Gene annotation
Transcriptome id Sobic.004G028900.1
Synonym Sb04g002550
Functional annotation expressed protein
UniProt A0A194YMD0
Pfam -
Panther DB PTHR12242 PTHR12242:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G62960 : -
RAP-DB (Rice) LOC_Os02g03790.1 : expressed protein
MaizeGDB (Corn) Zm00025a018844
Brachypodium KQJ93127
Barley HORVU6Hr1G016420.3 , HORVU6Hr1G016420.2 , HORVU6Hr1G016420.5 , HORVU6Hr1G016420.4 , HORVU6Hr1G016420.6
Wheat TraesCS6D02G080200
Populus -


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cDNA sequences
Sobic.004G028900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G116500 phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase
2 Sobic.001G196600 OsProCP4 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed -
3 Sobic.001G023500 expressed protein -
4 Sobic.005G055600 myosin heavy chain-related, putative, expressed -
5 Sobic.003G098100 aquaporin protein, putative, expressed K09874: aquaporin NIP
6 Sobic.003G409600 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
7 Sobic.004G341300 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
8 Sobic.001G285200 protein transport protein-related, putative, expressed -
9 Sobic.004G017500 helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.008G192700 ATMAP70 protein, putative, expressed -
11 Sobic.003G364900 hemerythrin family protein, expressed -
12 Sobic.003G367100 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
13 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
14 Sobic.009G153400 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
15 Sobic.004G328300 expressed protein -
16 Sobic.001G154300 DNA binding protein, putative, expressed -
17 Sobic.009G146000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@galactosyltransferase, putative, expressed -
18 Sobic.001G221200 alcohol oxidase, putative, expressed K17756: long-chain-alcohol oxidase
19 Sobic.004G270300 - -
20 Sobic.010G053900 RING-H2 finger protein, putative, expressed -


