Gene annotation
Transcriptome id Sobic.008G145300.5,Sobic.008G145300.4,Sobic.008G145300.3,Sobic.008G145300.6
Synonym NPY2, Sb08g019560
Functional annotation BTBN24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
UniProt A0A1B6PDR9
Pfam PF00651 PF03000
Panther DB PTHR32370 PTHR32370:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G14820 : Phototropic-responsive NPH3 family protein
RAP-DB (Rice) LOC_Os12g39380.1 : BTBN24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
MaizeGDB (Corn) Zm00025a004422 , Zm00025a027282
Brachypodium PNT76347 , KQJ86117 , KQK10073 , KQJ99936 , KQK19264 , KQJ86118 , KQK13304 , KQJ99984 , KQJ99983 , PNT61948 , PNT61949 , PNT61947
Barley HORVU7Hr1G030460.4 , HORVU7Hr1G030460.5 , HORVU7Hr1G030460.6 , HORVU7Hr1G030460.7 , HORVU7Hr1G030460.1 , HORVU7Hr1G030460.2 , HORVU7Hr1G030460.3 , HORVU7Hr1G030460.8 , HORVU7Hr1G030460.9 , HORVU7Hr1G030460.16 , HORVU7Hr1G030460.17 , HORVU7Hr1G030460.14 , HORVU7Hr1G030460.15 , HORVU7Hr1G030460.12 , HORVU7Hr1G030460.13 , HORVU7Hr1G030460.10 , HORVU7Hr1G030460.11 , HORVU7Hr1G030460.18 , HORVU7Hr1G030460.19 , HORVU0Hr1G012710.3 , HORVU0Hr1G012710.5 , HORVU0Hr1G012710.4 , HORVU0Hr1G012710.6 , HORVU5Hr1G093850.4 , HORVU5Hr1G093850.5 , HORVU5Hr1G093850.6 , HORVU5Hr1G093850.7 , HORVU5Hr1G093850.1 , HORVU5Hr1G093850.2 , HORVU5Hr1G093850.3 , HORVU5Hr1G093850.8 , HORVU5Hr1G093850.9 , HORVU6Hr1G022500.1 , HORVU6Hr1G022500.3 , HORVU6Hr1G022500.2 , HORVU6Hr1G022500.4 , HORVU0Hr1G012710.2 , HORVU3Hr1G076740.2 , HORVU3Hr1G076740.1 , HORVU5Hr1G093850.16 , HORVU5Hr1G093850.17 , HORVU5Hr1G093850.14 , HORVU5Hr1G093850.15 , HORVU5Hr1G093850.12 , HORVU5Hr1G093850.13 , HORVU5Hr1G093850.10 , HORVU5Hr1G093850.11 , HORVU5Hr1G098170.6 , HORVU5Hr1G098170.4 , HORVU5Hr1G098170.5 , HORVU5Hr1G098170.2 , HORVU5Hr1G098170.1 , HORVU5Hr1G098170.9 , HORVU1Hr1G034650.5 , HORVU1Hr1G034650.4 , HORVU1Hr1G034650.7 , HORVU1Hr1G034650.6 , HORVU1Hr1G034650.1 , HORVU1Hr1G034650.3 , HORVU1Hr1G034650.2
Wheat TraesCS5D02G175800 , TraesCS5D02G175800 , TraesCS7D02G150700 , TraesCS7D02G150700 , TraesCS5D02G082800 , TraesCS7A02G149100 , TraesCS2A02G526900 , TraesCS7B02G052800 , TraesCS7B02G052800 , TraesCS7B02G052800 , TraesCS5B02G168600 , TraesCS5B02G168600 , TraesCS5B02G168600 , TraesCS5B02G168600 , TraesCS5A02G171100 , TraesCS3A02G317300 , TraesCS5D02G413400 , TraesCS3D02G314000 , TraesCS7A02G149100 , TraesCS7A02G149100 , TraesCS3B02G349200 , TraesCS5A02G379300 , TraesCS5B02G076500 , TraesCS5B02G408200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G183800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.002G306300 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
3 Sobic.002G229800 DUF617 domain containing protein, expressed -
4 Sobic.007G113900 reticulon domain containing protein, putative, expressed -
5 Sobic.004G336700 helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.001G441700 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
7 Sobic.004G205500 expressed protein -
8 Sobic.005G169700 targeting protein for Xklp2, putative, expressed -
9 Sobic.003G174900 fimbrin-like protein 2, putative, expressed K17336: plastin-3
