Gene annotation
Transcriptome id Sobic.007G033300.1
Synonym UCC1, Sb07g002860
Functional annotation plastocyanin-like domain containing protein, putative, expressed
UniProt C5YN07
Pfam PF02298
Panther DB PTHR33021 PTHR33021:SF52
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT5G26330 : Cupredoxin superfamily protein
RAP-DB (Rice) LOC_Os08g04310.1 : plastocyanin-like domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a055269
Brachypodium KQJ94996
Barley HORVU7Hr1G073390.3 , HORVU7Hr1G073390.2 , HORVU7Hr1G073390.1
Wheat TraesCS7B02G208300 , TraesCS7D02G304900 , TraesCS7A02G308100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G146300 Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
2 Sobic.003G430000 eukaryotic aspartyl protease domain containing protein, expressed -
3 Sobic.003G183800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.001G441700 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
5 Sobic.006G139300 plant protein of unknown function DUF869 domain containing protein, expressed -
6 Sobic.003G020300 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.002G039400 YABBY domain containing protein, putative, expressed -
8 Sobic.005G088500 integral membrane protein DUF6 containing protein, expressed -
9 Sobic.004G341300 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
10 Sobic.005G029700 BTBA6 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
11 Sobic.005G169700 targeting protein for Xklp2, putative, expressed -
12 Sobic.001G066900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsMan06 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
13 Sobic.003G420201 - -
14 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
15 Sobic.009G031400 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
16 Sobic.007G027200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
17 Sobic.003G045700 pleiotropic drug resistance protein, putative, expressed -
18 Sobic.004G205500 expressed protein -
19 Sobic.009G175200 expressed protein -
20 Sobic.008G114600 - -


Gene co-expression network
sample Sobic007G033300 Sobic007G033300 Sobic005G146300 Sobic005G146300 Sobic007G033300--Sobic005G146300 Sobic003G430000 Sobic003G430000 Sobic007G033300--Sobic003G430000 Sobic003G183800 Sobic003G183800 Sobic007G033300--Sobic003G183800 Sobic001G441700 Sobic001G441700 Sobic007G033300--Sobic001G441700 Sobic006G139300 Sobic006G139300 Sobic007G033300--Sobic006G139300 Sobic003G020300 Sobic003G020300 Sobic007G033300--Sobic003G020300 Sobic002G039400 Sobic002G039400 Sobic007G033300--Sobic002G039400 Sobic005G088500 Sobic005G088500 Sobic007G033300--Sobic005G088500 Sobic004G341300 Sobic004G341300 Sobic007G033300--Sobic004G341300 Sobic005G146300--Sobic007G033300 Sobic001G066900 Sobic001G066900 Sobic005G146300--Sobic001G066900 Sobic009G031400 Sobic009G031400 Sobic005G146300--Sobic009G031400 Sobic005G146300--Sobic004G341300 Sobic005G146300--Sobic002G039400 Sobic003G045700 Sobic003G045700 Sobic005G146300--Sobic003G045700 Sobic005G146300--Sobic001G441700 Sobic005G146300--Sobic003G430000 Sobic005G146300--Sobic003G183800 Sobic006G166800 Sobic006G166800 Sobic003G430000--Sobic006G166800 Sobic003G352800 Sobic003G352800 Sobic003G430000--Sobic003G352800 Sobic003G430000--Sobic005G146300 Sobic007G027200 Sobic007G027200 Sobic003G430000--Sobic007G027200 Sobic003G430000--Sobic007G033300 Sobic010G196400 Sobic010G196400 