Gene annotation
Transcriptome id Sobic.010G233900.1
Synonym BGLU41, Sb10g027600
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
Os6bglu25 - beta-glucosidase homologue, similar to Os3bglu6, expressed
UniProt C5Z877
Pfam PF00232
Panther DB PTHR10353 PTHR10353:SF46
NCBI CDD -
KEGG Orthology K01188; beta-glucosidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G54570 : beta glucosidase 41
RAP-DB (Rice) LOC_Os06g46940.2 : Os6bglu25 - beta-glucosidase homologue, similar to Os3bglu6, expressed
MaizeGDB (Corn) Zm00025a018158
Brachypodium KQK17207 , KQK17206 , KQK17205 , KQK17209 , KQK17208
Barley HORVU7Hr1G101800.42 , HORVU7Hr1G101800.43 , HORVU7Hr1G101800.40 , HORVU7Hr1G101800.41 , HORVU7Hr1G101800.46 , HORVU7Hr1G101800.47 , HORVU7Hr1G101800.44 , HORVU7Hr1G101800.45 , HORVU7Hr1G101800.48 , HORVU7Hr1G101800.37 , HORVU7Hr1G101800.36 , HORVU7Hr1G101800.35 , HORVU7Hr1G101800.34 , HORVU7Hr1G101800.33 , HORVU7Hr1G101800.32 , HORVU7Hr1G101800.31 , HORVU7Hr1G101800.30 , HORVU7Hr1G101800.39 , HORVU7Hr1G101800.38 , HORVU7Hr1G101800.12 , HORVU7Hr1G101800.24 , HORVU7Hr1G101800.25 , HORVU7Hr1G101800.26 , HORVU7Hr1G101800.27 , HORVU7Hr1G101800.20 , HORVU7Hr1G101800.21 , HORVU7Hr1G101800.22 , HORVU7Hr1G101800.23 , HORVU7Hr1G101800.28 , HORVU7Hr1G101800.29 , HORVU7Hr1G101800.9 , HORVU7Hr1G101800.5 , HORVU7Hr1G101800.4 , HORVU7Hr1G101800.7 , HORVU7Hr1G101800.6 , HORVU7Hr1G101800.3 , HORVU7Hr1G101800.2 , HORVU7Hr1G101800.19 , HORVU7Hr1G101800.18 , HORVU7Hr1G101800.11 , HORVU7Hr1G101800.10 , HORVU7Hr1G101800.13 , HORVU7Hr1G101800.15 , HORVU7Hr1G101800.14 , HORVU7Hr1G101800.17 , HORVU7Hr1G101800.16 , HORVU7Hr1G101800.8
Wheat TraesCS7B02G350300 , TraesCS7B02G350300 , TraesCS7B02G350300 , TraesCS7A02G450500 , TraesCS7A02G450500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G441700 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
2 Sobic.004G341300 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
3 Sobic.010G199700 STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed -
4 Sobic.002G039400 YABBY domain containing protein, putative, expressed -
5 Sobic.003G198048 - -
6 Sobic.003G045700 pleiotropic drug resistance protein, putative, expressed -
7 Sobic.010G124600 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
8 Sobic.007G027200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
9 Sobic.001G538000 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
10 Sobic.001G510200 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
11 Sobic.005G146300 Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
12 Sobic.005G088500 integral membrane protein DUF6 containing protein, expressed -
13 Sobic.004G028900 expressed protein -
14 Sobic.001G266600 LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.010G231600 cytochrome P450, putative, expressed -
16 Sobic.003G367100 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
17 Sobic.009G048600 - -
18 Sobic.003G183800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.008G112200 Expressed in middle stem(PubMedID : 28649278)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.009G153800 protein kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5


Gene co-expression network
sample Sobic010G233900 Sobic010G233900 Sobic001G441700 Sobic001G441700 Sobic010G233900--Sobic001G441700 Sobic004G341300 Sobic004G341300 Sobic010G233900--Sobic004G341300 Sobic010G199700 Sobic010G199700 Sobic010G233900--Sobic010G199700 Sobic002G039400 Sobic002G039400 Sobic010G233900--Sobic002G039400 Sobic003G198048 Sobic003G198048 Sobic010G233900--Sobic003G198048 Sobic003G045700 Sobic003G045700 Sobic010G233900--Sobic003G045700 Sobic010G124600 Sobic010G124600 Sobic010G233900--Sobic010G124600 Sobic007G027200 Sobic007G027200 Sobic010G233900--Sobic007G027200 Sobic001G538000 Sobic001G538000 Sobic010G233900--Sobic001G538000 Sobic001G441700--Sobic004G341300 Sobic001G441700--Sobic003G045700 Sobic001G441700--Sobic002G039400 Sobic001G441700--Sobic010G233900 Sobic010G231600 Sobic010G231600 Sobic001G441700--Sobic010G231600 Sobic003G183800 Sobic003G183800 Sobic001G441700--Sobic003G183800 Sobic005G146300 Sobic005G146300 