Gene annotation
Transcriptome id Sobic.001G535400.1
Synonym Sb01g049810
Functional annotation remorin, putative, expressed
UniProt C5WMM5
Pfam PF03766 PF03763
Panther DB PTHR31775 PTHR31775:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48940 : Remorin family protein
RAP-DB (Rice) LOC_Os03g02040.1 : remorin, putative, expressed
MaizeGDB (Corn) Zm00025a000189
Brachypodium KQK24047
Barley HORVU4Hr1G089540.4 , HORVU4Hr1G089540.5 , HORVU4Hr1G089540.6 , HORVU4Hr1G089540.2 , HORVU4Hr1G089540.10 , HORVU2Hr1G091680.1 , HORVU2Hr1G091680.2 , HORVU2Hr1G091680.3 , HORVU2Hr1G091680.4 , HORVU2Hr1G091680.5 , HORVU2Hr1G091680.6 , HORVU2Hr1G091680.7
Wheat TraesCSU02G033600 , TraesCS2B02G386900 , TraesCS2D02G366300 , TraesCS2D02G366300 , TraesCS2A02G369800 , TraesCS2A02G369800 , TraesCS5A02G554600 , TraesCS4B02G393000
Populus -


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cDNA sequences
Sobic.001G535400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K05280: flavonoid 3'-monooxygenase
2 Sobic.005G169700 targeting protein for Xklp2, putative, expressed -
3 Sobic.002G205500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@CESA9 - cellulose synthase, expressed K10999: cellulose synthase A
4 Sobic.003G296400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CESA4 - cellulose synthase, expressed K10999: cellulose synthase A
5 Sobic.001G339400 proline-rich protein, putative, expressed -
6 Sobic.001G224300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 28944535)@CESA7 - cellulose synthase, expressed K10999: cellulose synthase A
7 Sobic.010G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.002G003200 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.003G062000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
10 Sobic.004G163600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.009G153800 protein kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
12 Sobic.006G036400 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.001G468300 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
14 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
15 Sobic.002G045800 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
16 Sobic.003G427900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
17 Sobic.008G145300 BTBN24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
18 Sobic.009G032600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.003G151300 serine/threonine-protein kinase, putative, expressed -
20 Sobic.007G223600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I