Sobic003G430000--Sobic010G196400 Sobic009G162800 Sobic009G162800 Sobic003G430000--Sobic009G162800 Sobic010G199700 Sobic010G199700 Sobic003G430000--Sobic010G199700 Sobic001G510200 Sobic001G510200 Sobic003G430000--Sobic001G510200 Sobic008G145300 Sobic008G145300 Sobic003G183800--Sobic008G145300 Sobic003G183800--Sobic001G441700 Sobic003G183800--Sobic005G146300 Sobic003G183800--Sobic007G033300 Sobic003G183800--Sobic002G039400 Sobic005G169700 Sobic005G169700 Sobic003G183800--Sobic005G169700 Sobic003G183800--Sobic004G341300 Sobic003G183800--Sobic005G088500 Sobic006G245300 Sobic006G245300 Sobic003G183800--Sobic006G245300 Sobic001G441700--Sobic004G341300 Sobic001G441700--Sobic003G045700 Sobic001G441700--Sobic002G039400 Sobic010G233900 Sobic010G233900 Sobic001G441700--Sobic010G233900 Sobic010G231600 Sobic010G231600 Sobic001G441700--Sobic010G231600 Sobic001G441700--Sobic003G183800 Sobic001G441700--Sobic005G146300 Sobic001G266600 Sobic001G266600 Sobic001G441700--Sobic001G266600 Sobic001G207600 Sobic001G207600 Sobic001G441700--Sobic001G207600 Sobic006G139300--Sobic003G020300 Sobic003G420201 Sobic003G420201 Sobic006G139300--Sobic003G420201 Sobic006G046500 Sobic006G046500 Sobic006G139300--Sobic006G046500 Sobic006G139300--Sobic005G088500 Sobic008G114600 Sobic008G114600 Sobic006G139300--Sobic008G114600 Sobic006G139300--Sobic007G033300 Sobic005G135700 Sobic005G135700 Sobic006G139300--Sobic005G135700 Sobic009G056400 Sobic009G056400 Sobic006G139300--Sobic009G056400 Sobic004G066100 Sobic004G066100 Sobic006G139300--Sobic004G066100 Sobic003G020300--Sobic006G139300 Sobic003G020300--Sobic008G114600 Sobic003G020300--Sobic006G046500 Sobic003G020300--Sobic005G088500 Sobic003G020300--Sobic003G420201 Sobic003G020300--Sobic004G066100 Sobic003G020300--Sobic007G033300 Sobic003G020300--Sobic005G135700 Sobic003G020300--Sobic006G245300 Sobic002G039400--Sobic005G088500 Sobic002G039400--Sobic001G266600 Sobic002G039400--Sobic001G510200 Sobic002G039400--Sobic004G341300 Sobic007G162200 Sobic007G162200 Sobic002G039400--Sobic007G162200 Sobic010G195800 Sobic010G195800 Sobic002G039400--Sobic010G195800 Sobic008G087300 Sobic008G087300 Sobic002G039400--Sobic008G087300 Sobic004G167000 Sobic004G167000 Sobic002G039400--Sobic004G167000 Sobic006G005700 Sobic006G005700 Sobic002G039400--Sobic006G005700 Sobic005G088500--Sobic002G039400 Sobic005G088500--Sobic005G135700 Sobic002G394700 Sobic002G394700 Sobic005G088500--Sobic002G394700 Sobic005G088500--Sobic006G046500 Sobic010G108200 Sobic010G108200 Sobic005G088500--Sobic010G108200 Sobic009G109850 Sobic009G109850 Sobic005G088500--Sobic009G109850 Sobic005G088500--Sobic001G510200 Sobic006G125600 Sobic006G125600 Sobic005G088500--Sobic006G125600 Sobic003G071300 Sobic003G071300 Sobic005G088500--Sobic003G071300 Sobic005G006000 Sobic005G006000 Sobic004G341300--Sobic005G006000 Sobic009G048600 Sobic009G048600 Sobic004G341300--Sobic009G048600 Sobic004G341300--Sobic006G005700 Sobic008G156100 Sobic008G156100 Sobic004G341300--Sobic008G156100 Sobic002G028201 Sobic002G028201 Sobic004G341300--Sobic002G028201 Sobic006G281132 Sobic006G281132 Sobic004G341300--Sobic006G281132 Sobic009G146000 Sobic009G146000 Sobic004G341300--Sobic009G146000 Sobic003G367100 Sobic003G367100 Sobic004G341300--Sobic003G367100 Sobic004G341300--Sobic001G266600
Octagon: transcription factors


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