
3 Sobic.003G071300 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
4 Sobic.007G095000 cytochrome P450, putative, expressed -
5 Sobic.010G124500 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
6 Sobic.003G071100 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
7 Sobic.005G135800 chalcone and stilbene synthases, putative, expressed -
8 Sobic.005G135400 chalcone synthase, putative, expressed -
9 Sobic.010G108600 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
10 Sobic.004G293800 thioesterase family protein, putative, expressed -
11 Sobic.010G108001 - K15397: 3-ketoacyl-CoA synthase
12 Sobic.001G147650 - -
13 Sobic.010G159500 LTPL5 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
14 Sobic.007G064600 cytochrome P450, putative, expressed -
15 Sobic.010G108100 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
16 Sobic.007G138800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
17 Sobic.003G206000 THION27 - Plant thionin family protein precursor, expressed -
18 Sobic.001G332050 - -
19 Sobic.001G332050 - -
20 Sobic.001G332050 - -


Gene co-expression network
sample Sobic002G394700 Sobic002G394700 Sobic010G108200 Sobic010G108200 Sobic002G394700--Sobic010G108200 Sobic006G125600 Sobic006G125600 Sobic002G394700--Sobic006G125600 Sobic003G071300 Sobic003G071300 Sobic002G394700--Sobic003G071300 Sobic007G095000 Sobic007G095000 Sobic002G394700--Sobic007G095000 Sobic010G124500 Sobic010G124500 Sobic002G394700--Sobic010G124500 Sobic003G071100 Sobic003G071100 Sobic002G394700--Sobic003G071100 Sobic005G135800 Sobic005G135800 Sobic002G394700--Sobic005G135800 Sobic005G135400 Sobic005G135400 Sobic002G394700--Sobic005G135400 Sobic010G108600 Sobic010G108600 Sobic002G394700--Sobic010G108600 Sobic010G108200--Sobic003G071300 Sobic010G108200--Sobic006G125600 Sobic010G108200--Sobic003G071100 Sobic010G108200--Sobic005G135400 Sobic010G108200--Sobic010G124500 Sobic004G293800 Sobic004G293800 Sobic010G108200--Sobic004G293800 Sobic010G108200--Sobic005G135800 Sobic010G108001 Sobic010G108001 Sobic010G108200--Sobic010G108001 Sobic010G108200--Sobic007G095000 Sobic006G125600--Sobic003G071300 Sobic006G125600--Sobic010G124500 Sobic006G125600--Sobic003G071100 Sobic006G125600--Sobic005G135800 Sobic006G125600--Sobic010G108200 Sobic006G125600--Sobic007G095000 Sobic006G125600--Sobic005G135400 Sobic006G125600--Sobic010G108001 Sobic006G125600--Sobic004G293800 Sobic003G071300--Sobic003G071100 Sobic003G071300--Sobic006G125600 Sobic003G071300--Sobic010G108200 Sobic003G071300--Sobic010G124500 Sobic003G071300--Sobic005G135800 Sobic003G071300--Sobic005G135400 Sobic003G071300--Sobic010G108001 Sobic003G071300--Sobic004G293800 Sobic003G071300--Sobic007G095000 Sobic007G095000--Sobic006G125600 Sobic007G095000--Sobic005G135800 Sobic007G095000--Sobic010G124500 Sobic007G095000--Sobic003G071300 Sobic007G095000--Sobic003G071100 Sobic007G095000--Sobic010G108200 Sobic007G095000--Sobic010G108001 Sobic007G095000--Sobic005G135400 Sobic007G095000--Sobic004G293800 Sobic010G124500--Sobic005G135800 Sobic010G124500--Sobic003G071100 Sobic010G124500--Sobic010G108001 Sobic010G124500--Sobic003G071300 Sobic010G124500--Sobic006G125600 Sobic010G124500--Sobic004G293800 Sobic007G195500 Sobic007G195500 Sobic010G124500--Sobic007G195500 Sobic010G124500--Sobic005G135400 Sobic010G124500--Sobic007G095000 Sobic003G071100--Sobic010G124500 Sobic003G071100--Sobic005G135800 Sobic003G071100--Sobic010G108001 Sobic003G071100--Sobic003G071300 Sobic003G071100--Sobic004G293800 Sobic003G071100--Sobic005G135400 Sobic003G071100--Sobic006G125600 Sobic003G071100--Sobic007G195500 Sobic009G116300 Sobic009G116300 Sobic003G071100--Sobic009G116300 Sobic005G135800--Sobic010G124500 Sobic005G135800--Sobic003G071100 Sobic005G135800--Sobic010G108001 Sobic005G135800--Sobic003G071300 Sobic005G135800--Sobic004G293800 Sobic005G135800--Sobic007G195500 Sobic005G135800--Sobic006G125600 Sobic005G135800--Sobic005G135400 Sobic005G135800--Sobic009G116300 Sobic005G135400--Sobic003G071100 Sobic005G135400--Sobic003G071300 Sobic010G159500 Sobic010G159500 Sobic005G135400--Sobic010G159500 Sobic005G135400--Sobic010G108001 Sobic003G206300 Sobic003G206300 Sobic005G135400--Sobic003G206300 Sobic002G129600 Sobic002G129600 Sobic005G135400--Sobic002G129600 Sobic005G135400--Sobic009G116300 Sobic010G200000 Sobic010G200000 Sobic005G135400--Sobic010G200000 Sobic001G332050 Sobic001G332050 Sobic005G135400--Sobic001G332050 Sobic010G108100 Sobic010G108100 Sobic010G108600--Sobic010G108100 Sobic010G108600--Sobic004G293800 Sobic010G108600--Sobic005G135800 Sobic010G108600--Sobic010G124500 Sobic010G108600--Sobic003G071100 Sobic007G138800 Sobic007G138800 Sobic010G108600--Sobic007G138800 Sobic010G108600--Sobic010G108001 Sobic010G108600--Sobic007G195500 Sobic010G108600--Sobic007G095000
Octagon: transcription factors


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