Gene annotation
Transcriptome id Sobic.003G153400.1
Synonym Sb03g013350
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt C5XJQ5
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF162
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT1G09390 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g22640.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a024420 , Zm00025a024422 , Zm00025a017868 , Zm00025a049955 , Zm00025a024419 , Zm00025a043630
Brachypodium KQK04211 , KQK04207 , KQK04208 , KQK15479 , PNT70453
Barley HORVU3Hr1G058610.5 , HORVU3Hr1G058610.4 , HORVU3Hr1G058610.7 , HORVU3Hr1G058610.6 , HORVU3Hr1G058610.1 , HORVU3Hr1G058610.2 , HORVU3Hr1G058610.9 , HORVU3Hr1G058610.8 , HORVU2Hr1G101510.1 , HORVU2Hr1G101510.6 , HORVU3Hr1G058610.11 , HORVU3Hr1G058610.10 , HORVU3Hr1G058610.12 , HORVU2Hr1G101510.2 , HORVU2Hr1G101510.3 , HORVU6Hr1G009850.2 , HORVU2Hr1G101510.7 , HORVU2Hr1G101510.4 , HORVU2Hr1G101510.5 , HORVU2Hr1G101510.8 , HORVU7Hr1G025320.1
Wheat TraesCS2A02G192100 , TraesCS2A02G192100 , TraesCS7B02G233800 , TraesCS6A02G051500 , TraesCS3A02G235500 , TraesCS1D02G054100 , TraesCS3D02G235600 , TraesCS2B02G214000 , TraesCS2B02G214000 , TraesCS2B02G214000 , TraesCS2D02G433400 , TraesCS2D02G433400 , TraesCSU02G110500 , TraesCS2D02G195400 , TraesCS2D02G195400 , TraesCS2D02G195400 , TraesCS6A02G277200 , TraesCS1D02G054200 , TraesCS2A02G436500 , TraesCS1A02G052300 , TraesCS1B02G261700 , TraesCS6D02G257800 , TraesCS6D02G257800 , TraesCS1B02G069200 , TraesCS6B02G068700 , TraesCS2B02G456700
Populus -


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cDNA sequences
Sobic.003G153400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G166800 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.007G027200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
3 Sobic.008G173200 ZOS12-10 - C2H2 zinc finger protein, expressed -
4 Sobic.010G199700 STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed -
5 Sobic.009G151000 Subtilase family protein("PubMedID : 26759170,PubMedID : 24597475")@OsSub47 - Putative Subtilisin homologue, expressed -
6 Sobic.010G196400 expressed protein -
7 Sobic.009G162800 laccase precursor protein, putative, expressed K05909: laccase
8 Sobic.007G043800 expressed protein -
9 Sobic.010G112800 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
10 Sobic.009G241600 Expressed in older stem(PubMedID : 28649278)@zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K18753: butyrate response factor
11 Sobic.001G510200 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
12 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
13 Sobic.001G275600 peptide transporter PTR2, putative, expressed -
14 Sobic.003G112200 Cupin domain containing protein, expressed -
15 Sobic.002G394700 gibberellin receptor GID1L2, putative, expressed -
16 Sobic.003G276200 - -
17 Sobic.001G066900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsMan06 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
18 Sobic.008G112200 Expressed in middle stem(PubMedID : 28649278)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.003G427900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
20 Sobic.003G236701 - -


