Gene annotation
Transcriptome id Sobic.002G306300.1
Synonym Sb02g033650
Functional annotation nucleobase-ascorbate transporter, putative, expressed
UniProt C5X968
Pfam PF00860
Panther DB PTHR11119 PTHR11119:SF54
NCBI CDD KOG1292; Xanthine/uracil transporters
KEGG Orthology K14611; SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT4G38050 : Xanthine/uracil permease family protein
RAP-DB (Rice) LOC_Os07g30810.1 : nucleobase-ascorbate transporter, putative, expressed
MaizeGDB (Corn) Zm00025a047356 , Zm00025a055488 , Zm00025a048087 , Zm00025a014688 , Zm00025a048395 , Zm00025a034964
Brachypodium KQK16170
Barley HORVU2Hr1G050280.10 , HORVU2Hr1G050280.3 , HORVU2Hr1G050280.2 , HORVU2Hr1G050280.1 , HORVU2Hr1G050280.7 , HORVU2Hr1G050280.6 , HORVU2Hr1G050280.5 , HORVU2Hr1G050280.4 , HORVU2Hr1G050280.9 , HORVU2Hr1G050280.8
Wheat TraesCS2B02G253700 , TraesCS2B02G253700 , TraesCS2B02G253700 , TraesCS2D02G239200 , TraesCS2D02G239200 , TraesCS2A02G233800 , TraesCS2A02G233800 , TraesCS2A02G233800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G247500 terpene synthase, putative, expressed -
2 Sobic.004G297800 transferase family protein, putative, expressed -
3 Sobic.010G189800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
4 Sobic.002G285300 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsSAUR53 - Auxin-responsive SAUR gene family member, expressed -
5 Sobic.008G145300 BTBN24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
6 Sobic.004G066300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.007G081300 peptide transporter PTR2, putative, expressed -
8 Sobic.004G066000 expressed protein -
9 Sobic.006G278800 expressed protein -
10 Sobic.007G027301 - -
11 Sobic.004G327500 hydrolase, NUDIX family, domain containing protein, expressed -
12 Sobic.005G072700 expressed protein -
13 Sobic.006G163600 Trihelix Family(PubMedID : 24864043)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
14 Sobic.004G275500 helix-loop-helix DNA-binding protein, putative, expressed -
15 Sobic.007G156101 - -
16 Sobic.006G278400 ZOS4-14 - C2H2 zinc finger protein, expressed -
17 Sobic.003G301200 expressed protein -
18 Sobic.009G154000 ATOFP18/OFP18, putative, expressed -
19 Sobic.006G280300 anthranilate phosphoribosyltransferase, putative, expressed -
20 Sobic.006G157300 expressed protein -


Gene co-expression network
sample Sobic002G306300 Sobic002G306300 Sobic006G247500 Sobic006G247500 Sobic002G306300--Sobic006G247500 Sobic004G297800 Sobic004G297800 Sobic002G306300--Sobic004G297800 Sobic010G189800 Sobic010G189800 Sobic002G306300--Sobic010G189800 Sobic002G285300 Sobic002G285300 Sobic002G306300--Sobic002G285300 Sobic008G145300 Sobic008G145300 Sobic002G306300--Sobic008G145300 Sobic004G066300 Sobic004G066300 Sobic002G306300--Sobic004G066300 Sobic007G081300 Sobic007G081300 Sobic002G306300--Sobic007G081300 Sobic004G066000 Sobic004G066000 Sobic002G306300--Sobic004G066000 Sobic006G278800 Sobic006G278800 Sobic002G306300--Sobic006G278800 SobicK044200 SobicK044200 Sobic006G247500--SobicK044200 Sobic009G154000 Sobic009G154000 Sobic006G247500--Sobic009G154000 Sobic002G425900 Sobic002G425900 Sobic006G247500--Sobic002G425900 Sobic001G180300 Sobic001G180300 Sobic006G247500--Sobic001G180300 Sobic008G028500 Sobic008G028500 Sobic006G247500--Sobic008G028500 Sobic010G178900 Sobic010G178900 Sobic006G247500--Sobic010G178900 Sobic004G128600 Sobic004G128600 Sobic006G247500--Sobic004G128600 Sobic004G330400 Sobic004G330400 Sobic006G247500--Sobic004G330400 Sobic006G187600 Sobic006G187600 Sobic006G247500--Sobic006G187600 Sobic006G079100 Sobic006G079100 Sobic004G297800--Sobic006G079100 Sobic008G131200 Sobic008G131200 Sobic004G297800--Sobic008G131200 Sobic004G297800--Sobic006G247500 