Gene annotation
Transcriptome id Sobic.003G183800.1
Synonym ATMYB86, MYB86, Sb03g024500
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5XMX8
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF661
NCBI CDD KOG0048; Transcription factor, Myb superfamily
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G26660 : myb domain protein 86
RAP-DB (Rice) LOC_Os01g36460.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a048106 , Zm00025a048891 , Zm00025a039543 , Zm00025a025715 , Zm00025a028816
Brachypodium KQK15034 , KQK15035 , KQJ83102 , KQJ92025 , KQK16124 , KQJ98746 , KQJ83755 , PNT75046 , KQJ87229 , KQK09372 , KQK08236
Barley HORVU2Hr1G051030.3 , HORVU2Hr1G051030.2 , HORVU2Hr1G051030.1 , HORVU2Hr1G091530.2 , HORVU2Hr1G091530.1 , HORVU3Hr1G047290.4 , HORVU3Hr1G047290.1 , HORVU3Hr1G047290.3 , HORVU3Hr1G047290.2 , HORVU2Hr1G051010.1 , HORVU1Hr1G061220.1
Wheat TraesCS2B02G252000 , TraesCS3B02G224500 , TraesCS2D02G234000 , TraesCS3A02G200300 , TraesCS2A02G230400
Populus -


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cDNA sequences
Sobic.003G183800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G145300 BTBN24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
2 Sobic.001G441700 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
3 Sobic.005G146300 Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
4 Sobic.007G033300 plastocyanin-like domain containing protein, putative, expressed -
5 Sobic.002G039400 YABBY domain containing protein, putative, expressed -
6 Sobic.005G169700 targeting protein for Xklp2, putative, expressed -
7 Sobic.004G341300 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
8 Sobic.005G088500 integral membrane protein DUF6 containing protein, expressed -
9 Sobic.006G245300 expressed protein -
10 Sobic.010G233900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Os6bglu25 - beta-glucosidase homologue, similar to Os3bglu6, expressed K01188: beta-glucosidase
11 Sobic.001G266600 LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.007G027200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
13 Sobic.009G153800 protein kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
14 Sobic.006G046500 deoxyhypusine synthase, putative, expressed K00809: DHPS, deoxyhypusine synthase
15 Sobic.004G205500 expressed protein -
16 Sobic.008G112200 Expressed in middle stem(PubMedID : 28649278)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
17 Sobic.010G199700 STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed -
18 Sobic.009G048600 - -
19 Sobic.009G175200 expressed protein -
20 Sobic.006G005700 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1