Gene co-expression network
sample Sobic003G153400 Sobic003G153400 Sobic006G166800 Sobic006G166800 Sobic003G153400--Sobic006G166800 Sobic007G027200 Sobic007G027200 Sobic003G153400--Sobic007G027200 Sobic008G173200 Sobic008G173200 Sobic003G153400--Sobic008G173200 Sobic010G199700 Sobic010G199700 Sobic003G153400--Sobic010G199700 Sobic009G151000 Sobic009G151000 Sobic003G153400--Sobic009G151000 Sobic010G196400 Sobic010G196400 Sobic003G153400--Sobic010G196400 Sobic009G162800 Sobic009G162800 Sobic003G153400--Sobic009G162800 Sobic007G043800 Sobic007G043800 Sobic003G153400--Sobic007G043800 Sobic010G112800 Sobic010G112800 Sobic003G153400--Sobic010G112800 Sobic006G166800--Sobic007G027200 Sobic006G166800--Sobic009G162800 Sobic001G510200 Sobic001G510200 Sobic006G166800--Sobic001G510200 Sobic003G352800 Sobic003G352800 Sobic006G166800--Sobic003G352800 Sobic006G166800--Sobic003G153400 Sobic002G394700 Sobic002G394700 Sobic006G166800--Sobic002G394700 Sobic006G166800--Sobic010G196400 Sobic006G166800--Sobic007G043800 Sobic009G241600 Sobic009G241600 Sobic006G166800--Sobic009G241600 Sobic007G027200--Sobic006G166800 Sobic007G027200--Sobic001G510200 Sobic007G027200--Sobic009G241600 Sobic007G027200--Sobic002G394700 Sobic007G027200--Sobic003G153400 Sobic007G027200--Sobic010G199700 Sobic007G027200--Sobic003G352800 Sobic007G027200--Sobic009G162800 Sobic007G027200--Sobic007G043800 Sobic008G173200--Sobic009G151000 Sobic008G173200--Sobic003G153400 Sobic001G275600 Sobic001G275600 Sobic008G173200--Sobic001G275600 Sobic008G173200--Sobic007G043800 Sobic008G173200--Sobic006G166800 Sobic008G173200--Sobic007G027200 Sobic008G173200--Sobic009G162800 Sobic008G173200--Sobic010G196400 Sobic008G163000 Sobic008G163000 Sobic008G173200--Sobic008G163000 Sobic010G199700--Sobic009G241600 Sobic008G112200 Sobic008G112200 Sobic010G199700--Sobic008G112200 Sobic010G199700--Sobic007G027200 Sobic008G059800 Sobic008G059800 Sobic010G199700--Sobic008G059800 Sobic010G199700--Sobic003G153400 Sobic001G468300 Sobic001G468300 Sobic010G199700--Sobic001G468300 Sobic003G236701 Sobic003G236701 Sobic010G199700--Sobic003G236701 Sobic010G199700--Sobic006G166800 Sobic009G153800 Sobic009G153800 Sobic010G199700--Sobic009G153800 Sobic009G151000--Sobic001G275600 Sobic009G151000--Sobic008G173200 Sobic009G151000--Sobic003G153400 Sobic009G151000--Sobic010G196400 Sobic003G108000 Sobic003G108000 Sobic009G151000--Sobic003G108000 Sobic001G307300 Sobic001G307300 Sobic009G151000--Sobic001G307300 Sobic006G001000 Sobic006G001000 Sobic009G151000--Sobic006G001000 Sobic001G336800 Sobic001G336800 Sobic009G151000--Sobic001G336800 Sobic009G070600 Sobic009G070600 Sobic009G151000--Sobic009G070600 Sobic010G196400--Sobic009G162800 Sobic001G066900 Sobic001G066900 Sobic010G196400--Sobic001G066900 Sobic001G265900 Sobic001G265900 Sobic010G196400--Sobic001G265900 Sobic010G196400--Sobic006G166800 Sobic010G196400--Sobic001G307300 Sobic010G196400--Sobic003G153400 Sobic010G196400--Sobic001G275600 Sobic010G196400--Sobic009G151000 Sobic001G250200 Sobic001G250200 Sobic010G196400--Sobic001G250200 Sobic009G162800--Sobic006G166800 Sobic009G162800--Sobic003G352800 Sobic009G162800--Sobic010G196400 Sobic009G162800--Sobic007G027200 Sobic009G162800--Sobic001G510200 Sobic009G162800--Sobic003G153400 Sobic009G162800--Sobic002G394700 Sobic003G276200 Sobic003G276200 Sobic009G162800--Sobic003G276200 Sobic009G162800--Sobic009G241600 Sobic007G043800--Sobic002G394700 Sobic006G125600 Sobic006G125600 Sobic007G043800--Sobic006G125600 Sobic007G095000 Sobic007G095000 Sobic007G043800--Sobic007G095000 Sobic003G071300 Sobic003G071300 Sobic007G043800--Sobic003G071300 Sobic010G108200 Sobic010G108200 Sobic007G043800--Sobic010G108200 Sobic005G135400 Sobic005G135400 Sobic007G043800--Sobic005G135400 Sobic010G124500 Sobic010G124500 Sobic007G043800--Sobic010G124500 Sobic003G071100 Sobic003G071100 Sobic007G043800--Sobic003G071100 Sobic005G135800 Sobic005G135800 Sobic007G043800--Sobic005G135800 Sobic010G112800--Sobic003G153400 Sobic007G001900 Sobic007G001900 Sobic010G112800--Sobic007G001900 Sobic001G336700 Sobic001G336700 Sobic010G112800--Sobic001G336700 Sobic010G112800--Sobic009G241600 Sobic009G226900 Sobic009G226900 Sobic010G112800--Sobic009G226900 Sobic010G112800--Sobic006G166800 Sobic010G112800--Sobic003G352800 Sobic010G112800--Sobic007G027200 Sobic005G087200 Sobic005G087200 Sobic010G112800--Sobic005G087200
Octagon: transcription factors


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