Gene annotation
Transcriptome id Sobic.001G275600.2,Sobic.001G275600.3,Sobic.001G275600.4,Sobic.001G275600.5
Synonym PTR2, PTR2-B, Sb01g027050, ATPTR2, NTR1, ATPTR2-B
Functional annotation peptide transporter PTR2, putative, expressed
UniProt A0A1Z5S8E6 , A0A1Z5S857 , A0A1Z5S7Y1 , A0A1Z5S7W8
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF175
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT2G02020 : Major facilitator superfamily protein,peptide transporter 2
RAP-DB (Rice) LOC_Os10g02340.1,LOC_Os10g02260.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a003675
Brachypodium KQK15148
Barley -
Wheat TraesCS7D02G378300 , TraesCS6D02G353500 , TraesCS7A02G381700
Populus -


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cDNA sequences
Sobic.001G275600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G151000 Subtilase family protein("PubMedID : 26759170,PubMedID : 24597475")@OsSub47 - Putative Subtilisin homologue, expressed -
2 Sobic.008G163000 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR57 - Auxin-responsive SAUR gene family member, expressed -
3 Sobic.009G215600 expressed protein -
4 Sobic.001G307300 short chain dehydrogenase/reductase protein, putative, expressed -
5 Sobic.006G001000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450 93A2, putative, expressed -
6 Sobic.009G119400 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@glycosyl hydrolases family 17, putative, expressed -
7 Sobic.008G173200 ZOS12-10 - C2H2 zinc finger protein, expressed -
8 Sobic.010G196400 expressed protein -
9 Sobic.002G141100 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.002G209800 ZOS9-11 - C2H2 zinc finger protein, expressed -
11 Sobic.005G200600 dirigent, putative, expressed -
12 Sobic.009G161100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
13 Sobic.009G070600 HAD superfamily phosphatase, putative, expressed -
14 Sobic.001G336800 - -
15 Sobic.003G108000 expressed protein -
16 Sobic.005G029400 strictosidine synthase, putative, expressed -
17 Sobic.004G249400 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
18 Sobic.001G379300 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.003G153400 GDSL-like lipase/acylhydrolase, putative, expressed -
20 Sobic.004G257700 aspartic proteinase nepenthesin-1 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G275600 Sobic001G275600 Sobic009G151000 Sobic009G151000 Sobic001G275600--Sobic009G151000 Sobic008G163000 Sobic008G163000 Sobic001G275600--Sobic008G163000 Sobic009G215600 Sobic009G215600 Sobic001G275600--Sobic009G215600 Sobic001G307300 Sobic001G307300 Sobic001G275600--Sobic001G307300 Sobic006G001000 Sobic006G001000 Sobic001G275600--Sobic006G001000 Sobic009G119400 Sobic009G119400 Sobic001G275600--Sobic009G119400 Sobic008G173200 Sobic008G173200 Sobic001G275600--Sobic008G173200 Sobic010G196400 Sobic010G196400 Sobic001G275600--Sobic010G196400 Sobic002G141100 Sobic002G141100 Sobic001G275600--Sobic002G141100 Sobic009G151000--Sobic001G275600 Sobic009G151000--Sobic008G173200 Sobic003G153400 Sobic003G153400 Sobic009G151000--Sobic003G153400 Sobic009G151000--Sobic010G196400 Sobic003G108000 Sobic003G108000 Sobic009G151000--Sobic003G108000 Sobic009G151000--Sobic001G307300 Sobic009G151000--Sobic006G001000 Sobic001G336800 Sobic001G336800 Sobic009G151000--Sobic001G336800 Sobic009G070600 Sobic009G070600 Sobic009G151000--Sobic009G070600 