Gene annotation
Transcriptome id Sobic.004G016700.1
Synonym Sb04g001580
Functional annotation expressed protein
UniProt C5XSY8
Pfam -
Panther DB PTHR38357 PTHR38357:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G51080 : -
RAP-DB (Rice) LOC_Os03g04580.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK23744
Barley HORVU2Hr1G012430.2 , HORVU2Hr1G012500.2 , HORVU2Hr1G012500.1 , HORVU4Hr1G083800.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G397000 expressed protein -
2 Sobic.002G320200 cytochrome P450, putative, expressed -
3 Sobic.001G460700 expressed protein -
4 Sobic.001G030200 transcription termination factor nusG family protein, expressed -
5 Sobic.006G280300 anthranilate phosphoribosyltransferase, putative, expressed -
6 Sobic.003G396900 expressed protein -
7 Sobic.010G179000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
8 Sobic.004G066300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.004G297800 transferase family protein, putative, expressed -
10 Sobic.009G053201 - -
11 Sobic.010G068300 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
12 Sobic.002G284701 - -
13 Sobic.007G139000 ZF-HD protein dimerisation region containing protein, expressed -
14 Sobic.003G217000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.002G019900 gibberellin receptor GID1L2, putative, expressed -
16 Sobic.K044200 - -
17 Sobic.001G493800 expressed protein -
18 Sobic.008G139900 expressed protein -
19 Sobic.004G279150 - -
20 Sobic.010G029200 OsMADS75 - MADS-box family gene with M-alpha type-box, expressed -


Gene co-expression network
sample Sobic004G016700 Sobic004G016700 Sobic003G397000 Sobic003G397000 Sobic004G016700--Sobic003G397000 Sobic002G320200 Sobic002G320200 Sobic004G016700--Sobic002G320200 Sobic001G460700 Sobic001G460700 Sobic004G016700--Sobic001G460700 Sobic001G030200 Sobic001G030200 Sobic004G016700--Sobic001G030200 Sobic006G280300 Sobic006G280300 Sobic004G016700--Sobic006G280300 Sobic003G396900 Sobic003G396900 Sobic004G016700--Sobic003G396900 Sobic010G179000 Sobic010G179000 Sobic004G016700--Sobic010G179000 Sobic004G066300 Sobic004G066300 Sobic004G016700--Sobic004G066300 Sobic004G297800 Sobic004G297800 Sobic004G016700--Sobic004G297800 Sobic003G397000--Sobic002G320200 Sobic008G031600 Sobic008G031600 Sobic003G397000--Sobic008G031600 Sobic003G397000--Sobic001G460700 Sobic003G081400 Sobic003G081400 Sobic003G397000--Sobic003G081400 Sobic002G285300 Sobic002G285300 Sobic003G397000--Sobic002G285300 Sobic010G068300 Sobic010G068300 Sobic003G397000--Sobic010G068300 Sobic006G167200 Sobic006G167200 Sobic003G397000--Sobic006G167200 Sobic001G084500 Sobic001G084500 Sobic003G397000--Sobic001G084500 Sobic010G029200 Sobic010G029200 Sobic003G397000--Sobic010G029200 Sobic002G320200--Sobic003G397000 Sobic009G127600 Sobic009G127600 Sobic002G320200--Sobic009G127600 Sobic002G320200--Sobic003G081400 Sobic001G493800 Sobic001G493800 Sobic002G320200--Sobic001G493800 Sobic010G114400 Sobic010G114400 Sobic002G320200--Sobic010G114400 Sobic002G320200--Sobic008G031600 Sobic002G320200--Sobic006G167200 Sobic002G156300 Sobic002G156300 Sobic002G320200--Sobic002G156300 