Gene annotation
Transcriptome id Sobic.003G396900.3,Sobic.003G396900.2
Synonym Sb03g043370
Functional annotation expressed protein
UniProt A0A1W0W127 , A0A1W0W120
Pfam -
Panther DB PTHR12112
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g68130.1 : expressed protein
MaizeGDB (Corn) Zm00025a051627 , Zm00025a026340
Brachypodium -
Barley -
Wheat TraesCS3A02G415800 , TraesCS3B02G451000
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G201400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
2 Sobic.002G206200 monogalactosyldiacylglycerol synthase, putative, expressed K03715: 1,2-diacylglycerol 3-beta-galactosyltransferase
3 Sobic.002G156300 - -
4 Sobic.009G031100 cycloeucalenol cycloisomerase, putative, expressed K08246: cycloeucalenol cycloisomerase
5 Sobic.001G145300 - -
6 Sobic.004G330400 expressed protein -
7 Sobic.010G114400 expressed protein -
8 Sobic.003G081400 Ser/Thr protein kinase, putative, expressed -
9 Sobic.003G109400 - -
10 Sobic.006G172651 - -
11 Sobic.001G493800 expressed protein -
12 Sobic.010G224800 patellin-5, putative, expressed -
13 Sobic.001G261440 - -
14 Sobic.007G001300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
15 Sobic.008G088863 - -
16 Sobic.009G127600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
17 Sobic.005G022600 PME/invertase inhibitor, putative, expressed -
18 Sobic.010G045300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.010G114500 tetraspanin family protein, putative, expressed -
20 Sobic.008G020300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant


Gene co-expression network
sample Sobic003G396900 Sobic003G396900 Sobic003G201400 Sobic003G201400 Sobic003G396900--Sobic003G201400 Sobic002G206200 Sobic002G206200 Sobic003G396900--Sobic002G206200 Sobic002G156300 Sobic002G156300 Sobic003G396900--Sobic002G156300 Sobic009G031100 Sobic009G031100 Sobic003G396900--Sobic009G031100 Sobic001G145300 Sobic001G145300 Sobic003G396900--Sobic001G145300 Sobic004G330400 Sobic004G330400 Sobic003G396900--Sobic004G330400 Sobic010G114400 Sobic010G114400 Sobic003G396900--Sobic010G114400 Sobic003G081400 Sobic003G081400 Sobic003G396900--Sobic003G081400 Sobic003G109400 Sobic003G109400 Sobic003G396900--Sobic003G109400 Sobic003G201400--Sobic010G114400 Sobic003G201400--Sobic002G156300 Sobic010G224800 Sobic010G224800 Sobic003G201400--Sobic010G224800 Sobic003G201400--Sobic009G031100 Sobic003G201400--Sobic003G109400 Sobic006G197000 Sobic006G197000 Sobic003G201400--Sobic006G197000 Sobic007G001300 Sobic007G001300 Sobic003G201400--Sobic007G001300 Sobic006G172651 Sobic006G172651 Sobic003G201400--Sobic006G172651 Sobic003G201400--Sobic003G081400 Sobic002G206200--Sobic003G109400 Sobic002G206200--Sobic002G156300 Sobic002G206200--Sobic006G172651 Sobic002G206200--Sobic010G224800 Sobic002G206200--Sobic009G031100 Sobic009G163500 Sobic009G163500 Sobic002G206200--Sobic009G163500 Sobic002G206200--Sobic007G001300 Sobic002G206200--Sobic010G114400 Sobic001G261440 Sobic001G261440 Sobic002G206200--Sobic001G261440 Sobic002G156300--Sobic007G001300 Sobic002G156300--Sobic003G109400 Sobic002G156300--Sobic010G114400 Sobic002G156300--Sobic010G224800 Sobic002G156300--Sobic009G031100 Sobic003G105300 Sobic003G105300 Sobic002G156300--Sobic003G105300 Sobic004G197300 Sobic004G197300 Sobic002G156300--Sobic004G197300 Sobic008G020300 Sobic008G020300 Sobic002G156300--Sobic008G020300 Sobic002G156300--Sobic009G163500 Sobic009G031100--Sobic002G156300 Sobic009G031100--Sobic007G001300 Sobic009G031100--Sobic010G224800 Sobic009G031100--Sobic010G114400 Sobic009G031100--Sobic003G109400 Sobic010G114500 Sobic010G114500 Sobic009G031100--Sobic010G114500 Sobic009G031100--Sobic003G105300 Sobic009G031100--Sobic002G206200 Sobic009G031100--Sobic004G197300 Sobic001G145300--Sobic006G172651 Sobic001G145300--Sobic001G261440 Sobic001G145300--Sobic002G156300 Sobic009G127600 Sobic009G127600 Sobic001G145300--Sobic009G127600 Sobic001G145300--Sobic008G020300 Sobic001G145300--Sobic003G109400 Sobic001G145300--Sobic010G114400 Sobic001G145300--Sobic007G001300 Sobic003G136700 Sobic003G136700 Sobic001G145300--Sobic003G136700 Sobic002G284800 Sobic002G284800 Sobic004G330400--Sobic002G284800 Sobic001G255700 Sobic001G255700 Sobic004G330400--Sobic001G255700 Sobic004G330400--Sobic003G105300 Sobic003G368150 Sobic003G368150 Sobic004G330400--Sobic003G368150 Sobic008G133100 Sobic008G133100 Sobic004G330400--Sobic008G133100 Sobic002G425900 Sobic002G425900 Sobic004G330400--Sobic002G425900 Sobic004G330400--Sobic010G224800 Sobic004G330400--Sobic003G109400 Sobic004G330400--Sobic009G163500 Sobic010G114400--Sobic010G224800 Sobic010G114400--Sobic002G156300 Sobic010G114400--Sobic007G001300 Sobic010G114400--Sobic003G109400 Sobic010G114400--Sobic009G031100 Sobic010G114400--Sobic002G425900 Sobic010G114400--Sobic004G197300 Sobic010G114400--Sobic009G163500 Sobic010G114400--Sobic003G105300 Sobic009G039400 Sobic009G039400 Sobic003G081400--Sobic009G039400 Sobic003G081400--Sobic003G201400 Sobic006G167200 Sobic006G167200 Sobic003G081400--Sobic006G167200 Sobic010G045300 Sobic010G045300 Sobic003G081400--Sobic010G045300 Sobic010G208300 Sobic010G208300 Sobic003G081400--Sobic010G208300 Sobic005G022600 Sobic005G022600 Sobic003G081400--Sobic005G022600 Sobic010G029200 Sobic010G029200 Sobic003G081400--Sobic010G029200 Sobic010G068300 Sobic010G068300 Sobic003G081400--Sobic010G068300 Sobic008G031600 Sobic008G031600 Sobic003G081400--Sobic008G031600 Sobic003G109400--Sobic002G156300 Sobic003G109400--Sobic010G224800 Sobic003G109400--Sobic007G001300 Sobic003G109400--Sobic010G114400 Sobic003G109400--Sobic009G163500 Sobic003G109400--Sobic009G031100 Sobic003G109400--Sobic008G020300 Sobic003G109400--Sobic002G206200 Sobic003G109400--Sobic004G197300
Octagon: transcription factors


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