Gene annotation
Transcriptome id Sobic.002G019900.1
Synonym CXE12, Sb02g001850, ATCXE12
Functional annotation gibberellin receptor GID1L2, putative, expressed
UniProt C5X8N0
Pfam PF12695
Panther DB PTHR23024 PTHR23024:SF225
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48700 : carboxyesterase 13
RAP-DB (Rice) LOC_Os07g34370.1 : gibberellin receptor, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK19827
Barley HORVU2Hr1G003300.1 , HORVU2Hr1G002620.1 , HORVU7Hr1G009170.1
Wheat TraesCS4A02G436500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G030200 transcription termination factor nusG family protein, expressed -
2 Sobic.002G285450 - -
3 Sobic.010G208000 ribosomal protein L35, putative, expressed K02916: RP-L35, MRPL35, large subunit ribosomal protein L35
4 Sobic.001G516800 signal recognition particle 43 kDa protein, chloroplast precursor, putative, expressed K12271: SRP43, signal recognition particle 43 kDa protein
5 Sobic.007G139000 ZF-HD protein dimerisation region containing protein, expressed -
6 Sobic.003G111600 expressed protein -
7 Sobic.004G016700 expressed protein -
8 Sobic.001G460700 expressed protein -
9 Sobic.002G406400 PPR repeat domain containing protein, putative, expressed -
10 Sobic.004G066300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.001G263500 glycosyl hydrolases family 17, putative, expressed -
12 Sobic.001G397900 "Controlling grain color, orthologous to the maize p1"(PubMedID : 20585750)@"induction of chs, chi, dfr, f3'h 3-deoxyanthocyanidins biosynthesis responsive genes "(PubMedID : 25647576)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.002G283800 AIG2-like family domain containing protein, expressed -
14 Sobic.009G010900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD dependent epimerase/dehydratase family protein, putative, expressed -
15 Sobic.010G136900 white-brown complex homolog protein 11, putative, expressed -
16 Sobic.004G328700 transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
17 Sobic.003G191800 helix-loop-helix DNA-binding domain containing protein, expressed -
18 Sobic.002G101800 OsFBX281 - F-box domain containing protein, expressed -
19 Sobic.010G179000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
20 Sobic.008G131200 DUF538 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G019900 Sobic002G019900 Sobic001G030200 Sobic001G030200 Sobic002G019900--Sobic001G030200 Sobic002G285450 Sobic002G285450 Sobic002G019900--Sobic002G285450 Sobic010G208000 Sobic010G208000 Sobic002G019900--Sobic010G208000 Sobic001G516800 Sobic001G516800 Sobic002G019900--Sobic001G516800 Sobic007G139000 Sobic007G139000 Sobic002G019900--Sobic007G139000 Sobic003G111600 Sobic003G111600 Sobic002G019900--Sobic003G111600 Sobic004G016700 Sobic004G016700 Sobic002G019900--Sobic004G016700 Sobic001G460700 Sobic001G460700 Sobic002G019900--Sobic001G460700 Sobic002G406400 Sobic002G406400 Sobic002G019900--Sobic002G406400 Sobic001G030200--Sobic010G208000 Sobic001G030200--Sobic002G019900 Sobic004G066300 Sobic004G066300 Sobic001G030200--Sobic004G066300 Sobic001G030200--Sobic001G516800 Sobic004G353900 Sobic004G353900 Sobic001G030200--Sobic004G353900 Sobic008G131200 Sobic008G131200 Sobic001G030200--Sobic008G131200 Sobic001G030200--Sobic004G016700 Sobic004G034500 Sobic004G034500 Sobic001G030200--Sobic004G034500 Sobic004G072000 Sobic004G072000 Sobic001G030200--Sobic004G072000 Sobic002G285450--Sobic002G019900 Sobic002G285450--Sobic002G406400 Sobic009G157000 Sobic009G157000 Sobic002G285450--Sobic009G157000 