Gene annotation
Transcriptome id Sobic.004G066300.1
Synonym Sb04g005560
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XWW3
Pfam -
Panther DB PTHR37200 PTHR37200:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G70200 : RNA-binding (RRM/RBD/RNP motifs) family protein
RAP-DB (Rice) LOC_Os02g22070.1 : expressed protein
MaizeGDB (Corn) Zm00025a019242
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G030200 transcription termination factor nusG family protein, expressed -
2 Sobic.004G353900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase/ transition metal ion binding protein, putative, expressed -
3 Sobic.008G131200 DUF538 domain containing protein, putative, expressed -
4 Sobic.001G115800 expressed protein -
5 Sobic.K044200 - -
6 Sobic.010G208000 ribosomal protein L35, putative, expressed K02916: RP-L35, MRPL35, large subunit ribosomal protein L35
7 Sobic.004G297800 transferase family protein, putative, expressed -
8 Sobic.006G247500 terpene synthase, putative, expressed -
9 Sobic.009G154000 ATOFP18/OFP18, putative, expressed -
10 Sobic.004G016700 expressed protein -
11 Sobic.004G034500 ribosomal protein L3, putative, expressed K02906: RP-L3, MRPL3, large subunit ribosomal protein L3
12 Sobic.006G079100 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
13 Sobic.004G072000 ribosome, putative, expressed -
14 Sobic.008G139900 expressed protein -
15 Sobic.004G128600 salt stress root protein RS1, putative, expressed -
16 Sobic.008G028500 expressed protein -
17 Sobic.006G280300 anthranilate phosphoribosyltransferase, putative, expressed -
18 Sobic.006G197000 heavy-metal-associated domain-containing protein, putative, expressed -
19 Sobic.002G320200 cytochrome P450, putative, expressed -
20 Sobic.002G019900 gibberellin receptor GID1L2, putative, expressed -


Gene co-expression network
sample Sobic004G066300 Sobic004G066300 Sobic001G030200 Sobic001G030200 Sobic004G066300--Sobic001G030200 Sobic004G353900 Sobic004G353900 Sobic004G066300--Sobic004G353900 Sobic008G131200 Sobic008G131200 Sobic004G066300--Sobic008G131200 Sobic001G115800 Sobic001G115800 Sobic004G066300--Sobic001G115800 SobicK044200 SobicK044200 Sobic004G066300--SobicK044200 Sobic010G208000 Sobic010G208000 Sobic004G066300--Sobic010G208000 Sobic004G297800 Sobic004G297800 Sobic004G066300--Sobic004G297800 Sobic006G247500 Sobic006G247500 Sobic004G066300--Sobic006G247500 Sobic009G154000 Sobic009G154000 Sobic004G066300--Sobic009G154000 Sobic001G030200--Sobic010G208000 Sobic002G019900 Sobic002G019900 Sobic001G030200--Sobic002G019900 Sobic001G030200--Sobic004G066300 Sobic001G516800 Sobic001G516800 Sobic001G030200--Sobic001G516800 Sobic001G030200--Sobic004G353900 Sobic001G030200--Sobic008G131200 Sobic004G016700 Sobic004G016700 Sobic001G030200--Sobic004G016700 Sobic004G034500 Sobic004G034500 Sobic001G030200--Sobic004G034500 Sobic004G072000 Sobic004G072000 Sobic001G030200--Sobic004G072000 Sobic004G353900--Sobic004G066300 Sobic004G353900--Sobic001G030200 Sobic004G353900--Sobic010G208000 Sobic004G353900--Sobic004G034500 Sobic009G010900 Sobic009G010900 Sobic004G353900--Sobic009G010900 Sobic004G353900--Sobic008G131200 Sobic009G083000 Sobic009G083000 Sobic004G353900--Sobic009G083000 Sobic004G353900--Sobic001G516800 