Gene annotation
Transcriptome id Sobic.001G531900.1
Synonym Sb01g049490
Functional annotation cyclin-like F-box, putative, expressed
UniProt A0A1Z5SBT7
Pfam -
Panther DB PTHR22844 PTHR22844:SF176
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G00755 : F-box family protein
RAP-DB (Rice) LOC_Os03g02560.1 : cyclin-like F-box, putative, expressed
MaizeGDB (Corn) Zm00025a000236
Brachypodium KQK11922
Barley HORVU3Hr1G023390.2 , HORVU3Hr1G023390.1
Wheat TraesCS3D02G127000 , TraesCS3B02G145100
Populus -


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cDNA sequences
Sobic.001G531900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G045300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.006G133650 - -
3 Sobic.005G022600 PME/invertase inhibitor, putative, expressed -
4 Sobic.002G188100 - -
5 Sobic.009G039400 jacalin-like lectin domain containing protein, expressed -
6 Sobic.003G081400 Ser/Thr protein kinase, putative, expressed -
7 Sobic.006G167200 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
8 Sobic.004G069600 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.010G029200 OsMADS75 - MADS-box family gene with M-alpha type-box, expressed -
10 Sobic.010G122533 - -
11 Sobic.001G084500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
12 Sobic.010G208300 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
13 Sobic.003G201400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
14 Sobic.008G031600 expressed protein -
15 Sobic.001G261440 - -
16 Sobic.006G169400 expressed protein -
17 Sobic.010G068300 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
18 Sobic.002G231800 purine permease, putative, expressed -
19 Sobic.006G172651 - -
20 Sobic.010G040000 expressed protein -


Gene co-expression network
sample Sobic001G531900 Sobic001G531900 Sobic010G045300 Sobic010G045300 Sobic001G531900--Sobic010G045300 Sobic006G133650 Sobic006G133650 Sobic001G531900--Sobic006G133650 Sobic005G022600 Sobic005G022600 Sobic001G531900--Sobic005G022600 Sobic002G188100 Sobic002G188100 Sobic001G531900--Sobic002G188100 Sobic009G039400 Sobic009G039400 Sobic001G531900--Sobic009G039400 Sobic003G081400 Sobic003G081400 Sobic001G531900--Sobic003G081400 Sobic006G167200 Sobic006G167200 Sobic001G531900--Sobic006G167200 Sobic004G069600 Sobic004G069600 Sobic001G531900--Sobic004G069600 Sobic010G029200 Sobic010G029200 Sobic001G531900--Sobic010G029200 Sobic010G045300--Sobic010G029200 Sobic010G045300--Sobic009G039400 Sobic010G068300 Sobic010G068300 Sobic010G045300--Sobic010G068300 Sobic010G045300--Sobic002G188100 Sobic010G045300--Sobic004G069600 Sobic010G045300--Sobic005G022600 Sobic010G045300--Sobic003G081400 Sobic010G208300 Sobic010G208300 Sobic010G045300--Sobic010G208300 Sobic010G045300--Sobic006G133650 Sobic006G133650--Sobic009G039400 Sobic006G133650--Sobic002G188100 Sobic006G133650--Sobic010G029200 Sobic006G133650--Sobic006G167200 Sobic006G133650--Sobic004G069600 Sobic006G133650--Sobic010G208300 Sobic006G133650--Sobic010G045300 Sobic010G122533 Sobic010G122533 Sobic006G133650--Sobic010G122533 Sobic003G142900 Sobic003G142900 Sobic006G133650--Sobic003G142900 Sobic005G022600--Sobic010G045300 Sobic005G022600--Sobic003G081400 Sobic005G022600--Sobic010G068300 Sobic005G022600--Sobic009G039400 Sobic005G022600--Sobic010G029200 Sobic005G022600--Sobic010G208300 Sobic005G022600--Sobic002G188100 Sobic003G201400 Sobic003G201400 Sobic005G022600--Sobic003G201400 Sobic005G022600--Sobic006G167200 Sobic002G188100--Sobic006G133650 Sobic002G188100--Sobic010G045300 Sobic002G188100--Sobic006G167200 Sobic002G188100--Sobic009G039400 Sobic010G040000 Sobic010G040000 Sobic002G188100--Sobic010G040000 Sobic002G188100--Sobic010G029200 Sobic002G188100--Sobic004G069600 Sobic002G188100--Sobic010G122533 Sobic002G188100--Sobic003G081400 Sobic009G039400--Sobic010G208300 Sobic009G039400--Sobic010G029200 Sobic009G039400--Sobic006G133650 Sobic009G039400--Sobic010G045300 Sobic009G039400--Sobic003G081400 Sobic009G039400--Sobic004G069600 Sobic009G039400--Sobic002G188100 Sobic009G039400--Sobic006G167200 Sobic009G039400--Sobic010G068300 Sobic003G081400--Sobic009G039400 Sobic003G081400--Sobic003G201400 Sobic003G081400--Sobic006G167200 Sobic003G081400--Sobic010G045300 Sobic003G081400--Sobic010G208300 Sobic003G081400--Sobic005G022600 Sobic003G081400--Sobic010G029200 Sobic003G081400--Sobic010G068300 Sobic008G031600 Sobic008G031600 Sobic003G081400--Sobic008G031600 Sobic006G167200--Sobic010G122533 Sobic006G167200--Sobic002G188100 Sobic006G167200--Sobic009G039400 Sobic006G167200--Sobic006G133650 Sobic006G167200--Sobic003G081400 Sobic001G261440 Sobic001G261440 Sobic006G167200--Sobic001G261440 Sobic006G172651 Sobic006G172651 Sobic006G167200--Sobic006G172651 Sobic006G167200--Sobic010G045300 Sobic009G127600 Sobic009G127600 Sobic006G167200--Sobic009G127600 Sobic004G069600--Sobic010G029200 Sobic004G069600--Sobic009G039400 Sobic004G069600--Sobic006G133650 Sobic004G069600--Sobic010G045300 Sobic004G069600--Sobic002G188100 Sobic004G069600--Sobic010G208300 Sobic004G069600--Sobic003G142900 Sobic004G069600--Sobic010G068300 Sobic004G069600--Sobic006G167200 Sobic010G029200--Sobic009G039400 Sobic010G029200--Sobic010G208300 Sobic010G029200--Sobic010G068300 Sobic010G029200--Sobic010G045300 Sobic010G029200--Sobic004G069600 Sobic010G029200--Sobic006G133650 Sobic010G029200--Sobic003G142900 Sobic010G029200--Sobic002G188100 Sobic010G029200--Sobic003G081400
Octagon: transcription factors


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