Gene annotation
Transcriptome id Sobic.003G430000.1
Synonym
Functional annotation eukaryotic aspartyl protease domain containing protein, expressed
UniProt A0A1B6Q8A1
Pfam PF00026
Panther DB PTHR13683:SF353 PTHR13683
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0004190; aspartic-type endopeptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT3G54400 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os01g72510.1 : eukaryotic aspartyl protease domain containing protein, expressed
MaizeGDB (Corn) Zm00025a049030 , Zm00025a039104
Brachypodium KQK11605
Barley HORVU3Hr1G109040.1 , HORVU3Hr1G109040.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G166800 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
3 Sobic.005G146300 Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
4 Sobic.007G027200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
5 Sobic.007G033300 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.010G196400 expressed protein -
7 Sobic.009G162800 laccase precursor protein, putative, expressed K05909: laccase
8 Sobic.010G199700 STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed -
9 Sobic.001G510200 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
10 Sobic.001G266200 POEI14 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
11 Sobic.002G394700 gibberellin receptor GID1L2, putative, expressed -
12 Sobic.007G043800 expressed protein -
13 Sobic.008G112200 Expressed in middle stem(PubMedID : 28649278)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.009G031400 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
15 Sobic.001G066900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsMan06 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
16 Sobic.009G241600 Expressed in older stem(PubMedID : 28649278)@zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K18753: butyrate response factor
17 Sobic.003G153400 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.005G032000 anthocyanin 5-O-glucosyltransferase, putative, expressed -
19 Sobic.002G039400 YABBY domain containing protein, putative, expressed -
20 Sobic.008G173200 ZOS12-10 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic003G430000 Sobic003G430000 Sobic006G166800 Sobic006G166800 Sobic003G430000--Sobic006G166800 Sobic003G352800 Sobic003G352800 Sobic003G430000--Sobic003G352800 Sobic005G146300 Sobic005G146300 Sobic003G430000--Sobic005G146300 Sobic007G027200 Sobic007G027200 Sobic003G430000--Sobic007G027200 Sobic007G033300 Sobic007G033300 Sobic003G430000--Sobic007G033300 Sobic010G196400 Sobic010G196400 Sobic003G430000--Sobic010G196400 Sobic009G162800 Sobic009G162800 Sobic003G430000--Sobic009G162800 Sobic010G199700 Sobic010G199700 Sobic003G430000--Sobic010G199700 Sobic001G510200 Sobic001G510200 Sobic003G430000--Sobic001G510200 Sobic006G166800--Sobic007G027200 Sobic006G166800--Sobic009G162800 Sobic006G166800--Sobic001G510200 Sobic006G166800--Sobic003G352800 Sobic003G153400 Sobic003G153400 Sobic006G166800--Sobic003G153400 Sobic002G394700 Sobic002G394700 Sobic006G166800--Sobic002G394700 Sobic006G166800--Sobic010G196400 Sobic007G043800 Sobic007G043800 Sobic006G166800--Sobic007G043800 Sobic009G241600 Sobic009G241600 Sobic006G166800--Sobic009G241600 Sobic003G352800--Sobic006G166800 Sobic003G352800--Sobic009G162800 Sobic003G352800--Sobic007G027200 Sobic002G003200 Sobic002G003200 Sobic003G352800--Sobic002G003200 Sobic003G352800--Sobic009G241600 Sobic008G059800 Sobic008G059800 Sobic003G352800--Sobic008G059800 Sobic009G153800 Sobic009G153800 Sobic003G352800--Sobic009G153800 Sobic003G427900 Sobic003G427900 Sobic003G352800--Sobic003G427900 Sobic003G352800--Sobic010G196400 Sobic005G146300--Sobic007G033300 Sobic001G066900 Sobic001G066900 Sobic005G146300--Sobic001G066900 Sobic009G031400 Sobic009G031400 Sobic005G146300--Sobic009G031400 Sobic004G341300 Sobic004G341300 Sobic005G146300--Sobic004G341300 Sobic002G039400 Sobic002G039400 Sobic005G146300--Sobic002G039400 Sobic003G045700 Sobic003G045700 Sobic005G146300--Sobic003G045700 Sobic001G441700 Sobic001G441700 Sobic005G146300--Sobic001G441700 Sobic005G146300--Sobic003G430000 Sobic003G183800 Sobic003G183800 Sobic005G146300--Sobic003G183800 Sobic007G027200--Sobic006G166800 Sobic007G027200--Sobic001G510200 Sobic007G027200--Sobic009G241600 Sobic007G027200--Sobic002G394700 Sobic007G027200--Sobic003G153400 Sobic007G027200--Sobic010G199700 Sobic007G027200--Sobic003G352800 Sobic007G027200--Sobic009G162800 Sobic007G027200--Sobic007G043800 Sobic007G033300--Sobic005G146300 Sobic007G033300--Sobic003G430000 Sobic007G033300--Sobic003G183800 Sobic007G033300--Sobic001G441700 Sobic006G139300 Sobic006G139300 Sobic007G033300--Sobic006G139300 Sobic003G020300 Sobic003G020300 Sobic007G033300--Sobic003G020300 Sobic007G033300--Sobic002G039400 Sobic005G088500 Sobic005G088500 Sobic007G033300--Sobic005G088500 Sobic007G033300--Sobic004G341300 Sobic010G196400--Sobic009G162800 Sobic010G196400--Sobic001G066900 Sobic001G265900 Sobic001G265900 Sobic010G196400--Sobic001G265900 Sobic010G196400--Sobic006G166800 Sobic001G307300 Sobic001G307300 Sobic010G196400--Sobic001G307300 Sobic010G196400--Sobic003G153400 Sobic001G275600 Sobic001G275600 Sobic010G196400--Sobic001G275600 Sobic009G151000 Sobic009G151000 Sobic010G196400--Sobic009G151000 Sobic001G250200 Sobic001G250200 Sobic010G196400--Sobic001G250200 Sobic009G162800--Sobic006G166800 Sobic009G162800--Sobic003G352800 Sobic009G162800--Sobic010G196400 Sobic009G162800--Sobic007G027200 Sobic009G162800--Sobic001G510200 Sobic009G162800--Sobic003G153400 Sobic009G162800--Sobic002G394700 Sobic003G276200 Sobic003G276200 Sobic009G162800--Sobic003G276200 Sobic009G162800--Sobic009G241600 Sobic010G199700--Sobic009G241600 Sobic008G112200 Sobic008G112200 Sobic010G199700--Sobic008G112200 Sobic010G199700--Sobic007G027200 Sobic010G199700--Sobic008G059800 Sobic010G199700--Sobic003G153400 Sobic001G468300 Sobic001G468300 Sobic010G199700--Sobic001G468300 Sobic003G236701 Sobic003G236701 Sobic010G199700--Sobic003G236701 Sobic010G199700--Sobic006G166800 Sobic010G199700--Sobic009G153800 Sobic001G510200--Sobic007G027200 Sobic001G510200--Sobic006G166800 Sobic001G510200--Sobic002G394700 Sobic001G221400 Sobic001G221400 Sobic001G510200--Sobic001G221400 Sobic004G167000 Sobic004G167000 Sobic001G510200--Sobic004G167000 Sobic001G510200--Sobic002G039400 Sobic006G125600 Sobic006G125600 Sobic001G510200--Sobic006G125600 Sobic010G108200 Sobic010G108200 Sobic001G510200--Sobic010G108200 Sobic008G008200 Sobic008G008200 Sobic001G510200--Sobic008G008200
Octagon: transcription factors


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