Sobic004G297800--SobicK044200 Sobic010G014200 Sobic010G014200 Sobic004G297800--Sobic010G014200 Sobic004G297800--Sobic004G128600 Sobic006G280300 Sobic006G280300 Sobic004G297800--Sobic006G280300 Sobic001G362800 Sobic001G362800 Sobic004G297800--Sobic001G362800 Sobic001G115800 Sobic001G115800 Sobic004G297800--Sobic001G115800 Sobic010G189800--Sobic007G081300 Sobic004G192700 Sobic004G192700 Sobic010G189800--Sobic004G192700 Sobic003G092200 Sobic003G092200 Sobic010G189800--Sobic003G092200 Sobic010G189800--Sobic006G187600 Sobic010G073300 Sobic010G073300 Sobic010G189800--Sobic010G073300 Sobic007G149600 Sobic007G149600 Sobic010G189800--Sobic007G149600 Sobic004G227000 Sobic004G227000 Sobic010G189800--Sobic004G227000 Sobic003G301200 Sobic003G301200 Sobic010G189800--Sobic003G301200 Sobic001G441800 Sobic001G441800 Sobic010G189800--Sobic001G441800 Sobic004G284400 Sobic004G284400 Sobic002G285300--Sobic004G284400 Sobic003G397000 Sobic003G397000 Sobic002G285300--Sobic003G397000 Sobic001G017900 Sobic001G017900 Sobic002G285300--Sobic001G017900 Sobic002G285300--Sobic006G247500 Sobic002G285300--Sobic009G154000 Sobic002G320200 Sobic002G320200 Sobic002G285300--Sobic002G320200 Sobic010G036000 Sobic010G036000 Sobic002G285300--Sobic010G036000 Sobic002G285300--SobicK044200 Sobic006G192400 Sobic006G192400 Sobic002G285300--Sobic006G192400 Sobic003G183800 Sobic003G183800 Sobic008G145300--Sobic003G183800 Sobic008G145300--Sobic002G306300 Sobic002G229800 Sobic002G229800 Sobic008G145300--Sobic002G229800 Sobic007G113900 Sobic007G113900 Sobic008G145300--Sobic007G113900 Sobic004G336700 Sobic004G336700 Sobic008G145300--Sobic004G336700 Sobic001G441700 Sobic001G441700 Sobic008G145300--Sobic001G441700 Sobic004G205500 Sobic004G205500 Sobic008G145300--Sobic004G205500 Sobic005G169700 Sobic005G169700 Sobic008G145300--Sobic005G169700 Sobic003G174900 Sobic003G174900 Sobic008G145300--Sobic003G174900 Sobic001G030200 Sobic001G030200 Sobic004G066300--Sobic001G030200 Sobic004G353900 Sobic004G353900 Sobic004G066300--Sobic004G353900 Sobic004G066300--Sobic008G131200 Sobic004G066300--Sobic001G115800 Sobic004G066300--SobicK044200 Sobic010G208000 Sobic010G208000 Sobic004G066300--Sobic010G208000 Sobic004G066300--Sobic004G297800 Sobic004G066300--Sobic006G247500 Sobic004G066300--Sobic009G154000 Sobic007G081300--Sobic003G301200 Sobic006G278400 Sobic006G278400 Sobic007G081300--Sobic006G278400 Sobic007G081300--Sobic010G189800 Sobic007G081300--Sobic001G180300 Sobic007G081300--Sobic003G092200 Sobic007G081300--Sobic004G227000 Sobic007G081300--Sobic007G149600 Sobic007G081300--Sobic006G187600 Sobic006G005000 Sobic006G005000 Sobic007G081300--Sobic006G005000 Sobic004G275500 Sobic004G275500 Sobic004G066000--Sobic004G275500 Sobic001G158000 Sobic001G158000 Sobic004G066000--Sobic001G158000 Sobic007G221800 Sobic007G221800 Sobic004G066000--Sobic007G221800 Sobic004G066000--Sobic007G149600 Sobic004G066000--Sobic007G081300 Sobic004G265400 Sobic004G265400 Sobic004G066000--Sobic004G265400 Sobic001G519300 Sobic001G519300 Sobic004G066000--Sobic001G519300 Sobic001G193400 Sobic001G193400 Sobic004G066000--Sobic001G193400 Sobic003G067300 Sobic003G067300 Sobic004G066000--Sobic003G067300 Sobic006G278800--Sobic002G229800 Sobic004G155900 Sobic004G155900 Sobic006G278800--Sobic004G155900 Sobic004G059100 Sobic004G059100 Sobic006G278800--Sobic004G059100 Sobic006G278800--Sobic002G306300 Sobic001G474300 Sobic001G474300 Sobic006G278800--Sobic001G474300 Sobic006G278800--Sobic008G145300 Sobic006G108000 Sobic006G108000 Sobic006G278800--Sobic006G108000 Sobic002G348700 Sobic002G348700 Sobic006G278800--Sobic002G348700 Sobic009G254400 Sobic009G254400 Sobic006G278800--Sobic009G254400
Octagon: transcription factors


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