Gene annotation
Transcriptome id Sobic.004G310700.1
Synonym Sb04g034300
Functional annotation glutaredoxin 2, putative, expressed
UniProt C5XSW5
Pfam PF05768
Panther DB PTHR33558 PTHR33558:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G08280 : Thioredoxin superfamily protein
RAP-DB (Rice) LOC_Os02g52900.3 : glutaredoxin 2, putative, expressed
MaizeGDB (Corn) Zm00025a022238
Brachypodium KQK01729
Barley HORVU6Hr1G080300.2 , HORVU6Hr1G080300.1 , HORVU0Hr1G001580.1 , HORVU3Hr1G099560.1 , HORVU3Hr1G013660.1 , HORVU3Hr1G013660.2 , HORVU1Hr1G091260.1
Wheat TraesCS6D02G309400 , TraesCS6B02G361200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G397000 expressed protein -
2 Sobic.001G516200 expressed protein -
3 Sobic.003G191800 helix-loop-helix DNA-binding domain containing protein, expressed -
4 Sobic.001G460700 expressed protein -
5 Sobic.007G072400 phosphoribosyl transferase, putative, expressed -
6 Sobic.010G152700 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.003G142900 chloroplast ATP synthase a chain precursor, putative, expressed K02108: ATPF0A, F-type H+-transporting ATPase subunit a
8 Sobic.005G102200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
9 Sobic.007G139000 ZF-HD protein dimerisation region containing protein, expressed -
10 Sobic.006G169400 expressed protein -
11 Sobic.003G283750 - -
12 Sobic.006G169300 - -
13 Sobic.001G137200 homeobox domain containing protein, expressed -
14 Sobic.007G183000 helix-loop-helix DNA-binding domain containing protein, expressed -
15 Sobic.003G081400 Ser/Thr protein kinase, putative, expressed -
16 Sobic.006G171000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL7 - SBP-box gene family member, expressed -
17 Sobic.002G003100 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
18 Sobic.003G173032 - -
19 Sobic.008G002100 zinc finger, C3HC4 type domain containing protein -
20 Sobic.008G023000 expressed protein -


Gene co-expression network
sample Sobic004G310700 Sobic004G310700 Sobic003G397000 Sobic003G397000 Sobic004G310700--Sobic003G397000 Sobic001G516200 Sobic001G516200 Sobic004G310700--Sobic001G516200 Sobic003G191800 Sobic003G191800 Sobic004G310700--Sobic003G191800 Sobic001G460700 Sobic001G460700 Sobic004G310700--Sobic001G460700 Sobic007G072400 Sobic007G072400 Sobic004G310700--Sobic007G072400 Sobic010G152700 Sobic010G152700 Sobic004G310700--Sobic010G152700 Sobic003G142900 Sobic003G142900 Sobic004G310700--Sobic003G142900 Sobic005G102200 Sobic005G102200 Sobic004G310700--Sobic005G102200 Sobic007G139000 Sobic007G139000 Sobic004G310700--Sobic007G139000 Sobic002G320200 Sobic002G320200 Sobic003G397000--Sobic002G320200 Sobic008G031600 Sobic008G031600 Sobic003G397000--Sobic008G031600 Sobic003G397000--Sobic001G460700 Sobic003G081400 Sobic003G081400 Sobic003G397000--Sobic003G081400 Sobic002G285300 Sobic002G285300 Sobic003G397000--Sobic002G285300 Sobic010G068300 Sobic010G068300 Sobic003G397000--Sobic010G068300 Sobic006G167200 Sobic006G167200 Sobic003G397000--Sobic006G167200 Sobic001G084500 Sobic001G084500 Sobic003G397000--Sobic001G084500 Sobic010G029200 Sobic010G029200 