Gene annotation
Transcriptome id Sobic.004G328700.1
Synonym HCT, Sb04g035780
Functional annotation transferase family protein, putative, expressed
UniProt C5XUF0
Pfam PF02458
Panther DB PTHR31642 PTHR31642:SF15
NCBI CDD -
KEGG Orthology K13065; E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT5G48930 : hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
RAP-DB (Rice) LOC_Os06g08580.1 : transferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a022451 , Zm00025a047051
Brachypodium KQK19258 , KQJ90283 , PNT64606
Barley HORVU7Hr1G030670.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G263500 glycosyl hydrolases family 17, putative, expressed -
2 Sobic.004G016700 expressed protein -
3 Sobic.001G030200 transcription termination factor nusG family protein, expressed -
4 Sobic.002G019900 gibberellin receptor GID1L2, putative, expressed -
5 Sobic.008G035600 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
6 Sobic.010G179000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
7 Sobic.009G083000 OsRhmbd12 - Putative Rhomboid homologue, expressed -
8 Sobic.001G460700 expressed protein -
9 Sobic.003G239700 proteins of unknown function domain containing protein, expressed -
10 Sobic.006G280300 anthranilate phosphoribosyltransferase, putative, expressed -
11 Sobic.006G079100 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
12 Sobic.009G254400 polygalacturonase inhibitor 1 precursor, putative, expressed -
13 Sobic.002G101800 OsFBX281 - F-box domain containing protein, expressed -
14 Sobic.001G422800 aspartic proteinase nepenthesin precursor, putative, expressed -
15 Sobic.007G139000 ZF-HD protein dimerisation region containing protein, expressed -
16 Sobic.009G024133 - -
17 Sobic.001G397900 "Controlling grain color, orthologous to the maize p1"(PubMedID : 20585750)@"induction of chs, chi, dfr, f3'h 3-deoxyanthocyanidins biosynthesis responsive genes "(PubMedID : 25647576)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.001G516800 signal recognition particle 43 kDa protein, chloroplast precursor, putative, expressed K12271: SRP43, signal recognition particle 43 kDa protein
19 Sobic.008G088863 - -
20 Sobic.002G110800 mitochondrial carrier protein, putative, expressed K15111: solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26


Gene co-expression network
sample Sobic004G328700 Sobic004G328700 Sobic001G263500 Sobic001G263500 Sobic004G328700--Sobic001G263500 Sobic004G016700 Sobic004G016700 Sobic004G328700--Sobic004G016700 Sobic001G030200 Sobic001G030200 Sobic004G328700--Sobic001G030200 Sobic002G019900 Sobic002G019900 Sobic004G328700--Sobic002G019900 Sobic008G035600 Sobic008G035600 Sobic004G328700--Sobic008G035600 Sobic010G179000 Sobic010G179000 Sobic004G328700--Sobic010G179000 Sobic009G083000 Sobic009G083000 Sobic004G328700--Sobic009G083000 Sobic001G460700 Sobic001G460700 Sobic004G328700--Sobic001G460700 Sobic003G239700 Sobic003G239700 Sobic004G328700--Sobic003G239700 Sobic009G254400 Sobic009G254400 Sobic001G263500--Sobic009G254400 Sobic008G163800 Sobic008G163800 Sobic001G263500--Sobic008G163800 Sobic001G263500--Sobic010G179000 Sobic006G079100 Sobic006G079100 Sobic001G263500--Sobic006G079100 Sobic010G161300 Sobic010G161300 Sobic001G263500--Sobic010G161300 Sobic003G406500 Sobic003G406500 Sobic001G263500--Sobic003G406500 Sobic008G031600 Sobic008G031600 Sobic001G263500--Sobic008G031600 Sobic006G278400 Sobic006G278400 Sobic001G263500--Sobic006G278400 Sobic001G331100 Sobic001G331100 Sobic001G263500--Sobic001G331100 Sobic003G397000 Sobic003G397000 Sobic004G016700--Sobic003G397000 Sobic002G320200 Sobic002G320200 Sobic004G016700--Sobic002G320200 Sobic004G016700--Sobic001G460700 Sobic004G016700--Sobic001G030200 Sobic006G280300 Sobic006G280300 Sobic004G016700--Sobic006G280300 Sobic003G396900 Sobic003G396900 