Sobic001G441700--Sobic005G146300 Sobic001G266600 Sobic001G266600 Sobic001G441700--Sobic001G266600 Sobic001G207600 Sobic001G207600 Sobic001G441700--Sobic001G207600 Sobic005G006000 Sobic005G006000 Sobic004G341300--Sobic005G006000 Sobic009G048600 Sobic009G048600 Sobic004G341300--Sobic009G048600 Sobic006G005700 Sobic006G005700 Sobic004G341300--Sobic006G005700 Sobic008G156100 Sobic008G156100 Sobic004G341300--Sobic008G156100 Sobic002G028201 Sobic002G028201 Sobic004G341300--Sobic002G028201 Sobic006G281132 Sobic006G281132 Sobic004G341300--Sobic006G281132 Sobic009G146000 Sobic009G146000 Sobic004G341300--Sobic009G146000 Sobic003G367100 Sobic003G367100 Sobic004G341300--Sobic003G367100 Sobic004G341300--Sobic001G266600 Sobic009G241600 Sobic009G241600 Sobic010G199700--Sobic009G241600 Sobic008G112200 Sobic008G112200 Sobic010G199700--Sobic008G112200 Sobic010G199700--Sobic007G027200 Sobic008G059800 Sobic008G059800 Sobic010G199700--Sobic008G059800 Sobic003G153400 Sobic003G153400 Sobic010G199700--Sobic003G153400 Sobic001G468300 Sobic001G468300 Sobic010G199700--Sobic001G468300 Sobic003G236701 Sobic003G236701 Sobic010G199700--Sobic003G236701 Sobic006G166800 Sobic006G166800 Sobic010G199700--Sobic006G166800 Sobic009G153800 Sobic009G153800 Sobic010G199700--Sobic009G153800 Sobic005G088500 Sobic005G088500 Sobic002G039400--Sobic005G088500 Sobic002G039400--Sobic001G266600 Sobic001G510200 Sobic001G510200 Sobic002G039400--Sobic001G510200 Sobic002G039400--Sobic004G341300 Sobic007G162200 Sobic007G162200 Sobic002G039400--Sobic007G162200 Sobic010G195800 Sobic010G195800 Sobic002G039400--Sobic010G195800 Sobic008G087300 Sobic008G087300 Sobic002G039400--Sobic008G087300 Sobic004G167000 Sobic004G167000 Sobic002G039400--Sobic004G167000 Sobic002G039400--Sobic006G005700 Sobic003G198016 Sobic003G198016 Sobic003G198048--Sobic003G198016 Sobic003G198048--Sobic010G124600 Sobic006G034200 Sobic006G034200 Sobic003G198048--Sobic006G034200 Sobic003G198048--Sobic001G538000 Sobic005G110538 Sobic005G110538 Sobic003G198048--Sobic005G110538 Sobic009G156400 Sobic009G156400 Sobic003G198048--Sobic009G156400 Sobic003G198048--Sobic008G087300 Sobic003G179700 Sobic003G179700 Sobic003G198048--Sobic003G179700 Sobic003G198048--Sobic004G167000 Sobic003G045700--Sobic010G231600 Sobic003G045700--Sobic001G207600 Sobic004G283800 Sobic004G283800 Sobic003G045700--Sobic004G283800 Sobic005G156100 Sobic005G156100 Sobic003G045700--Sobic005G156100 Sobic009G031400 Sobic009G031400 Sobic003G045700--Sobic009G031400 Sobic003G045700--Sobic001G441700 Sobic006G125800 Sobic006G125800 Sobic003G045700--Sobic006G125800 Sobic001G023500 Sobic001G023500 Sobic003G045700--Sobic001G023500 Sobic009G173200 Sobic009G173200 Sobic003G045700--Sobic009G173200 Sobic010G124600--Sobic004G167000 Sobic010G124600--Sobic008G087300 Sobic001G266900 Sobic001G266900 Sobic010G124600--Sobic001G266900 Sobic008G008200 Sobic008G008200 Sobic010G124600--Sobic008G008200 Sobic003G040400 Sobic003G040400 Sobic010G124600--Sobic003G040400 Sobic010G180000 Sobic010G180000 Sobic010G124600--Sobic010G180000 Sobic009G239800 Sobic009G239800 Sobic010G124600--Sobic009G239800 Sobic008G138300 Sobic008G138300 Sobic010G124600--Sobic008G138300 Sobic010G159500 Sobic010G159500 Sobic010G124600--Sobic010G159500 Sobic007G027200--Sobic006G166800 Sobic007G027200--Sobic001G510200 Sobic007G027200--Sobic009G241600 Sobic002G394700 Sobic002G394700 Sobic007G027200--Sobic002G394700 Sobic007G027200--Sobic003G153400 Sobic007G027200--Sobic010G199700 Sobic003G352800 Sobic003G352800 Sobic007G027200--Sobic003G352800 Sobic009G162800 Sobic009G162800 Sobic007G027200--Sobic009G162800 Sobic007G043800 Sobic007G043800 Sobic007G027200--Sobic007G043800 Sobic001G538000--Sobic010G124600 Sobic001G538000--Sobic008G008200 Sobic001G538000--Sobic004G167000 Sobic001G538000--Sobic008G087300 Sobic007G068700 Sobic007G068700 Sobic001G538000--Sobic007G068700 Sobic001G538000--Sobic009G239800 Sobic001G538000--Sobic010G180000 Sobic010G005900 Sobic010G005900 Sobic001G538000--Sobic010G005900 Sobic001G303750 Sobic001G303750 Sobic001G538000--Sobic001G303750
Octagon: transcription factors


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