Gene co-expression network
sample Sobic004G028900 Sobic004G028900 Sobic007G116500 Sobic007G116500 Sobic004G028900--Sobic007G116500 Sobic001G196600 Sobic001G196600 Sobic004G028900--Sobic001G196600 Sobic001G023500 Sobic001G023500 Sobic004G028900--Sobic001G023500 Sobic005G055600 Sobic005G055600 Sobic004G028900--Sobic005G055600 Sobic003G098100 Sobic003G098100 Sobic004G028900--Sobic003G098100 Sobic003G409600 Sobic003G409600 Sobic004G028900--Sobic003G409600 Sobic004G341300 Sobic004G341300 Sobic004G028900--Sobic004G341300 Sobic001G285200 Sobic001G285200 Sobic004G028900--Sobic001G285200 Sobic004G017500 Sobic004G017500 Sobic004G028900--Sobic004G017500 Sobic009G187700 Sobic009G187700 Sobic007G116500--Sobic009G187700 Sobic002G007500 Sobic002G007500 Sobic007G116500--Sobic002G007500 Sobic001G530700 Sobic001G530700 Sobic007G116500--Sobic001G530700 Sobic009G180300 Sobic009G180300 Sobic007G116500--Sobic009G180300 Sobic007G116500--Sobic004G028900 Sobic007G116500--Sobic001G196600 Sobic001G154300 Sobic001G154300 Sobic007G116500--Sobic001G154300 Sobic007G116500--Sobic004G017500 Sobic003G347400 Sobic003G347400 Sobic007G116500--Sobic003G347400 Sobic003G159700 Sobic003G159700 Sobic001G196600--Sobic003G159700 Sobic007G111300 Sobic007G111300 Sobic001G196600--Sobic007G111300 Sobic010G253200 Sobic010G253200 Sobic001G196600--Sobic010G253200 Sobic001G196600--Sobic007G116500 Sobic001G196600--Sobic004G028900 Sobic008G104000 Sobic008G104000 Sobic001G196600--Sobic008G104000 Sobic003G266400 Sobic003G266400 Sobic001G196600--Sobic003G266400 Sobic001G196600--Sobic001G154300 Sobic002G192900 Sobic002G192900 Sobic001G196600--Sobic002G192900 Sobic004G328300 Sobic004G328300 Sobic001G023500--Sobic004G328300 Sobic001G023500--Sobic001G154300 Sobic001G201000 Sobic001G201000 Sobic001G023500--Sobic001G201000 Sobic001G023500--Sobic005G055600 Sobic010G231600 Sobic010G231600 Sobic001G023500--Sobic010G231600 Sobic002G320600 Sobic002G320600 Sobic001G023500--Sobic002G320600 Sobic003G045700 Sobic003G045700 Sobic001G023500--Sobic003G045700 Sobic003G031700 Sobic003G031700 Sobic001G023500--Sobic003G031700 Sobic001G023500--Sobic001G285200 Sobic005G055600--Sobic004G328300 Sobic005G055600--Sobic001G201000 Sobic005G055600--Sobic001G285200 Sobic002G074000 Sobic002G074000 Sobic005G055600--Sobic002G074000 Sobic001G416000 Sobic001G416000 Sobic005G055600--Sobic001G416000 Sobic009G202801 Sobic009G202801 Sobic005G055600--Sobic009G202801 Sobic009G175100 Sobic009G175100 Sobic005G055600--Sobic009G175100 Sobic007G087800 Sobic007G087800 Sobic005G055600--Sobic007G087800 Sobic005G055600--Sobic001G023500 Sobic009G146000 Sobic009G146000 Sobic003G098100--Sobic009G146000 Sobic005G006000 Sobic005G006000 Sobic003G098100--Sobic005G006000 Sobic008G156100 Sobic008G156100 Sobic003G098100--Sobic008G156100 Sobic002G028201 Sobic002G028201 Sobic003G098100--Sobic002G028201 Sobic006G281132 Sobic006G281132 Sobic003G098100--Sobic006G281132 Sobic009G048600 Sobic009G048600 Sobic003G098100--Sobic009G048600 Sobic003G367100 Sobic003G367100 Sobic003G098100--Sobic003G367100 Sobic001G266600 Sobic001G266600 Sobic003G098100--Sobic001G266600 Sobic006G005700 Sobic006G005700 Sobic003G098100--Sobic006G005700 Sobic004G306100 Sobic004G306100 Sobic003G409600--Sobic004G306100 Sobic003G315700 Sobic003G315700 Sobic003G409600--Sobic003G315700 Sobic007G219100 Sobic007G219100 Sobic003G409600--Sobic007G219100 Sobic002G271400 Sobic002G271400 Sobic003G409600--Sobic002G271400 Sobic006G127200 Sobic006G127200 Sobic003G409600--Sobic006G127200 Sobic003G409600--Sobic009G202801 Sobic010G103500 Sobic010G103500 Sobic003G409600--Sobic010G103500 Sobic003G411700 Sobic003G411700 Sobic003G409600--Sobic003G411700 Sobic010G052400 Sobic010G052400 Sobic003G409600--Sobic010G052400 Sobic004G341300--Sobic005G006000 Sobic004G341300--Sobic009G048600 Sobic004G341300--Sobic006G005700 Sobic004G341300--Sobic008G156100 Sobic004G341300--Sobic002G028201 Sobic004G341300--Sobic006G281132 Sobic004G341300--Sobic009G146000 Sobic004G341300--Sobic003G367100 Sobic004G341300--Sobic001G266600 Sobic002G419200 Sobic002G419200 Sobic001G285200--Sobic002G419200 Sobic001G285200--Sobic001G201000 Sobic006G272500 Sobic006G272500 Sobic001G285200--Sobic006G272500 Sobic001G285200--Sobic005G055600 Sobic003G277200 Sobic003G277200 Sobic001G285200--Sobic003G277200 Sobic008G192700 Sobic008G192700 Sobic001G285200--Sobic008G192700 Sobic003G338200 Sobic003G338200 Sobic001G285200--Sobic003G338200 Sobic010G211800 Sobic010G211800 Sobic001G285200--Sobic010G211800 Sobic001G285200--Sobic009G175100 Sobic008G163900 Sobic008G163900 Sobic004G017500--Sobic008G163900 Sobic004G017500--Sobic002G007500 Sobic004G017500--Sobic009G180300 Sobic001G359000 Sobic001G359000 Sobic004G017500--Sobic001G359000 Sobic006G067300 Sobic006G067300 Sobic004G017500--Sobic006G067300 Sobic009G168100 Sobic009G168100 Sobic004G017500--Sobic009G168100 Sobic004G218100 Sobic004G218100 Sobic004G017500--Sobic004G218100 Sobic006G015700 Sobic006G015700 Sobic004G017500--Sobic006G015700 Sobic008G140600 Sobic008G140600 Sobic004G017500--Sobic008G140600
Octagon: transcription factors


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