Gene annotation
Transcriptome id Sobic.006G166800.1
Synonym Sb06g024270
Functional annotation plastocyanin-like domain containing protein, putative, expressed
UniProt C5YD45
Pfam PF02298
Panther DB PTHR33021 PTHR33021:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT5G07475 : Cupredoxin superfamily protein
RAP-DB (Rice) LOC_Os04g46130.1 : plastocyanin-like domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a010353
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G166800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G027200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
2 Sobic.009G162800 laccase precursor protein, putative, expressed K05909: laccase
3 Sobic.001G510200 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
4 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
5 Sobic.003G153400 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.002G394700 gibberellin receptor GID1L2, putative, expressed -
7 Sobic.010G196400 expressed protein -
8 Sobic.007G043800 expressed protein -
9 Sobic.009G241600 Expressed in older stem(PubMedID : 28649278)@zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K18753: butyrate response factor
10 Sobic.010G199700 STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed -
11 Sobic.006G125600 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
12 Sobic.007G095000 cytochrome P450, putative, expressed -
13 Sobic.008G173200 ZOS12-10 - C2H2 zinc finger protein, expressed -
14 Sobic.003G430000 eukaryotic aspartyl protease domain containing protein, expressed -
15 Sobic.010G108200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
16 Sobic.007G138800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
17 Sobic.001G266200 POEI14 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
18 Sobic.003G071300 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
19 Sobic.010G124500 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
20 Sobic.005G135800 chalcone and stilbene synthases, putative, expressed -


Gene co-expression network
sample Sobic006G166800 Sobic006G166800 Sobic007G027200 Sobic007G027200 Sobic006G166800--Sobic007G027200 Sobic009G162800 Sobic009G162800 Sobic006G166800--Sobic009G162800 Sobic001G510200 Sobic001G510200 Sobic006G166800--Sobic001G510200 Sobic003G352800 Sobic003G352800 Sobic006G166800--Sobic003G352800 Sobic003G153400 Sobic003G153400 Sobic006G166800--Sobic003G153400 Sobic002G394700 Sobic002G394700 Sobic006G166800--Sobic002G394700 Sobic010G196400 Sobic010G196400 Sobic006G166800--Sobic010G196400 Sobic007G043800 Sobic007G043800 Sobic006G166800--Sobic007G043800 Sobic009G241600 Sobic009G241600 Sobic006G166800--Sobic009G241600 Sobic007G027200--Sobic006G166800 Sobic007G027200--Sobic001G510200 Sobic007G027200--Sobic009G241600 Sobic007G027200--Sobic002G394700 Sobic007G027200--Sobic003G153400 Sobic010G199700 Sobic010G199700 Sobic007G027200--Sobic010G199700 Sobic007G027200--Sobic003G352800 Sobic007G027200--Sobic009G162800 Sobic007G027200--Sobic007G043800 Sobic009G162800--Sobic006G166800 Sobic009G162800--Sobic003G352800 Sobic009G162800--Sobic010G196400 Sobic009G162800--Sobic007G027200 Sobic009G162800--Sobic001G510200 Sobic009G162800--Sobic003G153400 Sobic009G162800--Sobic002G394700 Sobic003G276200 Sobic003G276200 Sobic009G162800--Sobic003G276200 Sobic009G162800--Sobic009G241600 Sobic001G510200--Sobic007G027200 Sobic001G510200--Sobic006G166800 Sobic001G510200--Sobic002G394700 Sobic001G221400 Sobic001G221400 Sobic001G510200--Sobic001G221400 Sobic004G167000 Sobic004G167000 Sobic001G510200--Sobic004G167000 Sobic002G039400 Sobic002G039400 Sobic001G510200--Sobic002G039400 Sobic006G125600 Sobic006G125600 Sobic001G510200--Sobic006G125600 Sobic010G108200 Sobic010G108200 Sobic001G510200--Sobic010G108200 Sobic008G008200 Sobic008G008200 Sobic001G510200--Sobic008G008200 Sobic003G352800--Sobic006G166800 Sobic003G352800--Sobic009G162800 Sobic003G352800--Sobic007G027200 Sobic002G003200 Sobic002G003200 Sobic003G352800--Sobic002G003200 Sobic003G352800--Sobic009G241600 Sobic008G059800 Sobic008G059800 Sobic003G352800--Sobic008G059800 Sobic009G153800 Sobic009G153800 Sobic003G352800--Sobic009G153800 Sobic003G427900 Sobic003G427900 Sobic003G352800--Sobic003G427900 Sobic003G352800--Sobic010G196400 Sobic003G153400--Sobic006G166800 Sobic003G153400--Sobic007G027200 Sobic008G173200 Sobic008G173200 Sobic003G153400--Sobic008G173200 Sobic003G153400--Sobic010G199700 Sobic009G151000 Sobic009G151000 Sobic003G153400--Sobic009G151000 Sobic003G153400--Sobic010G196400 Sobic003G153400--Sobic009G162800 Sobic003G153400--Sobic007G043800 Sobic010G112800 Sobic010G112800 Sobic003G153400--Sobic010G112800 Sobic002G394700--Sobic010G108200 Sobic002G394700--Sobic006G125600 Sobic003G071300 Sobic003G071300 Sobic002G394700--Sobic003G071300 Sobic007G095000 Sobic007G095000 Sobic002G394700--Sobic007G095000 Sobic010G124500 Sobic010G124500 Sobic002G394700--Sobic010G124500 Sobic003G071100 Sobic003G071100 Sobic002G394700--Sobic003G071100 Sobic005G135800 Sobic005G135800 Sobic002G394700--Sobic005G135800 Sobic005G135400 Sobic005G135400 Sobic002G394700--Sobic005G135400 Sobic010G108600 Sobic010G108600 Sobic002G394700--Sobic010G108600 Sobic010G196400--Sobic009G162800 Sobic001G066900 Sobic001G066900 Sobic010G196400--Sobic001G066900 Sobic001G265900 Sobic001G265900 Sobic010G196400--Sobic001G265900 Sobic010G196400--Sobic006G166800 Sobic001G307300 Sobic001G307300 Sobic010G196400--Sobic001G307300 Sobic010G196400--Sobic003G153400 Sobic001G275600 Sobic001G275600 Sobic010G196400--Sobic001G275600 Sobic010G196400--Sobic009G151000 Sobic001G250200 Sobic001G250200 Sobic010G196400--Sobic001G250200 Sobic007G043800--Sobic002G394700 Sobic007G043800--Sobic006G125600 Sobic007G043800--Sobic007G095000 Sobic007G043800--Sobic003G071300 Sobic007G043800--Sobic010G108200 Sobic007G043800--Sobic005G135400 Sobic007G043800--Sobic010G124500 Sobic007G043800--Sobic003G071100 Sobic007G043800--Sobic005G135800 Sobic003G236701 Sobic003G236701 Sobic009G241600--Sobic003G236701 Sobic009G241600--Sobic007G027200 Sobic006G066500 Sobic006G066500 Sobic009G241600--Sobic006G066500 Sobic009G241600--Sobic008G059800 Sobic002G164600 Sobic002G164600 Sobic009G241600--Sobic002G164600 Sobic009G241600--Sobic010G199700 Sobic008G112200 Sobic008G112200 Sobic009G241600--Sobic008G112200 Sobic003G112200 Sobic003G112200 Sobic009G241600--Sobic003G112200 Sobic009G241600--Sobic006G166800
Octagon: transcription factors


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