Sobic009G154000 Sobic009G154000 Sobic002G320200--Sobic009G154000 Sobic001G460700--Sobic010G029200 Sobic010G208300 Sobic010G208300 Sobic001G460700--Sobic010G208300 Sobic003G283750 Sobic003G283750 Sobic001G460700--Sobic003G283750 Sobic009G039400 Sobic009G039400 Sobic001G460700--Sobic009G039400 Sobic003G142900 Sobic003G142900 Sobic001G460700--Sobic003G142900 Sobic001G460700--Sobic010G068300 Sobic001G460700--Sobic003G081400 Sobic006G133650 Sobic006G133650 Sobic001G460700--Sobic006G133650 Sobic001G460700--Sobic008G031600 Sobic010G208000 Sobic010G208000 Sobic001G030200--Sobic010G208000 Sobic002G019900 Sobic002G019900 Sobic001G030200--Sobic002G019900 Sobic001G030200--Sobic004G066300 Sobic001G516800 Sobic001G516800 Sobic001G030200--Sobic001G516800 Sobic004G353900 Sobic004G353900 Sobic001G030200--Sobic004G353900 Sobic008G131200 Sobic008G131200 Sobic001G030200--Sobic008G131200 Sobic001G030200--Sobic004G016700 Sobic004G034500 Sobic004G034500 Sobic001G030200--Sobic004G034500 Sobic004G072000 Sobic004G072000 Sobic001G030200--Sobic004G072000 Sobic006G197000 Sobic006G197000 Sobic006G280300--Sobic006G197000 Sobic006G280300--Sobic001G460700 Sobic003G201400 Sobic003G201400 Sobic006G280300--Sobic003G201400 Sobic006G280300--Sobic003G396900 Sobic006G280300--Sobic008G031600 Sobic008G028500 Sobic008G028500 Sobic006G280300--Sobic008G028500 Sobic006G280300--Sobic010G114400 Sobic004G128600 Sobic004G128600 Sobic006G280300--Sobic004G128600 SobicK044200 SobicK044200 Sobic006G280300--SobicK044200 Sobic003G396900--Sobic003G201400 Sobic002G206200 Sobic002G206200 Sobic003G396900--Sobic002G206200 Sobic003G396900--Sobic002G156300 Sobic009G031100 Sobic009G031100 Sobic003G396900--Sobic009G031100 Sobic001G145300 Sobic001G145300 Sobic003G396900--Sobic001G145300 Sobic004G330400 Sobic004G330400 Sobic003G396900--Sobic004G330400 Sobic003G396900--Sobic010G114400 Sobic003G396900--Sobic003G081400 Sobic003G109400 Sobic003G109400 Sobic003G396900--Sobic003G109400 Sobic010G179000--Sobic008G031600 Sobic010G179000--Sobic001G460700 Sobic001G148600 Sobic001G148600 Sobic010G179000--Sobic001G148600 Sobic010G179000--Sobic003G201400 Sobic010G179000--Sobic003G081400 Sobic010G179000--Sobic004G128600 Sobic010G045300 Sobic010G045300 Sobic010G179000--Sobic010G045300 Sobic010G179000--Sobic010G208300 Sobic010G179000--Sobic010G029200 Sobic004G066300--Sobic001G030200 Sobic004G066300--Sobic004G353900 Sobic004G066300--Sobic008G131200 Sobic001G115800 Sobic001G115800 Sobic004G066300--Sobic001G115800 Sobic004G066300--SobicK044200 Sobic004G066300--Sobic010G208000 Sobic004G066300--Sobic004G297800 Sobic006G247500 Sobic006G247500 Sobic004G066300--Sobic006G247500 Sobic004G066300--Sobic009G154000 Sobic006G079100 Sobic006G079100 Sobic004G297800--Sobic006G079100 Sobic004G297800--Sobic008G131200 Sobic004G297800--Sobic006G247500 Sobic004G297800--SobicK044200 Sobic010G014200 Sobic010G014200 Sobic004G297800--Sobic010G014200 Sobic004G297800--Sobic004G128600 Sobic004G297800--Sobic006G280300 Sobic001G362800 Sobic001G362800 Sobic004G297800--Sobic001G362800 Sobic004G297800--Sobic001G115800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.