Gene annotation
Transcriptome id Sobic.001G538000.1
Synonym XTH32, Sb01g050070
Functional annotation glycosyl hydrolases family 16, putative, expressed
UniProt C5WMQ4
Pfam PF06955 PF00722
Panther DB PTHR31062 PTHR31062:SF22
NCBI CDD -
KEGG Orthology K08235; xyloglucan:xyloglucosyl transferase
Gene Ontology GO:0016762; xyloglucan:xyloglucosyl transferase activity GO:0006073cellular glucan metabolic process GO:0005618cell wall GO:0005975carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT2G36870 : xyloglucan endotransglucosylase/hydrolase 32
RAP-DB (Rice) LOC_Os03g01800.1 : glycosyl hydrolases family 16, putative, expressed
MaizeGDB (Corn) Zm00025a048023 , Zm00025a000152 , Zm00025a003233 , Zm00025a032745
Brachypodium KQK24074 , KQK16264
Barley HORVU4Hr1G090820.2 , HORVU7Hr1G086890.4 , HORVU7Hr1G086890.5 , HORVU7Hr1G086890.6 , HORVU7Hr1G086890.7 , HORVU7Hr1G086890.1 , HORVU7Hr1G086890.2 , HORVU7Hr1G086890.3 , HORVU7Hr1G086890.8 , HORVU7Hr1G086890.9
Wheat TraesCS7A02G363000 , TraesCS7B02G265000 , TraesCS7B02G265000 , TraesCS5A02G548500 , TraesCS4D02G358700 , TraesCS7D02G360100 , TraesCS4B02G383000
Populus -


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cDNA sequences
Sobic.001G538000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G124600 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
2 Sobic.008G008200 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
3 Sobic.004G167000 POEI29 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
4 Sobic.008G087300 3-oxoacyl-reductase, chloroplast precursor, putative, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
5 Sobic.007G068700 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
6 Sobic.009G239800 DUF538 domain containing protein, putative, expressed -
7 Sobic.010G180000 - -
8 Sobic.010G005900 nodulin, putative, expressed -
9 Sobic.001G303750 - -
10 Sobic.001G266900 LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.003G040400 cytochrome P450, putative, expressed -
12 Sobic.010G195800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamoyl-CoA reductase family (At)(PubMedID : 27208977)@reductase, putative, expressed -
13 Sobic.008G138300 expressed protein -
14 Sobic.005G110538 - K08818: cell division cycle 2-like
15 Sobic.003G162500 expressed protein -
16 Sobic.008G126000 calmodulin binding protein, putative, expressed -
17 Sobic.002G129500 LTPL61 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
18 Sobic.007G162200 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.001G215201 - -
20 Sobic.006G251301 - -


