Gene annotation
Transcriptome id Sobic.006G169400.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PME4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g37870.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.006G169400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G397000 expressed protein -
2 Sobic.004G310700 glutaredoxin 2, putative, expressed -
3 Sobic.002G320200 cytochrome P450, putative, expressed -
4 Sobic.003G081400 Ser/Thr protein kinase, putative, expressed -
5 Sobic.008G031600 expressed protein -
6 Sobic.001G402701 - -
7 Sobic.001G460700 expressed protein -
8 Sobic.001G531900 cyclin-like F-box, putative, expressed -
9 Sobic.003G201400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
10 Sobic.001G148600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
11 Sobic.010G045300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.001G516200 expressed protein -
13 Sobic.010G068300 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
14 Sobic.005G022600 PME/invertase inhibitor, putative, expressed -
15 Sobic.001G190000 MYB family transcription factor, putative, expressed -
16 Sobic.010G208300 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
17 Sobic.009G039400 jacalin-like lectin domain containing protein, expressed -
18 Sobic.010G029200 OsMADS75 - MADS-box family gene with M-alpha type-box, expressed -
19 Sobic.006G167200 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
20 Sobic.010G027800 Brix domain containing protein, putative, expressed K14846: ribosome production factor 1


Gene co-expression network
sample Sobic006G169400 Sobic006G169400 Sobic003G397000 Sobic003G397000 Sobic006G169400--Sobic003G397000 Sobic004G310700 Sobic004G310700 Sobic006G169400--Sobic004G310700 Sobic002G320200 Sobic002G320200 Sobic006G169400--Sobic002G320200 Sobic003G081400 Sobic003G081400 Sobic006G169400--Sobic003G081400 Sobic008G031600 Sobic008G031600 Sobic006G169400--Sobic008G031600 Sobic001G402701 Sobic001G402701 Sobic006G169400--Sobic001G402701 Sobic001G460700 Sobic001G460700 Sobic006G169400--Sobic001G460700 Sobic001G531900 Sobic001G531900 Sobic006G169400--Sobic001G531900 Sobic003G201400 Sobic003G201400 Sobic006G169400--Sobic003G201400 Sobic003G397000--Sobic002G320200 Sobic003G397000--Sobic008G031600 Sobic003G397000--Sobic001G460700 Sobic003G397000--Sobic003G081400 Sobic002G285300 Sobic002G285300 Sobic003G397000--Sobic002G285300 Sobic010G068300 Sobic010G068300 Sobic003G397000--Sobic010G068300 Sobic006G167200 Sobic006G167200 Sobic003G397000--Sobic006G167200 Sobic001G084500 Sobic001G084500 Sobic003G397000--Sobic001G084500 Sobic010G029200 Sobic010G029200 Sobic003G397000--Sobic010G029200 Sobic004G310700--Sobic003G397000 Sobic001G516200 Sobic001G516200 Sobic004G310700--Sobic001G516200 Sobic003G191800 Sobic003G191800 Sobic004G310700--Sobic003G191800 Sobic004G310700--Sobic001G460700 Sobic007G072400 Sobic007G072400 Sobic004G310700--Sobic007G072400 Sobic010G152700 Sobic010G152700 Sobic004G310700--Sobic010G152700 Sobic003G142900 Sobic003G142900 Sobic004G310700--Sobic003G142900 Sobic005G102200 Sobic005G102200 Sobic004G310700--Sobic005G102200 Sobic007G139000 Sobic007G139000 Sobic004G310700--Sobic007G139000 Sobic002G320200--Sobic003G397000 Sobic009G127600 Sobic009G127600 Sobic002G320200--Sobic009G127600 Sobic002G320200--Sobic003G081400 Sobic001G493800 Sobic001G493800 Sobic002G320200--Sobic001G493800 Sobic010G114400 Sobic010G114400 Sobic002G320200--Sobic010G114400 Sobic002G320200--Sobic008G031600 Sobic002G320200--Sobic006G167200 Sobic002G156300 Sobic002G156300 Sobic002G320200--Sobic002G156300 Sobic009G154000 Sobic009G154000 Sobic002G320200--Sobic009G154000 Sobic009G039400 Sobic009G039400 Sobic003G081400--Sobic009G039400 Sobic003G081400--Sobic003G201400 Sobic003G081400--Sobic006G167200 Sobic010G045300 Sobic010G045300 Sobic003G081400--Sobic010G045300 Sobic010G208300 Sobic010G208300 Sobic003G081400--Sobic010G208300 Sobic005G022600 Sobic005G022600 Sobic003G081400--Sobic005G022600 Sobic003G081400--Sobic010G029200 Sobic003G081400--Sobic010G068300 Sobic003G081400--Sobic008G031600 Sobic008G031600--Sobic003G081400 Sobic008G031600--Sobic003G201400 Sobic008G031600--Sobic010G045300 Sobic008G031600--Sobic010G029200 Sobic010G122533 Sobic010G122533 Sobic008G031600--Sobic010G122533 Sobic008G031600--Sobic009G039400 Sobic008G031600--Sobic010G208300 Sobic008G031600--Sobic005G022600 Sobic008G031600--Sobic006G167200 Sobic001G148600 Sobic001G148600 Sobic001G402701--Sobic001G148600 Sobic010G259200 Sobic010G259200 Sobic001G402701--Sobic010G259200 Sobic003G083700 Sobic003G083700 Sobic001G402701--Sobic003G083700 Sobic007G206700 Sobic007G206700 Sobic001G402701--Sobic007G206700 Sobic003G104900 Sobic003G104900 Sobic001G402701--Sobic003G104900 Sobic010G002850 Sobic010G002850 Sobic001G402701--Sobic010G002850 Sobic003G390300 Sobic003G390300 Sobic001G402701--Sobic003G390300 Sobic010G119600 Sobic010G119600 Sobic001G402701--Sobic010G119600 Sobic001G402701--Sobic003G142900 Sobic001G460700--Sobic010G029200 Sobic001G460700--Sobic010G208300 Sobic003G283750 Sobic003G283750 Sobic001G460700--Sobic003G283750 Sobic001G460700--Sobic009G039400 Sobic001G460700--Sobic003G142900 Sobic001G460700--Sobic010G068300 Sobic001G460700--Sobic003G081400 Sobic006G133650 Sobic006G133650 Sobic001G460700--Sobic006G133650 Sobic001G460700--Sobic008G031600 Sobic001G531900--Sobic010G045300 Sobic001G531900--Sobic006G133650 Sobic001G531900--Sobic005G022600 Sobic002G188100 Sobic002G188100 Sobic001G531900--Sobic002G188100 Sobic001G531900--Sobic009G039400 Sobic001G531900--Sobic003G081400 Sobic001G531900--Sobic006G167200 Sobic004G069600 Sobic004G069600 Sobic001G531900--Sobic004G069600 Sobic001G531900--Sobic010G029200 Sobic003G201400--Sobic010G114400 Sobic003G201400--Sobic002G156300 Sobic010G224800 Sobic010G224800 Sobic003G201400--Sobic010G224800 Sobic009G031100 Sobic009G031100 Sobic003G201400--Sobic009G031100 Sobic003G109400 Sobic003G109400 Sobic003G201400--Sobic003G109400 Sobic006G197000 Sobic006G197000 Sobic003G201400--Sobic006G197000 Sobic007G001300 Sobic007G001300 Sobic003G201400--Sobic007G001300 Sobic006G172651 Sobic006G172651 Sobic003G201400--Sobic006G172651 Sobic003G201400--Sobic003G081400
Octagon: transcription factors


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