Sobic002G283800 Sobic002G283800 Sobic002G285450--Sobic002G283800 Sobic004G132400 Sobic004G132400 Sobic002G285450--Sobic004G132400 Sobic002G285450--Sobic001G516800 Sobic009G010900 Sobic009G010900 Sobic002G285450--Sobic009G010900 Sobic002G285450--Sobic001G030200 Sobic002G285450--Sobic007G139000 Sobic010G208000--Sobic001G030200 Sobic010G208000--Sobic001G516800 Sobic010G208000--Sobic004G072000 Sobic010G208000--Sobic004G034500 Sobic010G208000--Sobic002G019900 Sobic010G208000--Sobic008G131200 Sobic009G179800 Sobic009G179800 Sobic010G208000--Sobic009G179800 Sobic004G204500 Sobic004G204500 Sobic010G208000--Sobic004G204500 Sobic010G208000--Sobic004G066300 Sobic001G516800--Sobic010G208000 Sobic001G516800--Sobic002G283800 Sobic001G516800--Sobic001G030200 Sobic001G147400 Sobic001G147400 Sobic001G516800--Sobic001G147400 Sobic001G516800--Sobic004G034500 Sobic002G088200 Sobic002G088200 Sobic001G516800--Sobic002G088200 Sobic001G516800--Sobic002G019900 Sobic001G543500 Sobic001G543500 Sobic001G516800--Sobic001G543500 Sobic001G516800--Sobic009G179800 Sobic003G191800 Sobic003G191800 Sobic007G139000--Sobic003G191800 Sobic005G102200 Sobic005G102200 Sobic007G139000--Sobic005G102200 Sobic001G137200 Sobic001G137200 Sobic007G139000--Sobic001G137200 Sobic010G152700 Sobic010G152700 Sobic007G139000--Sobic010G152700 Sobic002G101800 Sobic002G101800 Sobic007G139000--Sobic002G101800 Sobic007G139000--Sobic003G111600 Sobic001G483700 Sobic001G483700 Sobic007G139000--Sobic001G483700 Sobic002G285525 Sobic002G285525 Sobic007G139000--Sobic002G285525 Sobic010G014900 Sobic010G014900 Sobic007G139000--Sobic010G014900 Sobic003G111600--Sobic005G102200 Sobic003G111600--Sobic003G191800 Sobic003G111600--Sobic007G139000 Sobic003G111600--Sobic002G101800 Sobic003G111600--Sobic001G483700 Sobic003G111600--Sobic001G137200 Sobic003G111600--Sobic010G152700 Sobic003G111600--Sobic002G285525 Sobic009G187500 Sobic009G187500 Sobic003G111600--Sobic009G187500 Sobic003G397000 Sobic003G397000 Sobic004G016700--Sobic003G397000 Sobic002G320200 Sobic002G320200 Sobic004G016700--Sobic002G320200 Sobic004G016700--Sobic001G460700 Sobic004G016700--Sobic001G030200 Sobic006G280300 Sobic006G280300 Sobic004G016700--Sobic006G280300 Sobic003G396900 Sobic003G396900 Sobic004G016700--Sobic003G396900 Sobic010G179000 Sobic010G179000 Sobic004G016700--Sobic010G179000 Sobic004G016700--Sobic004G066300 Sobic004G297800 Sobic004G297800 Sobic004G016700--Sobic004G297800 Sobic010G029200 Sobic010G029200 Sobic001G460700--Sobic010G029200 Sobic010G208300 Sobic010G208300 Sobic001G460700--Sobic010G208300 Sobic003G283750 Sobic003G283750 Sobic001G460700--Sobic003G283750 Sobic009G039400 Sobic009G039400 Sobic001G460700--Sobic009G039400 Sobic003G142900 Sobic003G142900 Sobic001G460700--Sobic003G142900 Sobic010G068300 Sobic010G068300 Sobic001G460700--Sobic010G068300 Sobic003G081400 Sobic003G081400 Sobic001G460700--Sobic003G081400 Sobic006G133650 Sobic006G133650 Sobic001G460700--Sobic006G133650 Sobic008G031600 Sobic008G031600 Sobic001G460700--Sobic008G031600 Sobic002G406400--Sobic002G285450 Sobic003G202300 Sobic003G202300 Sobic002G406400--Sobic003G202300 Sobic001G094200 Sobic001G094200 Sobic002G406400--Sobic001G094200 Sobic010G072900 Sobic010G072900 Sobic002G406400--Sobic010G072900 Sobic002G406400--Sobic009G010900 Sobic002G406400--Sobic001G516800 Sobic004G191200 Sobic004G191200 Sobic002G406400--Sobic004G191200 Sobic002G406400--Sobic001G030200 Sobic002G406400--Sobic002G019900
Octagon: transcription factors


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