Gene co-expression network
sample Sobic001G535400 Sobic001G535400 Sobic009G162500 Sobic009G162500 Sobic001G535400--Sobic009G162500 Sobic005G169700 Sobic005G169700 Sobic001G535400--Sobic005G169700 Sobic002G205500 Sobic002G205500 Sobic001G535400--Sobic002G205500 Sobic003G296400 Sobic003G296400 Sobic001G535400--Sobic003G296400 Sobic001G339400 Sobic001G339400 Sobic001G535400--Sobic001G339400 Sobic001G224300 Sobic001G224300 Sobic001G535400--Sobic001G224300 Sobic010G086800 Sobic010G086800 Sobic001G535400--Sobic010G086800 Sobic002G003200 Sobic002G003200 Sobic001G535400--Sobic002G003200 Sobic003G062000 Sobic003G062000 Sobic001G535400--Sobic003G062000 Sobic009G162500--Sobic003G296400 Sobic009G162500--Sobic002G205500 Sobic009G162500--Sobic003G062000 Sobic003G151300 Sobic003G151300 Sobic009G162500--Sobic003G151300 Sobic009G162500--Sobic002G003200 Sobic003G366300 Sobic003G366300 Sobic009G162500--Sobic003G366300 Sobic009G162500--Sobic001G535400 Sobic009G153800 Sobic009G153800 Sobic009G162500--Sobic009G153800 Sobic009G032600 Sobic009G032600 Sobic009G162500--Sobic009G032600 Sobic005G169700--Sobic001G535400 Sobic001G468300 Sobic001G468300 Sobic005G169700--Sobic001G468300 Sobic003G183800 Sobic003G183800 Sobic005G169700--Sobic003G183800 Sobic005G146300 Sobic005G146300 Sobic005G169700--Sobic005G146300 Sobic007G033300 Sobic007G033300 Sobic005G169700--Sobic007G033300 Sobic007G027200 Sobic007G027200 Sobic005G169700--Sobic007G027200 Sobic005G169700--Sobic001G339400 Sobic010G199700 Sobic010G199700 Sobic005G169700--Sobic010G199700 Sobic005G169700--Sobic009G153800 Sobic002G205500--Sobic003G296400 Sobic002G205500--Sobic001G224300 Sobic007G223600 Sobic007G223600 Sobic002G205500--Sobic007G223600 Sobic006G226200 Sobic006G226200 Sobic002G205500--Sobic006G226200 Sobic005G229100 Sobic005G229100 Sobic002G205500--Sobic005G229100 Sobic003G387500 Sobic003G387500 Sobic002G205500--Sobic003G387500 Sobic009G048000 Sobic009G048000 Sobic002G205500--Sobic009G048000 Sobic006G036400 Sobic006G036400 Sobic002G205500--Sobic006G036400 Sobic009G226900 Sobic009G226900 Sobic002G205500--Sobic009G226900 Sobic003G296400--Sobic002G205500 Sobic003G296400--Sobic001G224300 Sobic003G296400--Sobic006G036400 Sobic003G296400--Sobic007G223600 Sobic003G296400--Sobic006G226200 Sobic003G296400--Sobic009G226900 Sobic003G296400--Sobic009G048000 Sobic004G221300 Sobic004G221300 Sobic003G296400--Sobic004G221300 Sobic003G236701 Sobic003G236701 Sobic003G296400--Sobic003G236701 Sobic001G339400--Sobic003G151300 Sobic009G102800 Sobic009G102800 Sobic001G339400--Sobic009G102800 Sobic001G339400--Sobic001G535400 Sobic004G205500 Sobic004G205500 Sobic001G339400--Sobic004G205500 Sobic001G339400--Sobic005G169700 Sobic003G174900 Sobic003G174900 Sobic001G339400--Sobic003G174900 Sobic003G420800 Sobic003G420800 Sobic001G339400--Sobic003G420800 Sobic009G175200 Sobic009G175200 Sobic001G339400--Sobic009G175200 Sobic001G195000 Sobic001G195000 Sobic001G339400--Sobic001G195000 Sobic001G224300--Sobic003G296400 Sobic001G224300--Sobic002G205500 Sobic001G224300--Sobic006G036400 Sobic001G224300--Sobic003G387500 Sobic001G224300--Sobic009G226900 Sobic001G224300--Sobic007G223600 Sobic009G034300 Sobic009G034300 Sobic001G224300--Sobic009G034300 Sobic001G224300--Sobic004G221300 Sobic001G409100 Sobic001G409100 Sobic001G224300--Sobic001G409100 Sobic010G086800--Sobic003G062000 Sobic004G168700 Sobic004G168700 Sobic010G086800--Sobic004G168700 Sobic010G086800--Sobic009G032600 Sobic010G086800--Sobic006G036400 Sobic010G086800--Sobic009G226900 Sobic003G427900 Sobic003G427900 Sobic010G086800--Sobic003G427900 Sobic002G072200 Sobic002G072200 Sobic010G086800--Sobic002G072200 Sobic001G107100 Sobic001G107100 Sobic010G086800--Sobic001G107100 Sobic010G086800--Sobic009G162500 Sobic003G352800 Sobic003G352800 Sobic002G003200--Sobic003G352800 Sobic002G003200--Sobic009G153800 Sobic004G344200 Sobic004G344200 Sobic002G003200--Sobic004G344200 Sobic001G405000 Sobic001G405000 Sobic002G003200--Sobic001G405000 Sobic008G059800 Sobic008G059800 Sobic002G003200--Sobic008G059800 Sobic006G001000 Sobic006G001000 Sobic002G003200--Sobic006G001000 Sobic002G003200--Sobic009G162500 Sobic001G066900 Sobic001G066900 Sobic002G003200--Sobic001G066900 Sobic008G163000 Sobic008G163000 Sobic002G003200--Sobic008G163000 Sobic003G062000--Sobic009G226900 Sobic003G062000--Sobic006G036400 Sobic003G062000--Sobic010G086800 Sobic003G062000--Sobic001G224300 Sobic003G062000--Sobic003G296400 Sobic003G062000--Sobic002G072200 Sobic006G075000 Sobic006G075000 Sobic003G062000--Sobic006G075000 Sobic003G062000--Sobic009G032600 Sobic003G386200 Sobic003G386200 Sobic003G062000--Sobic003G386200
Octagon: transcription factors


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