Sobic004G016700--Sobic003G396900 Sobic004G016700--Sobic010G179000 Sobic004G066300 Sobic004G066300 Sobic004G016700--Sobic004G066300 Sobic004G297800 Sobic004G297800 Sobic004G016700--Sobic004G297800 Sobic010G208000 Sobic010G208000 Sobic001G030200--Sobic010G208000 Sobic001G030200--Sobic002G019900 Sobic001G030200--Sobic004G066300 Sobic001G516800 Sobic001G516800 Sobic001G030200--Sobic001G516800 Sobic004G353900 Sobic004G353900 Sobic001G030200--Sobic004G353900 Sobic008G131200 Sobic008G131200 Sobic001G030200--Sobic008G131200 Sobic001G030200--Sobic004G016700 Sobic004G034500 Sobic004G034500 Sobic001G030200--Sobic004G034500 Sobic004G072000 Sobic004G072000 Sobic001G030200--Sobic004G072000 Sobic002G019900--Sobic001G030200 Sobic002G285450 Sobic002G285450 Sobic002G019900--Sobic002G285450 Sobic002G019900--Sobic010G208000 Sobic002G019900--Sobic001G516800 Sobic007G139000 Sobic007G139000 Sobic002G019900--Sobic007G139000 Sobic003G111600 Sobic003G111600 Sobic002G019900--Sobic003G111600 Sobic002G019900--Sobic004G016700 Sobic002G019900--Sobic001G460700 Sobic002G406400 Sobic002G406400 Sobic002G019900--Sobic002G406400 Sobic008G035600--Sobic004G328700 Sobic001G543500 Sobic001G543500 Sobic008G035600--Sobic001G543500 Sobic005G033801 Sobic005G033801 Sobic008G035600--Sobic005G033801 Sobic001G243300 Sobic001G243300 Sobic008G035600--Sobic001G243300 Sobic005G042700 Sobic005G042700 Sobic008G035600--Sobic005G042700 Sobic010G258700 Sobic010G258700 Sobic008G035600--Sobic010G258700 Sobic003G102800 Sobic003G102800 Sobic008G035600--Sobic003G102800 Sobic008G035600--Sobic003G239700 Sobic010G254801 Sobic010G254801 Sobic008G035600--Sobic010G254801 Sobic010G179000--Sobic008G031600 Sobic010G179000--Sobic001G460700 Sobic001G148600 Sobic001G148600 Sobic010G179000--Sobic001G148600 Sobic003G201400 Sobic003G201400 Sobic010G179000--Sobic003G201400 Sobic003G081400 Sobic003G081400 Sobic010G179000--Sobic003G081400 Sobic004G128600 Sobic004G128600 Sobic010G179000--Sobic004G128600 Sobic010G045300 Sobic010G045300 Sobic010G179000--Sobic010G045300 Sobic010G208300 Sobic010G208300 Sobic010G179000--Sobic010G208300 Sobic010G029200 Sobic010G029200 Sobic010G179000--Sobic010G029200 Sobic002G004200 Sobic002G004200 Sobic009G083000--Sobic002G004200 Sobic008G152100 Sobic008G152100 Sobic009G083000--Sobic008G152100 Sobic009G083000--Sobic010G258700 Sobic004G007850 Sobic004G007850 Sobic009G083000--Sobic004G007850 Sobic005G091400 Sobic005G091400 Sobic009G083000--Sobic005G091400 Sobic005G077532 Sobic005G077532 Sobic009G083000--Sobic005G077532 Sobic001G541166 Sobic001G541166 Sobic009G083000--Sobic001G541166 Sobic009G083000--Sobic006G079100 Sobic002G247100 Sobic002G247100 Sobic009G083000--Sobic002G247100 Sobic001G460700--Sobic010G029200 Sobic001G460700--Sobic010G208300 Sobic003G283750 Sobic003G283750 Sobic001G460700--Sobic003G283750 Sobic009G039400 Sobic009G039400 Sobic001G460700--Sobic009G039400 Sobic003G142900 Sobic003G142900 Sobic001G460700--Sobic003G142900 Sobic010G068300 Sobic010G068300 Sobic001G460700--Sobic010G068300 Sobic001G460700--Sobic003G081400 Sobic006G133650 Sobic006G133650 Sobic001G460700--Sobic006G133650 Sobic001G460700--Sobic008G031600 Sobic006G166601 Sobic006G166601 Sobic003G239700--Sobic006G166601 Sobic010G200800 Sobic010G200800 Sobic003G239700--Sobic010G200800 Sobic003G008850 Sobic003G008850 Sobic003G239700--Sobic003G008850 Sobic005G076100 Sobic005G076100 Sobic003G239700--Sobic005G076100 Sobic009G152901 Sobic009G152901 Sobic003G239700--Sobic009G152901 Sobic004G354800 Sobic004G354800 Sobic003G239700--Sobic004G354800 Sobic002G326200 Sobic002G326200 Sobic003G239700--Sobic002G326200 Sobic001G120100 Sobic001G120100 Sobic003G239700--Sobic001G120100 Sobic003G136700 Sobic003G136700 Sobic003G239700--Sobic003G136700
Octagon: transcription factors


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