Gene co-expression network
sample Sobic001G538000 Sobic001G538000 Sobic010G124600 Sobic010G124600 Sobic001G538000--Sobic010G124600 Sobic008G008200 Sobic008G008200 Sobic001G538000--Sobic008G008200 Sobic004G167000 Sobic004G167000 Sobic001G538000--Sobic004G167000 Sobic008G087300 Sobic008G087300 Sobic001G538000--Sobic008G087300 Sobic007G068700 Sobic007G068700 Sobic001G538000--Sobic007G068700 Sobic009G239800 Sobic009G239800 Sobic001G538000--Sobic009G239800 Sobic010G180000 Sobic010G180000 Sobic001G538000--Sobic010G180000 Sobic010G005900 Sobic010G005900 Sobic001G538000--Sobic010G005900 Sobic001G303750 Sobic001G303750 Sobic001G538000--Sobic001G303750 Sobic010G124600--Sobic004G167000 Sobic010G124600--Sobic008G087300 Sobic001G266900 Sobic001G266900 Sobic010G124600--Sobic001G266900 Sobic010G124600--Sobic008G008200 Sobic003G040400 Sobic003G040400 Sobic010G124600--Sobic003G040400 Sobic010G124600--Sobic010G180000 Sobic010G124600--Sobic009G239800 Sobic008G138300 Sobic008G138300 Sobic010G124600--Sobic008G138300 Sobic010G159500 Sobic010G159500 Sobic010G124600--Sobic010G159500 Sobic008G008200--Sobic008G087300 Sobic008G008200--Sobic004G167000 Sobic008G008200--Sobic010G180000 Sobic008G008200--Sobic001G266900 Sobic008G008200--Sobic009G239800 Sobic008G008200--Sobic007G068700 Sobic008G008200--Sobic008G138300 Sobic003G162500 Sobic003G162500 Sobic008G008200--Sobic003G162500 Sobic008G008200--Sobic010G159500 Sobic004G167000--Sobic008G087300 Sobic004G167000--Sobic001G266900 Sobic004G167000--Sobic008G008200 Sobic004G167000--Sobic010G180000 Sobic004G167000--Sobic008G138300 Sobic004G167000--Sobic010G159500 Sobic007G064600 Sobic007G064600 Sobic004G167000--Sobic007G064600 Sobic003G239400 Sobic003G239400 Sobic004G167000--Sobic003G239400 Sobic004G167000--Sobic003G040400 Sobic008G087300--Sobic004G167000 Sobic008G087300--Sobic001G266900 Sobic008G087300--Sobic008G008200 Sobic008G087300--Sobic010G180000 Sobic008G087300--Sobic008G138300 Sobic008G087300--Sobic010G159500 Sobic008G087300--Sobic009G239800 Sobic008G087300--Sobic003G239400 Sobic008G126000 Sobic008G126000 Sobic008G087300--Sobic008G126000 Sobic007G068700--Sobic008G008200 Sobic007G068700--Sobic010G180000 Sobic007G068700--Sobic009G239800 Sobic002G305400 Sobic002G305400 Sobic007G068700--Sobic002G305400 Sobic009G087900 Sobic009G087900 Sobic007G068700--Sobic009G087900 Sobic007G068700--Sobic004G167000 Sobic003G206100 Sobic003G206100 Sobic007G068700--Sobic003G206100 Sobic007G068700--Sobic008G087300 Sobic001G153800 Sobic001G153800 Sobic007G068700--Sobic001G153800 Sobic009G239800--Sobic008G008200 Sobic009G239800--Sobic008G087300 Sobic009G239800--Sobic004G167000 Sobic009G239800--Sobic001G303750 Sobic009G239800--Sobic010G180000 Sobic009G239800--Sobic001G266900 Sobic009G239800--Sobic007G068700 Sobic010G108100 Sobic010G108100 Sobic009G239800--Sobic010G108100 Sobic009G239800--Sobic008G138300 Sobic010G180000--Sobic008G138300 Sobic010G180000--Sobic001G266900 Sobic010G180000--Sobic003G162500 Sobic010G180000--Sobic008G008200 Sobic010G180000--Sobic004G167000 Sobic004G090700 Sobic004G090700 Sobic010G180000--Sobic004G090700 Sobic003G206200 Sobic003G206200 Sobic010G180000--Sobic003G206200 Sobic004G159200 Sobic004G159200 Sobic010G180000--Sobic004G159200 Sobic010G180000--Sobic008G087300 Sobic010G005900--Sobic002G305400 Sobic010G005900--Sobic009G087900 Sobic002G334400 Sobic002G334400 Sobic010G005900--Sobic002G334400 Sobic010G005900--Sobic003G206100 Sobic006G251301 Sobic006G251301 Sobic010G005900--Sobic006G251301 Sobic010G005900--Sobic001G153800 Sobic003G070200 Sobic003G070200 Sobic010G005900--Sobic003G070200 Sobic001G359100 Sobic001G359100 Sobic010G005900--Sobic001G359100 Sobic008G189800 Sobic008G189800 Sobic010G005900--Sobic008G189800 Sobic001G303750--Sobic009G239800 Sobic001G303750--Sobic008G008200 Sobic001G303750--Sobic008G087300 Sobic001G303750--Sobic004G167000 Sobic001G303750--Sobic001G266900 Sobic002G129500 Sobic002G129500 Sobic001G303750--Sobic002G129500 Sobic002G129700 Sobic002G129700 Sobic001G303750--Sobic002G129700 Sobic001G303750--Sobic007G064600 Sobic001G303750--Sobic010G180000
Octagon: transcription factors


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