Gene annotation
Transcriptome id Sobic.003G397000.1
Synonym Sb03g043380
Functional annotation expressed protein
UniProt C5XFK6
Pfam PF05910
Panther DB PTHR31972 PTHR31972:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G12690 : Plant protein of unknown function (DUF868)
RAP-DB (Rice) LOC_Os01g68140.1 : expressed protein
MaizeGDB (Corn) Zm00025a026339
Brachypodium KQK11128
Barley HORVU3Hr1G092470.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G320200 cytochrome P450, putative, expressed -
2 Sobic.008G031600 expressed protein -
3 Sobic.001G460700 expressed protein -
4 Sobic.003G081400 Ser/Thr protein kinase, putative, expressed -
5 Sobic.002G285300 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsSAUR53 - Auxin-responsive SAUR gene family member, expressed -
6 Sobic.010G068300 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
7 Sobic.006G167200 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
8 Sobic.001G084500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
9 Sobic.010G029200 OsMADS75 - MADS-box family gene with M-alpha type-box, expressed -
10 Sobic.004G310700 glutaredoxin 2, putative, expressed -
11 Sobic.009G039400 jacalin-like lectin domain containing protein, expressed -
12 Sobic.008G163800 expressed protein -
13 Sobic.006G133650 - -
14 Sobic.009G154000 ATOFP18/OFP18, putative, expressed -
15 Sobic.010G208300 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
16 Sobic.004G016700 expressed protein -
17 Sobic.003G201400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
18 Sobic.009G127600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
19 Sobic.008G088863 - -
20 Sobic.002G284701 - -


Gene co-expression network
sample Sobic003G397000 Sobic003G397000 Sobic002G320200 Sobic002G320200 Sobic003G397000--Sobic002G320200 Sobic008G031600 Sobic008G031600 Sobic003G397000--Sobic008G031600 Sobic001G460700 Sobic001G460700 Sobic003G397000--Sobic001G460700 Sobic003G081400 Sobic003G081400 Sobic003G397000--Sobic003G081400 Sobic002G285300 Sobic002G285300 Sobic003G397000--Sobic002G285300 Sobic010G068300 Sobic010G068300 Sobic003G397000--Sobic010G068300 Sobic006G167200 Sobic006G167200 Sobic003G397000--Sobic006G167200 Sobic001G084500 Sobic001G084500 Sobic003G397000--Sobic001G084500 Sobic010G029200 Sobic010G029200 Sobic003G397000--Sobic010G029200 Sobic002G320200--Sobic003G397000 Sobic009G127600 Sobic009G127600 Sobic002G320200--Sobic009G127600 Sobic002G320200--Sobic003G081400 Sobic001G493800 Sobic001G493800 Sobic002G320200--Sobic001G493800 Sobic010G114400 Sobic010G114400 Sobic002G320200--Sobic010G114400 Sobic002G320200--Sobic008G031600 Sobic002G320200--Sobic006G167200 Sobic002G156300 Sobic002G156300 Sobic002G320200--Sobic002G156300 Sobic009G154000 Sobic009G154000 Sobic002G320200--Sobic009G154000 Sobic008G031600--Sobic003G081400 Sobic003G201400 Sobic003G201400 Sobic008G031600--Sobic003G201400 Sobic010G045300 Sobic010G045300 Sobic008G031600--Sobic010G045300 Sobic008G031600--Sobic010G029200 Sobic010G122533 Sobic010G122533 Sobic008G031600--Sobic010G122533 Sobic009G039400 Sobic009G039400 Sobic008G031600--Sobic009G039400 Sobic010G208300 Sobic010G208300 Sobic008G031600--Sobic010G208300 Sobic005G022600 Sobic005G022600 Sobic008G031600--Sobic005G022600 Sobic008G031600--Sobic006G167200 Sobic001G460700--Sobic010G029200 Sobic001G460700--Sobic010G208300 Sobic003G283750 Sobic003G283750 Sobic001G460700--Sobic003G283750 Sobic001G460700--Sobic009G039400 Sobic003G142900 Sobic003G142900 Sobic001G460700--Sobic003G142900 Sobic001G460700--Sobic010G068300 Sobic001G460700--Sobic003G081400 Sobic006G133650 Sobic006G133650 Sobic001G460700--Sobic006G133650 Sobic001G460700--Sobic008G031600 Sobic003G081400--Sobic009G039400 Sobic003G081400--Sobic003G201400 Sobic003G081400--Sobic006G167200 Sobic003G081400--Sobic010G045300 Sobic003G081400--Sobic010G208300 Sobic003G081400--Sobic005G022600 Sobic003G081400--Sobic010G029200 Sobic003G081400--Sobic010G068300 Sobic003G081400--Sobic008G031600 Sobic004G284400 Sobic004G284400 Sobic002G285300--Sobic004G284400 Sobic002G285300--Sobic003G397000 Sobic001G017900 Sobic001G017900 Sobic002G285300--Sobic001G017900 Sobic006G247500 Sobic006G247500 Sobic002G285300--Sobic006G247500 Sobic002G285300--Sobic009G154000 Sobic002G285300--Sobic002G320200 Sobic010G036000 Sobic010G036000 Sobic002G285300--Sobic010G036000 SobicK044200 SobicK044200 Sobic002G285300--SobicK044200 Sobic006G192400 Sobic006G192400 Sobic002G285300--Sobic006G192400 Sobic010G068300--Sobic010G029200 Sobic010G068300--Sobic010G045300 Sobic010G068300--Sobic010G208300 Sobic010G068300--Sobic009G039400 Sobic010G068300--Sobic003G081400 Sobic010G068300--Sobic005G022600 Sobic010G068300--Sobic003G142900 Sobic004G069600 Sobic004G069600 Sobic010G068300--Sobic004G069600 Sobic010G068300--Sobic006G133650 Sobic006G167200--Sobic010G122533 Sobic002G188100 Sobic002G188100 Sobic006G167200--Sobic002G188100 Sobic006G167200--Sobic009G039400 Sobic006G167200--Sobic006G133650 Sobic006G167200--Sobic003G081400 Sobic001G261440 Sobic001G261440 Sobic006G167200--Sobic001G261440 Sobic006G172651 Sobic006G172651 Sobic006G167200--Sobic006G172651 Sobic006G167200--Sobic010G045300 Sobic006G167200--Sobic009G127600 Sobic001G422800 Sobic001G422800 Sobic001G084500--Sobic001G422800 Sobic008G088863 Sobic008G088863 Sobic001G084500--Sobic008G088863 Sobic004G279150 Sobic004G279150 Sobic001G084500--Sobic004G279150 Sobic001G145300 Sobic001G145300 Sobic001G084500--Sobic001G145300 Sobic001G084500--Sobic009G127600 Sobic001G084500--Sobic006G167200 Sobic001G084500--Sobic001G261440 Sobic001G084500--Sobic010G114400 Sobic003G008850 Sobic003G008850 Sobic001G084500--Sobic003G008850 Sobic010G029200--Sobic009G039400 Sobic010G029200--Sobic010G208300 Sobic010G029200--Sobic010G068300 Sobic010G029200--Sobic010G045300 Sobic010G029200--Sobic004G069600 Sobic010G029200--Sobic006G133650 Sobic010G029200--Sobic003G142900 Sobic010G029200--Sobic002G188100 Sobic010G029200--Sobic003G081400
Octagon: transcription factors


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