Gene annotation
Transcriptome id Sobic.009G119400.1
Synonym Sb09g018750
Functional annotation expressed high in CK60 (an inefficient nitrogen user) (PubMedID : 28697783)
glycosyl hydrolases family 17, putative, expressed
UniProt C5YXB2
Pfam PF00332
Panther DB PTHR32227 PTHR32227:SF119
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT4G16260 : Glycosyl hydrolase superfamily protein
RAP-DB (Rice) LOC_Os05g31140.1 : glycosyl hydrolases family 17, putative, expressed
MaizeGDB (Corn) Zm00025a043498 , Zm00025a026066 , Zm00025a026062 , Zm00025a036936 , Zm00025a043501
Brachypodium KQK05743 , KQK05742 , KQK06584 , KQK06585
Barley HORVU1Hr1G057680.5 , HORVU1Hr1G057680.4 , HORVU1Hr1G057680.6 , HORVU1Hr1G057680.1 , HORVU1Hr1G057680.3 , HORVU1Hr1G057680.2 , HORVU3Hr1G105620.1 , HORVU3Hr1G105620.3 , HORVU3Hr1G105620.2 , HORVU3Hr1G105620.5 , HORVU3Hr1G105620.4 , HORVU3Hr1G105620.6
Wheat TraesCS3B02G530000 , TraesCS3B02G529100 , TraesCS3B02G526000 , TraesCS3B02G530500
Populus -


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cDNA sequences
Sobic.009G119400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G351000 fasciclin domain containing protein, expressed -
2 Sobic.002G141100 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.001G307300 short chain dehydrogenase/reductase protein, putative, expressed -
4 Sobic.009G215600 expressed protein -
5 Sobic.007G009600 expressed protein -
6 Sobic.004G060700 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
7 Sobic.007G170800 Fatty acyl CoA reductase 1 FAR1 (At)(PubMedID : 27208977)@male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
8 Sobic.008G163200 OsSCP9 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
9 Sobic.005G110436 - -
10 Sobic.001G435600 - -
11 Sobic.001G275600 peptide transporter PTR2, putative, expressed -
12 Sobic.005G200600 dirigent, putative, expressed -
13 Sobic.006G038850 - -
14 Sobic.002G415300 - -
15 Sobic.001G127700 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
16 Sobic.002G329500 Beta amylase BAM (Zm)(PubMedID : 27208977)@beta-amylase, putative, expressed K01177: beta-amylase
17 Sobic.002G416950 - -
18 Sobic.002G415400 - -
19 Sobic.009G115050 - -
20 Sobic.008G123600 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase


Gene co-expression network
sample Sobic009G119400 Sobic009G119400 Sobic002G351000 Sobic002G351000 Sobic009G119400--Sobic002G351000 Sobic002G141100 Sobic002G141100 Sobic009G119400--Sobic002G141100 Sobic001G307300 Sobic001G307300 Sobic009G119400--Sobic001G307300 Sobic009G215600 Sobic009G215600 Sobic009G119400--Sobic009G215600 Sobic007G009600 Sobic007G009600 Sobic009G119400--Sobic007G009600 Sobic004G060700 Sobic004G060700 Sobic009G119400--Sobic004G060700 Sobic007G170800 Sobic007G170800 Sobic009G119400--Sobic007G170800 Sobic008G163200 Sobic008G163200 Sobic009G119400--Sobic008G163200 Sobic005G110436 Sobic005G110436 Sobic009G119400--Sobic005G110436 Sobic002G351000--Sobic005G110436 Sobic002G351000--Sobic002G141100 Sobic002G351000--Sobic009G119400 Sobic004G076000 Sobic004G076000 Sobic002G351000--Sobic004G076000 Sobic003G300500 Sobic003G300500 Sobic002G351000--Sobic003G300500 Sobic001G003600 Sobic001G003600 Sobic002G351000--Sobic001G003600 Sobic001G017000 Sobic001G017000 Sobic002G351000--Sobic001G017000 Sobic008G123600 Sobic008G123600 Sobic002G351000--Sobic008G123600 Sobic009G115050 Sobic009G115050 Sobic002G351000--Sobic009G115050 Sobic001G541300 Sobic001G541300 Sobic002G141100--Sobic001G541300 Sobic005G200600 Sobic005G200600 Sobic002G141100--Sobic005G200600 Sobic002G141100--Sobic007G170800 Sobic002G141100--Sobic004G060700 Sobic002G416950 Sobic002G416950 Sobic002G141100--Sobic002G416950 Sobic006G238100 Sobic006G238100 Sobic002G141100--Sobic006G238100 Sobic002G141100--Sobic007G009600 Sobic003G114200 Sobic003G114200 Sobic002G141100--Sobic003G114200 Sobic001G379300 Sobic001G379300 Sobic002G141100--Sobic001G379300 Sobic001G307300--Sobic009G119400 Sobic001G336800 Sobic001G336800 Sobic001G307300--Sobic001G336800 Sobic010G196400 Sobic010G196400 Sobic001G307300--Sobic010G196400 Sobic001G275600 Sobic001G275600 Sobic001G307300--Sobic001G275600 Sobic001G307300--Sobic009G215600 Sobic002G397400 Sobic002G397400 Sobic001G307300--Sobic002G397400 Sobic001G307300--Sobic002G351000 Sobic009G151000 Sobic009G151000 Sobic001G307300--Sobic009G151000 Sobic001G265900 Sobic001G265900 Sobic001G307300--Sobic001G265900 Sobic009G215600--Sobic002G141100 Sobic009G215600--Sobic008G163200 Sobic004G038300 Sobic004G038300 Sobic009G215600--Sobic004G038300 Sobic002G209800 Sobic002G209800 Sobic009G215600--Sobic002G209800 Sobic009G215600--Sobic002G416950 Sobic004G300800 Sobic004G300800 Sobic009G215600--Sobic004G300800 Sobic009G215600--Sobic004G060700 Sobic009G215600--Sobic001G379300 Sobic002G415300 Sobic002G415300 Sobic009G215600--Sobic002G415300 Sobic007G009600--Sobic004G060700 Sobic007G009600--Sobic002G416950 Sobic007G009600--Sobic007G170800 Sobic007G009600--Sobic001G379300 Sobic007G009600--Sobic006G238100 Sobic007G009600--Sobic008G163200 Sobic007G009600--Sobic002G415300 Sobic001G435600 Sobic001G435600 Sobic007G009600--Sobic001G435600 Sobic002G415400 Sobic002G415400 Sobic007G009600--Sobic002G415400 Sobic004G060700--Sobic002G416950 Sobic004G060700--Sobic002G415300 Sobic004G060700--Sobic007G170800 Sobic004G060700--Sobic007G009600 Sobic004G060700--Sobic008G163200 Sobic004G060700--Sobic002G415400 Sobic004G060700--Sobic001G435600 Sobic004G060700--Sobic006G238100 Sobic004G060700--Sobic001G379300 Sobic007G170800--Sobic004G060700 Sobic007G170800--Sobic003G114200 Sobic007G170800--Sobic007G009600 Sobic007G170800--Sobic002G416950 Sobic007G170800--Sobic008G163200 Sobic007G170800--Sobic001G435600 Sobic007G170800--Sobic002G415300 Sobic007G170800--Sobic001G541300 Sobic007G170800--Sobic001G379300 Sobic008G163200--Sobic002G415300 Sobic008G163200--Sobic004G060700 Sobic008G163200--Sobic002G415400 Sobic008G163200--Sobic002G416950 Sobic008G163200--Sobic007G170800 Sobic003G068300 Sobic003G068300 Sobic008G163200--Sobic003G068300 Sobic008G163200--Sobic001G379300 Sobic001G255300 Sobic001G255300 Sobic008G163200--Sobic001G255300 Sobic008G163200--Sobic001G435600 Sobic005G110436--Sobic009G115050 Sobic005G110436--Sobic001G003600 Sobic005G110436--Sobic004G076000 Sobic002G329500 Sobic002G329500 Sobic005G110436--Sobic002G329500 Sobic005G110436--Sobic002G351000 Sobic001G127700 Sobic001G127700 Sobic005G110436--Sobic001G127700 Sobic002G020000 Sobic002G020000 Sobic005G110436--Sobic002G020000 Sobic001G394250 Sobic001G394250 Sobic005G110436--Sobic001G394250 Sobic006G172700 Sobic006G172700 Sobic005G110436--Sobic006G172700
Octagon: transcription factors


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