Gene co-expression network
sample Sobic003G183800 Sobic003G183800 Sobic008G145300 Sobic008G145300 Sobic003G183800--Sobic008G145300 Sobic001G441700 Sobic001G441700 Sobic003G183800--Sobic001G441700 Sobic005G146300 Sobic005G146300 Sobic003G183800--Sobic005G146300 Sobic007G033300 Sobic007G033300 Sobic003G183800--Sobic007G033300 Sobic002G039400 Sobic002G039400 Sobic003G183800--Sobic002G039400 Sobic005G169700 Sobic005G169700 Sobic003G183800--Sobic005G169700 Sobic004G341300 Sobic004G341300 Sobic003G183800--Sobic004G341300 Sobic005G088500 Sobic005G088500 Sobic003G183800--Sobic005G088500 Sobic006G245300 Sobic006G245300 Sobic003G183800--Sobic006G245300 Sobic008G145300--Sobic003G183800 Sobic002G306300 Sobic002G306300 Sobic008G145300--Sobic002G306300 Sobic002G229800 Sobic002G229800 Sobic008G145300--Sobic002G229800 Sobic007G113900 Sobic007G113900 Sobic008G145300--Sobic007G113900 Sobic004G336700 Sobic004G336700 Sobic008G145300--Sobic004G336700 Sobic008G145300--Sobic001G441700 Sobic004G205500 Sobic004G205500 Sobic008G145300--Sobic004G205500 Sobic008G145300--Sobic005G169700 Sobic003G174900 Sobic003G174900 Sobic008G145300--Sobic003G174900 Sobic001G441700--Sobic004G341300 Sobic003G045700 Sobic003G045700 Sobic001G441700--Sobic003G045700 Sobic001G441700--Sobic002G039400 Sobic010G233900 Sobic010G233900 Sobic001G441700--Sobic010G233900 Sobic010G231600 Sobic010G231600 Sobic001G441700--Sobic010G231600 Sobic001G441700--Sobic003G183800 Sobic001G441700--Sobic005G146300 Sobic001G266600 Sobic001G266600 Sobic001G441700--Sobic001G266600 Sobic001G207600 Sobic001G207600 Sobic001G441700--Sobic001G207600 Sobic005G146300--Sobic007G033300 Sobic001G066900 Sobic001G066900 Sobic005G146300--Sobic001G066900 Sobic009G031400 Sobic009G031400 Sobic005G146300--Sobic009G031400 Sobic005G146300--Sobic004G341300 Sobic005G146300--Sobic002G039400 Sobic005G146300--Sobic003G045700 Sobic005G146300--Sobic001G441700 Sobic003G430000 Sobic003G430000 Sobic005G146300--Sobic003G430000 Sobic005G146300--Sobic003G183800 Sobic007G033300--Sobic005G146300 Sobic007G033300--Sobic003G430000 Sobic007G033300--Sobic003G183800 Sobic007G033300--Sobic001G441700 Sobic006G139300 Sobic006G139300 Sobic007G033300--Sobic006G139300 Sobic003G020300 Sobic003G020300 Sobic007G033300--Sobic003G020300 Sobic007G033300--Sobic002G039400 Sobic007G033300--Sobic005G088500 Sobic007G033300--Sobic004G341300 Sobic002G039400--Sobic005G088500 Sobic002G039400--Sobic001G266600 Sobic001G510200 Sobic001G510200 Sobic002G039400--Sobic001G510200 Sobic002G039400--Sobic004G341300 Sobic007G162200 Sobic007G162200 Sobic002G039400--Sobic007G162200 Sobic010G195800 Sobic010G195800 Sobic002G039400--Sobic010G195800 Sobic008G087300 Sobic008G087300 Sobic002G039400--Sobic008G087300 Sobic004G167000 Sobic004G167000 Sobic002G039400--Sobic004G167000 Sobic006G005700 Sobic006G005700 Sobic002G039400--Sobic006G005700 Sobic001G535400 Sobic001G535400 Sobic005G169700--Sobic001G535400 Sobic001G468300 Sobic001G468300 Sobic005G169700--Sobic001G468300 Sobic005G169700--Sobic003G183800 Sobic005G169700--Sobic005G146300 Sobic005G169700--Sobic007G033300 Sobic007G027200 Sobic007G027200 Sobic005G169700--Sobic007G027200 Sobic001G339400 Sobic001G339400 Sobic005G169700--Sobic001G339400 Sobic010G199700 Sobic010G199700 Sobic005G169700--Sobic010G199700 Sobic009G153800 Sobic009G153800 Sobic005G169700--Sobic009G153800 Sobic005G006000 Sobic005G006000 Sobic004G341300--Sobic005G006000 Sobic009G048600 Sobic009G048600 Sobic004G341300--Sobic009G048600 Sobic004G341300--Sobic006G005700 Sobic008G156100 Sobic008G156100 Sobic004G341300--Sobic008G156100 Sobic002G028201 Sobic002G028201 Sobic004G341300--Sobic002G028201 Sobic006G281132 Sobic006G281132 Sobic004G341300--Sobic006G281132 Sobic009G146000 Sobic009G146000 Sobic004G341300--Sobic009G146000 Sobic003G367100 Sobic003G367100 Sobic004G341300--Sobic003G367100 Sobic004G341300--Sobic001G266600 Sobic005G088500--Sobic002G039400 Sobic005G135700 Sobic005G135700 Sobic005G088500--Sobic005G135700 Sobic002G394700 Sobic002G394700 Sobic005G088500--Sobic002G394700 Sobic006G046500 Sobic006G046500 Sobic005G088500--Sobic006G046500 Sobic010G108200 Sobic010G108200 Sobic005G088500--Sobic010G108200 Sobic009G109850 Sobic009G109850 Sobic005G088500--Sobic009G109850 Sobic005G088500--Sobic001G510200 Sobic006G125600 Sobic006G125600 Sobic005G088500--Sobic006G125600 Sobic003G071300 Sobic003G071300 Sobic005G088500--Sobic003G071300 Sobic006G245300--Sobic006G046500 Sobic004G220300 Sobic004G220300 Sobic006G245300--Sobic004G220300 Sobic009G175200 Sobic009G175200 Sobic006G245300--Sobic009G175200 Sobic006G245300--Sobic003G020300 Sobic003G375000 Sobic003G375000 Sobic006G245300--Sobic003G375000 Sobic006G245300--Sobic006G139300 Sobic008G086200 Sobic008G086200 Sobic006G245300--Sobic008G086200 Sobic006G245300--Sobic005G088500 Sobic006G245300--Sobic003G183800
Octagon: transcription factors


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