10 Sobic.001G535400 remorin, putative, expressed -
11 Sobic.008G156900 similar to Auxin-responsive protein IAA30(PubMedID : 29862293)@"domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf"(PubMedID : 20499123)@OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
12 Sobic.005G146300 Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
13 Sobic.006G278800 expressed protein -
14 Sobic.010G209800 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
15 Sobic.002G403100 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
16 Sobic.010G234900 armadillo/beta-catenin repeat family protein, putative, expressed -
17 Sobic.001G339400 proline-rich protein, putative, expressed -
18 Sobic.007G033300 plastocyanin-like domain containing protein, putative, expressed -
19 Sobic.002G330800 BTBN15 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
20 Sobic.004G199700 expressed protein -


Gene co-expression network
sample Sobic008G145300 Sobic008G145300 Sobic003G183800 Sobic003G183800 Sobic008G145300--Sobic003G183800 Sobic002G306300 Sobic002G306300 Sobic008G145300--Sobic002G306300 Sobic002G229800 Sobic002G229800 Sobic008G145300--Sobic002G229800 Sobic007G113900 Sobic007G113900 Sobic008G145300--Sobic007G113900 Sobic004G336700 Sobic004G336700 Sobic008G145300--Sobic004G336700 Sobic001G441700 Sobic001G441700 Sobic008G145300--Sobic001G441700 Sobic004G205500 Sobic004G205500 Sobic008G145300--Sobic004G205500 Sobic005G169700 Sobic005G169700 Sobic008G145300--Sobic005G169700 Sobic003G174900 Sobic003G174900 Sobic008G145300--Sobic003G174900 Sobic003G183800--Sobic008G145300 Sobic003G183800--Sobic001G441700 Sobic005G146300 Sobic005G146300 Sobic003G183800--Sobic005G146300 Sobic007G033300 Sobic007G033300 Sobic003G183800--Sobic007G033300 Sobic002G039400 Sobic002G039400 Sobic003G183800--Sobic002G039400 Sobic003G183800--Sobic005G169700 Sobic004G341300 Sobic004G341300 Sobic003G183800--Sobic004G341300 Sobic005G088500 Sobic005G088500 Sobic003G183800--Sobic005G088500 Sobic006G245300 Sobic006G245300 Sobic003G183800--Sobic006G245300 Sobic006G247500 Sobic006G247500 Sobic002G306300--Sobic006G247500 Sobic004G297800 Sobic004G297800 Sobic002G306300--Sobic004G297800 Sobic010G189800 Sobic010G189800 Sobic002G306300--Sobic010G189800 Sobic002G285300 Sobic002G285300 Sobic002G306300--Sobic002G285300 Sobic002G306300--Sobic008G145300 Sobic004G066300 Sobic004G066300 Sobic002G306300--Sobic004G066300 Sobic007G081300 Sobic007G081300 Sobic002G306300--Sobic007G081300 Sobic004G066000 Sobic004G066000 Sobic002G306300--Sobic004G066000 Sobic006G278800 Sobic006G278800 Sobic002G306300--Sobic006G278800 Sobic002G229800--Sobic006G278800 Sobic004G155900 Sobic004G155900 Sobic002G229800--Sobic004G155900 Sobic006G108000 Sobic006G108000 Sobic002G229800--Sobic006G108000 Sobic001G474300 Sobic001G474300 Sobic002G229800--Sobic001G474300 Sobic010G191100 Sobic010G191100 Sobic002G229800--Sobic010G191100 Sobic002G229800--Sobic004G336700 Sobic002G229800--Sobic008G145300 Sobic009G254400 Sobic009G254400 Sobic002G229800--Sobic009G254400 Sobic003G301200 Sobic003G301200 Sobic002G229800--Sobic003G301200 Sobic001G253900 