Sobic008G163000--Sobic001G275600 Sobic008G163000--Sobic006G001000 Sobic008G163000--Sobic009G119400 Sobic004G344200 Sobic004G344200 Sobic008G163000--Sobic004G344200 Sobic008G164900 Sobic008G164900 Sobic008G163000--Sobic008G164900 Sobic008G163000--Sobic009G151000 Sobic008G163000--Sobic010G196400 Sobic002G003200 Sobic002G003200 Sobic008G163000--Sobic002G003200 Sobic008G163000--Sobic003G108000 Sobic009G215600--Sobic002G141100 Sobic008G163200 Sobic008G163200 Sobic009G215600--Sobic008G163200 Sobic004G038300 Sobic004G038300 Sobic009G215600--Sobic004G038300 Sobic002G209800 Sobic002G209800 Sobic009G215600--Sobic002G209800 Sobic002G416950 Sobic002G416950 Sobic009G215600--Sobic002G416950 Sobic004G300800 Sobic004G300800 Sobic009G215600--Sobic004G300800 Sobic004G060700 Sobic004G060700 Sobic009G215600--Sobic004G060700 Sobic001G379300 Sobic001G379300 Sobic009G215600--Sobic001G379300 Sobic002G415300 Sobic002G415300 Sobic009G215600--Sobic002G415300 Sobic001G307300--Sobic009G119400 Sobic001G307300--Sobic001G336800 Sobic001G307300--Sobic010G196400 Sobic001G307300--Sobic001G275600 Sobic001G307300--Sobic009G215600 Sobic002G397400 Sobic002G397400 Sobic001G307300--Sobic002G397400 Sobic002G351000 Sobic002G351000 Sobic001G307300--Sobic002G351000 Sobic001G307300--Sobic009G151000 Sobic001G265900 Sobic001G265900 Sobic001G307300--Sobic001G265900 Sobic006G001000--Sobic001G275600 Sobic006G001000--Sobic008G163000 Sobic006G001000--Sobic009G151000 Sobic006G001000--Sobic002G003200 Sobic003G352800 Sobic003G352800 Sobic006G001000--Sobic003G352800 Sobic006G001000--Sobic003G108000 Sobic006G001000--Sobic009G215600 Sobic006G001000--Sobic004G344200 Sobic003G427900 Sobic003G427900 Sobic006G001000--Sobic003G427900 Sobic009G119400--Sobic002G351000 Sobic009G119400--Sobic002G141100 Sobic009G119400--Sobic001G307300 Sobic009G119400--Sobic009G215600 Sobic007G009600 Sobic007G009600 Sobic009G119400--Sobic007G009600 Sobic009G119400--Sobic004G060700 Sobic007G170800 Sobic007G170800 Sobic009G119400--Sobic007G170800 Sobic009G119400--Sobic008G163200 Sobic005G110436 Sobic005G110436 Sobic009G119400--Sobic005G110436 Sobic008G173200--Sobic009G151000 Sobic008G173200--Sobic003G153400 Sobic008G173200--Sobic001G275600 Sobic007G043800 Sobic007G043800 Sobic008G173200--Sobic007G043800 Sobic006G166800 Sobic006G166800 Sobic008G173200--Sobic006G166800 Sobic007G027200 Sobic007G027200 Sobic008G173200--Sobic007G027200 Sobic009G162800 Sobic009G162800 Sobic008G173200--Sobic009G162800 Sobic008G173200--Sobic010G196400 Sobic008G173200--Sobic008G163000 Sobic010G196400--Sobic009G162800 Sobic001G066900 Sobic001G066900 Sobic010G196400--Sobic001G066900 Sobic010G196400--Sobic001G265900 Sobic010G196400--Sobic006G166800 Sobic010G196400--Sobic001G307300 Sobic010G196400--Sobic003G153400 Sobic010G196400--Sobic001G275600 Sobic010G196400--Sobic009G151000 Sobic001G250200 Sobic001G250200 Sobic010G196400--Sobic001G250200 Sobic001G541300 Sobic001G541300 Sobic002G141100--Sobic001G541300 Sobic005G200600 Sobic005G200600 Sobic002G141100--Sobic005G200600 Sobic002G141100--Sobic007G170800 Sobic002G141100--Sobic004G060700 Sobic002G141100--Sobic002G416950 Sobic006G238100 Sobic006G238100 Sobic002G141100--Sobic006G238100 Sobic002G141100--Sobic007G009600 Sobic003G114200 Sobic003G114200 Sobic002G141100--Sobic003G114200 Sobic002G141100--Sobic001G379300
Octagon: transcription factors


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