Gene annotation
Transcriptome id Sobic.001G190000.1
Synonym TRFL5
Functional annotation MYB family transcription factor, putative, expressed
UniProt A0A1Z5S6C8
Pfam PF00249
Panther DB PTHR21717 PTHR21717:SF32
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G15720 : TRF-like 5
RAP-DB (Rice) LOC_Os07g49530.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a017401 , Zm00025a017400
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G190000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G157300 expressed protein -
2 Sobic.010G122533 - -
3 Sobic.002G188100 - -
4 Sobic.006G133650 - -
5 Sobic.003G119266 - -
6 Sobic.006G167200 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
7 Sobic.008G031600 expressed protein -
8 Sobic.004G069600 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.009G039400 jacalin-like lectin domain containing protein, expressed -
10 Sobic.003G178400 - -
11 Sobic.010G045300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.001G261440 - -
13 Sobic.001G103400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -
14 Sobic.010G029200 OsMADS75 - MADS-box family gene with M-alpha type-box, expressed -
15 Sobic.006G172651 - -
16 Sobic.003G081400 Ser/Thr protein kinase, putative, expressed -
17 Sobic.003G142900 chloroplast ATP synthase a chain precursor, putative, expressed K02108: ATPF0A, F-type H+-transporting ATPase subunit a
18 Sobic.003G397000 expressed protein -
19 Sobic.005G022600 PME/invertase inhibitor, putative, expressed -
20 Sobic.001G000900 expressed protein -


Gene co-expression network
sample Sobic001G190000 Sobic001G190000 Sobic006G157300 Sobic006G157300 Sobic001G190000--Sobic006G157300 Sobic010G122533 Sobic010G122533 Sobic001G190000--Sobic010G122533 Sobic002G188100 Sobic002G188100 Sobic001G190000--Sobic002G188100 Sobic006G133650 Sobic006G133650 Sobic001G190000--Sobic006G133650 Sobic003G119266 Sobic003G119266 Sobic001G190000--Sobic003G119266 Sobic006G167200 Sobic006G167200 Sobic001G190000--Sobic006G167200 Sobic008G031600 Sobic008G031600 Sobic001G190000--Sobic008G031600 Sobic004G069600 Sobic004G069600 Sobic001G190000--Sobic004G069600 Sobic009G039400 Sobic009G039400 Sobic001G190000--Sobic009G039400 Sobic006G157300--Sobic001G190000 SobicK044200 SobicK044200 Sobic006G157300--SobicK044200 Sobic002G206200 Sobic002G206200 Sobic006G157300--Sobic002G206200 Sobic009G154000 Sobic009G154000 Sobic006G157300--Sobic009G154000 Sobic010G224800 Sobic010G224800 Sobic006G157300--Sobic010G224800 Sobic003G109400 Sobic003G109400 Sobic006G157300--Sobic003G109400 Sobic006G172651 Sobic006G172651 Sobic006G157300--Sobic006G172651 Sobic001G261440 Sobic001G261440 Sobic006G157300--Sobic001G261440 Sobic010G114400 Sobic010G114400 Sobic006G157300--Sobic010G114400 Sobic010G122533--Sobic006G167200 Sobic010G122533--Sobic001G261440 Sobic010G122533--Sobic006G172651 Sobic010G122533--Sobic006G133650 Sobic010G122533--Sobic002G188100 Sobic003G081400 Sobic003G081400 Sobic010G122533--Sobic003G081400 Sobic010G122533--Sobic009G039400 Sobic010G045300 Sobic010G045300 Sobic010G122533--Sobic010G045300 Sobic010G122533--Sobic003G119266 Sobic002G188100--Sobic006G133650 Sobic002G188100--Sobic010G045300 Sobic002G188100--Sobic006G167200 Sobic002G188100--Sobic009G039400 Sobic010G040000 Sobic010G040000 Sobic002G188100--Sobic010G040000 Sobic010G029200 Sobic010G029200 Sobic002G188100--Sobic010G029200 Sobic002G188100--Sobic004G069600 Sobic002G188100--Sobic010G122533 Sobic002G188100--Sobic003G081400 Sobic006G133650--Sobic009G039400 Sobic006G133650--Sobic002G188100 Sobic006G133650--Sobic010G029200 Sobic006G133650--Sobic006G167200 Sobic006G133650--Sobic004G069600 Sobic010G208300 Sobic010G208300 Sobic006G133650--Sobic010G208300 Sobic006G133650--Sobic010G045300 Sobic006G133650--Sobic010G122533 Sobic003G142900 Sobic003G142900 Sobic006G133650--Sobic003G142900 Sobic002G284701 Sobic002G284701 Sobic003G119266--Sobic002G284701 Sobic003G119266--Sobic010G122533 Sobic003G119266--Sobic006G167200 Sobic003G119266--Sobic002G188100 Sobic003G178400 Sobic003G178400 Sobic003G119266--Sobic003G178400 Sobic003G119266--Sobic006G133650 Sobic003G119266--Sobic001G261440 Sobic001G145300 Sobic001G145300 Sobic003G119266--Sobic001G145300 Sobic003G119266--Sobic004G069600 Sobic006G167200--Sobic010G122533 Sobic006G167200--Sobic002G188100 Sobic006G167200--Sobic009G039400 Sobic006G167200--Sobic006G133650 Sobic006G167200--Sobic003G081400 Sobic006G167200--Sobic001G261440 Sobic006G167200--Sobic006G172651 Sobic006G167200--Sobic010G045300 Sobic009G127600 Sobic009G127600 Sobic006G167200--Sobic009G127600 Sobic008G031600--Sobic003G081400 Sobic003G201400 Sobic003G201400 Sobic008G031600--Sobic003G201400 Sobic008G031600--Sobic010G045300 Sobic008G031600--Sobic010G029200 Sobic008G031600--Sobic010G122533 Sobic008G031600--Sobic009G039400 Sobic008G031600--Sobic010G208300 Sobic005G022600 Sobic005G022600 Sobic008G031600--Sobic005G022600 Sobic008G031600--Sobic006G167200 Sobic004G069600--Sobic010G029200 Sobic004G069600--Sobic009G039400 Sobic004G069600--Sobic006G133650 Sobic004G069600--Sobic010G045300 Sobic004G069600--Sobic002G188100 Sobic004G069600--Sobic010G208300 Sobic004G069600--Sobic003G142900 Sobic010G068300 Sobic010G068300 Sobic004G069600--Sobic010G068300 Sobic004G069600--Sobic006G167200 Sobic009G039400--Sobic010G208300 Sobic009G039400--Sobic010G029200 Sobic009G039400--Sobic006G133650 Sobic009G039400--Sobic010G045300 Sobic009G039400--Sobic003G081400 Sobic009G039400--Sobic004G069600 Sobic009G039400--Sobic002G188100 Sobic009G039400--Sobic006G167200 Sobic009G039400--Sobic010G068300
Octagon: transcription factors


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