Sobic001G253900 Sobic007G113900--Sobic001G253900 Sobic001G451800 Sobic001G451800 Sobic007G113900--Sobic001G451800 Sobic008G156900 Sobic008G156900 Sobic007G113900--Sobic008G156900 Sobic010G234900 Sobic010G234900 Sobic007G113900--Sobic010G234900 Sobic002G202500 Sobic002G202500 Sobic007G113900--Sobic002G202500 Sobic007G162000 Sobic007G162000 Sobic007G113900--Sobic007G162000 Sobic006G178800 Sobic006G178800 Sobic007G113900--Sobic006G178800 Sobic001G331100 Sobic001G331100 Sobic007G113900--Sobic001G331100 Sobic009G134000 Sobic009G134000 Sobic007G113900--Sobic009G134000 Sobic004G336700--Sobic002G202500 Sobic001G265300 Sobic001G265300 Sobic004G336700--Sobic001G265300 Sobic010G209800 Sobic010G209800 Sobic004G336700--Sobic010G209800 Sobic001G273100 Sobic001G273100 Sobic004G336700--Sobic001G273100 Sobic002G412400 Sobic002G412400 Sobic004G336700--Sobic002G412400 Sobic004G336700--Sobic002G229800 Sobic004G336700--Sobic006G108000 Sobic003G406500 Sobic003G406500 Sobic004G336700--Sobic003G406500 Sobic006G163600 Sobic006G163600 Sobic004G336700--Sobic006G163600 Sobic001G441700--Sobic004G341300 Sobic003G045700 Sobic003G045700 Sobic001G441700--Sobic003G045700 Sobic001G441700--Sobic002G039400 Sobic010G233900 Sobic010G233900 Sobic001G441700--Sobic010G233900 Sobic010G231600 Sobic010G231600 Sobic001G441700--Sobic010G231600 Sobic001G441700--Sobic003G183800 Sobic001G441700--Sobic005G146300 Sobic001G266600 Sobic001G266600 Sobic001G441700--Sobic001G266600 Sobic001G207600 Sobic001G207600 Sobic001G441700--Sobic001G207600 Sobic004G154600 Sobic004G154600 Sobic004G205500--Sobic004G154600 Sobic004G199700 Sobic004G199700 Sobic004G205500--Sobic004G199700 Sobic004G205500--Sobic003G174900 Sobic003G420201 Sobic003G420201 Sobic004G205500--Sobic003G420201 Sobic007G210900 Sobic007G210900 Sobic004G205500--Sobic007G210900 Sobic002G367300 Sobic002G367300 Sobic004G205500--Sobic002G367300 Sobic002G348700 Sobic002G348700 Sobic004G205500--Sobic002G348700 Sobic006G248300 Sobic006G248300 Sobic004G205500--Sobic006G248300 Sobic008G086200 Sobic008G086200 Sobic004G205500--Sobic008G086200 Sobic001G535400 Sobic001G535400 Sobic005G169700--Sobic001G535400 Sobic001G468300 Sobic001G468300 Sobic005G169700--Sobic001G468300 Sobic005G169700--Sobic003G183800 Sobic005G169700--Sobic005G146300 Sobic005G169700--Sobic007G033300 Sobic007G027200 Sobic007G027200 Sobic005G169700--Sobic007G027200 Sobic001G339400 Sobic001G339400 Sobic005G169700--Sobic001G339400 Sobic010G199700 Sobic010G199700 Sobic005G169700--Sobic010G199700 Sobic009G153800 Sobic009G153800 Sobic005G169700--Sobic009G153800 Sobic003G174900--Sobic004G199700 Sobic002G216600 Sobic002G216600 Sobic003G174900--Sobic002G216600 Sobic009G259500 Sobic009G259500 Sobic003G174900--Sobic009G259500 Sobic001G361800 Sobic001G361800 Sobic003G174900--Sobic001G361800 Sobic001G258100 Sobic001G258100 Sobic003G174900--Sobic001G258100 Sobic005G204100 Sobic005G204100 Sobic003G174900--Sobic005G204100 Sobic003G174900--Sobic002G348700 Sobic003G174900--Sobic008G086200 Sobic003G174900--Sobic004G205500
Octagon: transcription factors


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