Gene annotation
Transcriptome id Sobic.001G147650.1,Sobic.001G147650.2
Synonym -
Functional annotation -
UniProt A0A120GUR4 , C6JS99 , A0A1B6QIZ7 , A0A1Z5S5Z4
Pfam PF00067
Panther DB PTHR24286 PTHR24286:SF81
NCBI CDD KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT1G12740 : cytochrome P450, family 87, subfamily A, polypeptide 2
RAP-DB (Rice) LOC_Os03g45619.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a017198 , Zm00025a017295
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G135400 chalcone synthase, putative, expressed -
2 Sobic.010G159500 LTPL5 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
3 Sobic.010G108200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
4 Sobic.003G071300 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
5 Sobic.004G293800 thioesterase family protein, putative, expressed -
6 Sobic.003G071100 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
7 Sobic.010G108001 - K15397: 3-ketoacyl-CoA synthase
8 Sobic.001G332050 - -
9 Sobic.001G332050 - -
10 Sobic.001G332050 - -
11 Sobic.001G332050 - -
12 Sobic.001G332050 - -
13 Sobic.001G332050 - -
14 Sobic.001G332050 - -
15 Sobic.001G332050 - -
16 Sobic.001G332050 - -
17 Sobic.001G332050 - -
18 Sobic.001G332050 - -
19 Sobic.001G332050 - -
20 Sobic.001G332050 - -


Gene co-expression network
sample Sobic001G147650 Sobic001G147650 Sobic005G135400 Sobic005G135400 Sobic001G147650--Sobic005G135400 Sobic010G159500 Sobic010G159500 Sobic001G147650--Sobic010G159500 Sobic010G108200 Sobic010G108200 Sobic001G147650--Sobic010G108200 Sobic003G071300 Sobic003G071300 Sobic001G147650--Sobic003G071300 Sobic004G293800 Sobic004G293800 Sobic001G147650--Sobic004G293800 Sobic003G071100 Sobic003G071100 Sobic001G147650--Sobic003G071100 Sobic010G108001 Sobic010G108001 Sobic001G147650--Sobic010G108001 Sobic001G332050 Sobic001G332050 Sobic001G147650--Sobic001G332050 Sobic005G135400--Sobic003G071100 Sobic005G135400--Sobic003G071300 Sobic005G135400--Sobic010G159500 Sobic005G135400--Sobic010G108001 Sobic003G206300 Sobic003G206300 Sobic005G135400--Sobic003G206300 Sobic002G129600 Sobic002G129600 Sobic005G135400--Sobic002G129600 Sobic009G116300 Sobic009G116300 Sobic005G135400--Sobic009G116300 Sobic010G200000 Sobic010G200000 Sobic005G135400--Sobic010G200000 Sobic005G135400--Sobic001G332050 Sobic008G138300 Sobic008G138300 Sobic010G159500--Sobic008G138300 Sobic010G159500--Sobic009G116300 Sobic010G159500--Sobic003G206300 Sobic010G159500--Sobic010G200000 Sobic003G206000 Sobic003G206000 Sobic010G159500--Sobic003G206000 Sobic010G159500--Sobic001G332050 Sobic010G108200--Sobic003G071300 Sobic006G125600 Sobic006G125600 Sobic010G108200--Sobic006G125600 Sobic010G108200--Sobic003G071100 Sobic010G108200--Sobic005G135400 Sobic010G124500 Sobic010G124500 Sobic010G108200--Sobic010G124500 Sobic010G108200--Sobic004G293800 Sobic005G135800 Sobic005G135800 Sobic010G108200--Sobic005G135800 Sobic010G108200--Sobic010G108001 Sobic007G095000 Sobic007G095000 Sobic010G108200--Sobic007G095000 Sobic003G071300--Sobic003G071100 Sobic003G071300--Sobic006G125600 Sobic003G071300--Sobic010G108200 Sobic003G071300--Sobic010G124500 Sobic003G071300--Sobic005G135800 Sobic003G071300--Sobic005G135400 Sobic003G071300--Sobic010G108001 Sobic003G071300--Sobic004G293800 Sobic003G071300--Sobic007G095000 Sobic004G293800--Sobic010G108001 Sobic004G293800--Sobic003G071100 Sobic004G293800--Sobic005G135800 Sobic007G195500 Sobic007G195500 Sobic004G293800--Sobic007G195500 Sobic004G293800--Sobic010G124500 Sobic010G108100 Sobic010G108100 Sobic004G293800--Sobic010G108100 Sobic004G293800--Sobic003G071300 Sobic004G293800--Sobic005G135400 Sobic004G293800--Sobic010G108200 Sobic003G071100--Sobic010G124500 Sobic003G071100--Sobic005G135800 Sobic003G071100--Sobic010G108001 Sobic003G071100--Sobic003G071300 Sobic003G071100--Sobic004G293800 Sobic003G071100--Sobic005G135400 Sobic003G071100--Sobic006G125600 Sobic003G071100--Sobic007G195500 Sobic003G071100--Sobic009G116300 Sobic010G108001--Sobic003G071100 Sobic010G108001--Sobic005G135800 Sobic010G108001--Sobic007G195500 Sobic010G108001--Sobic004G293800 Sobic010G108001--Sobic010G124500 Sobic010G108001--Sobic003G206000 Sobic010G108001--Sobic009G116300 Sobic010G108001--Sobic010G200000 Sobic010G108001--Sobic001G332050 Sobic001G332050--Sobic001G332050
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.