Sobic003G397000--Sobic010G029200 Sobic001G516200--Sobic003G191800 Sobic001G516200--Sobic005G102200 Sobic001G516200--Sobic010G152700 Sobic001G483700 Sobic001G483700 Sobic001G516200--Sobic001G483700 Sobic001G516200--Sobic007G072400 Sobic007G183000 Sobic007G183000 Sobic001G516200--Sobic007G183000 Sobic002G285525 Sobic002G285525 Sobic001G516200--Sobic002G285525 Sobic004G226300 Sobic004G226300 Sobic001G516200--Sobic004G226300 Sobic001G516200--Sobic007G139000 Sobic003G191800--Sobic005G102200 Sobic003G191800--Sobic010G152700 Sobic001G137200 Sobic001G137200 Sobic003G191800--Sobic001G137200 Sobic003G191800--Sobic007G139000 Sobic003G191800--Sobic001G483700 Sobic005G209800 Sobic005G209800 Sobic003G191800--Sobic005G209800 Sobic003G191800--Sobic007G072400 Sobic006G171000 Sobic006G171000 Sobic003G191800--Sobic006G171000 Sobic008G002100 Sobic008G002100 Sobic003G191800--Sobic008G002100 Sobic001G460700--Sobic010G029200 Sobic010G208300 Sobic010G208300 Sobic001G460700--Sobic010G208300 Sobic003G283750 Sobic003G283750 Sobic001G460700--Sobic003G283750 Sobic009G039400 Sobic009G039400 Sobic001G460700--Sobic009G039400 Sobic001G460700--Sobic003G142900 Sobic001G460700--Sobic010G068300 Sobic001G460700--Sobic003G081400 Sobic006G133650 Sobic006G133650 Sobic001G460700--Sobic006G133650 Sobic001G460700--Sobic008G031600 Sobic001G527400 Sobic001G527400 Sobic007G072400--Sobic001G527400 Sobic007G072400--Sobic006G171000 Sobic007G072400--Sobic008G002100 Sobic007G072400--Sobic005G209800 Sobic007G072400--Sobic007G183000 Sobic008G023000 Sobic008G023000 Sobic007G072400--Sobic008G023000 Sobic007G072400--Sobic004G226300 Sobic003G173032 Sobic003G173032 Sobic007G072400--Sobic003G173032 Sobic007G072400--Sobic001G137200 Sobic010G152700--Sobic001G137200 Sobic010G152700--Sobic006G171000 Sobic010G152700--Sobic008G002100 Sobic010G152700--Sobic001G527400 Sobic010G152700--Sobic005G209800 Sobic010G152700--Sobic007G183000 Sobic010G152700--Sobic008G023000 Sobic010G152700--Sobic004G226300 Sobic010G152700--Sobic002G285525 Sobic003G142900--Sobic010G029200 Sobic003G142900--Sobic008G023000 Sobic003G142900--Sobic008G002100 Sobic003G142900--Sobic001G527400 Sobic003G142900--Sobic004G226300 Sobic003G142900--Sobic007G183000 Sobic003G142900--Sobic005G209800 Sobic003G142900--Sobic003G173032 Sobic005G231800 Sobic005G231800 Sobic003G142900--Sobic005G231800 Sobic005G102200--Sobic003G191800 Sobic005G102200--Sobic010G152700 Sobic005G102200--Sobic001G137200 Sobic005G102200--Sobic001G483700 Sobic002G101800 Sobic002G101800 Sobic005G102200--Sobic002G101800 Sobic005G102200--Sobic002G285525 Sobic005G102200--Sobic001G527400 Sobic005G102200--Sobic005G209800 Sobic005G102200--Sobic008G002100 Sobic007G139000--Sobic003G191800 Sobic007G139000--Sobic005G102200 Sobic007G139000--Sobic001G137200 Sobic007G139000--Sobic010G152700 Sobic007G139000--Sobic002G101800 Sobic003G111600 Sobic003G111600 Sobic007G139000--Sobic003G111600 Sobic007G139000--Sobic001G483700 Sobic007G139000--Sobic002G285525 Sobic010G014900 Sobic010G014900 Sobic007G139000--Sobic010G014900
Octagon: transcription factors


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