Sobic001G094200 Sobic001G094200 Sobic004G353900--Sobic001G094200 Sobic008G131200--Sobic001G115800 Sobic008G131200--Sobic004G297800 Sobic008G139900 Sobic008G139900 Sobic008G131200--Sobic008G139900 Sobic008G131200--Sobic004G072000 Sobic010G258700 Sobic010G258700 Sobic008G131200--Sobic010G258700 Sobic008G131200--Sobic006G247500 Sobic008G131200--Sobic004G066300 Sobic006G079100 Sobic006G079100 Sobic008G131200--Sobic006G079100 Sobic003G013100 Sobic003G013100 Sobic008G131200--Sobic003G013100 Sobic004G275500 Sobic004G275500 Sobic001G115800--Sobic004G275500 Sobic003G102800 Sobic003G102800 Sobic001G115800--Sobic003G102800 Sobic001G115800--Sobic010G258700 Sobic003G120400 Sobic003G120400 Sobic001G115800--Sobic003G120400 Sobic002G284901 Sobic002G284901 Sobic001G115800--Sobic002G284901 Sobic001G193400 Sobic001G193400 Sobic001G115800--Sobic001G193400 Sobic001G519300 Sobic001G519300 Sobic001G115800--Sobic001G519300 Sobic002G320900 Sobic002G320900 Sobic001G115800--Sobic002G320900 Sobic010G073300 Sobic010G073300 Sobic001G115800--Sobic010G073300 Sobic002G425900 Sobic002G425900 SobicK044200--Sobic002G425900 SobicK044200--Sobic009G154000 Sobic004G330400 Sobic004G330400 SobicK044200--Sobic004G330400 Sobic003G109400 Sobic003G109400 SobicK044200--Sobic003G109400 Sobic004G354800 Sobic004G354800 SobicK044200--Sobic004G354800 Sobic001G255700 Sobic001G255700 SobicK044200--Sobic001G255700 Sobic009G163500 Sobic009G163500 SobicK044200--Sobic009G163500 Sobic002G284800 Sobic002G284800 SobicK044200--Sobic002G284800 Sobic010G224800 Sobic010G224800 SobicK044200--Sobic010G224800 Sobic010G208000--Sobic001G030200 Sobic010G208000--Sobic001G516800 Sobic010G208000--Sobic004G072000 Sobic010G208000--Sobic004G034500 Sobic010G208000--Sobic002G019900 Sobic010G208000--Sobic008G131200 Sobic009G179800 Sobic009G179800 Sobic010G208000--Sobic009G179800 Sobic004G204500 Sobic004G204500 Sobic010G208000--Sobic004G204500 Sobic010G208000--Sobic004G066300 Sobic004G297800--Sobic006G079100 Sobic004G297800--Sobic008G131200 Sobic004G297800--Sobic006G247500 Sobic004G297800--SobicK044200 Sobic010G014200 Sobic010G014200 Sobic004G297800--Sobic010G014200 Sobic004G128600 Sobic004G128600 Sobic004G297800--Sobic004G128600 Sobic006G280300 Sobic006G280300 Sobic004G297800--Sobic006G280300 Sobic001G362800 Sobic001G362800 Sobic004G297800--Sobic001G362800 Sobic004G297800--Sobic001G115800 Sobic006G247500--SobicK044200 Sobic006G247500--Sobic009G154000 Sobic006G247500--Sobic002G425900 Sobic001G180300 Sobic001G180300 Sobic006G247500--Sobic001G180300 Sobic008G028500 Sobic008G028500 Sobic006G247500--Sobic008G028500 Sobic010G178900 Sobic010G178900 Sobic006G247500--Sobic010G178900 Sobic006G247500--Sobic004G128600 Sobic006G247500--Sobic004G330400 Sobic006G187600 Sobic006G187600 Sobic006G247500--Sobic006G187600 Sobic009G154000--SobicK044200 Sobic009G154000--Sobic002G425900 Sobic009G154000--Sobic004G128600 Sobic010G114400 Sobic010G114400 Sobic009G154000--Sobic010G114400 Sobic009G154000--Sobic004G330400 Sobic009G154000--Sobic010G224800 Sobic009G154000--Sobic002G284800 Sobic009G154000--Sobic001G255700 Sobic003G368150 Sobic003G368150 Sobic009G154000--Sobic003G368150
Octagon: transcription factors


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