Gene annotation
Transcriptome id Sobic.003G217000.1
Synonym Sb03g027590
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1B6Q4L7
Pfam -
Panther DB PTHR34397 PTHR34397:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g18060.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G279150 - -
2 Sobic.003G101600 - -
3 Sobic.001G145300 - -
4 Sobic.002G284701 - -
5 Sobic.009G127600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
6 Sobic.003G313700 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
7 Sobic.006G257500 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
8 Sobic.001G422800 aspartic proteinase nepenthesin precursor, putative, expressed -
9 Sobic.006G094400 - -
10 Sobic.004G188701 - -
11 Sobic.003G008850 - -
12 Sobic.008G088863 - -
13 Sobic.008G164525 - -
14 Sobic.001G434450 - K13101: G patch domain and KOW motifs-containing protein
15 Sobic.002G165401 - -
16 Sobic.009G094000 - -
17 Sobic.008G020300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.001G493800 expressed protein -
19 Sobic.004G236500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
20 Sobic.004G160950 - -


Gene co-expression network
sample Sobic003G217000 Sobic003G217000 Sobic004G279150 Sobic004G279150 Sobic003G217000--Sobic004G279150 Sobic003G101600 Sobic003G101600 Sobic003G217000--Sobic003G101600 Sobic001G145300 Sobic001G145300 Sobic003G217000--Sobic001G145300 Sobic002G284701 Sobic002G284701 Sobic003G217000--Sobic002G284701 Sobic009G127600 Sobic009G127600 Sobic003G217000--Sobic009G127600 Sobic003G313700 Sobic003G313700 Sobic003G217000--Sobic003G313700 Sobic006G257500 Sobic006G257500 Sobic003G217000--Sobic006G257500 Sobic001G422800 Sobic001G422800 Sobic003G217000--Sobic001G422800 Sobic006G094400 Sobic006G094400 Sobic003G217000--Sobic006G094400 Sobic004G279150--Sobic009G127600 Sobic004G279150--Sobic001G145300 Sobic004G279150--Sobic001G422800 Sobic009G094000 Sobic009G094000 Sobic004G279150--Sobic009G094000 Sobic006G167200 Sobic006G167200 Sobic004G279150--Sobic006G167200 Sobic004G279150--Sobic002G284701 Sobic006G019901 Sobic006G019901 Sobic004G279150--Sobic006G019901 Sobic008G088863 Sobic008G088863 Sobic004G279150--Sobic008G088863 Sobic002G165401 Sobic002G165401 Sobic004G279150--Sobic002G165401 Sobic004G314750 Sobic004G314750 Sobic003G101600--Sobic004G314750 Sobic008G164525 Sobic008G164525 Sobic003G101600--Sobic008G164525 Sobic003G101600--Sobic006G094400 Sobic001G434450 Sobic001G434450 Sobic003G101600--Sobic001G434450 Sobic003G101600--Sobic009G094000 Sobic004G001900 Sobic004G001900 Sobic003G101600--Sobic004G001900 Sobic002G133600 Sobic002G133600 Sobic003G101600--Sobic002G133600 Sobic002G114600 Sobic002G114600 Sobic003G101600--Sobic002G114600 Sobic003G101600--Sobic002G165401 Sobic006G172651 Sobic006G172651 Sobic001G145300--Sobic006G172651 Sobic001G261440 Sobic001G261440 Sobic001G145300--Sobic001G261440 Sobic002G156300 Sobic002G156300 Sobic001G145300--Sobic002G156300 Sobic001G145300--Sobic009G127600 Sobic008G020300 Sobic008G020300 Sobic001G145300--Sobic008G020300 Sobic003G109400 Sobic003G109400 Sobic001G145300--Sobic003G109400 Sobic010G114400 Sobic010G114400 Sobic001G145300--Sobic010G114400 Sobic007G001300 Sobic007G001300 Sobic001G145300--Sobic007G001300 Sobic003G136700 Sobic003G136700 Sobic001G145300--Sobic003G136700 Sobic002G284701--Sobic001G145300 Sobic003G119266 Sobic003G119266 Sobic002G284701--Sobic003G119266 Sobic002G284701--Sobic004G279150 Sobic004G160950 Sobic004G160950 Sobic002G284701--Sobic004G160950 Sobic003G279600 Sobic003G279600 Sobic002G284701--Sobic003G279600 Sobic009G053201 Sobic009G053201 Sobic002G284701--Sobic009G053201 Sobic010G132300 Sobic010G132300 Sobic002G284701--Sobic010G132300 Sobic010G045300 Sobic010G045300 Sobic002G284701--Sobic010G045300 Sobic002G188100 Sobic002G188100 Sobic002G284701--Sobic002G188100 Sobic009G127600--Sobic001G145300 Sobic009G127600--Sobic002G156300 Sobic009G127600--Sobic004G279150 Sobic001G481201 Sobic001G481201 Sobic009G127600--Sobic001G481201 Sobic009G127600--Sobic010G114400 Sobic003G008850 Sobic003G008850 Sobic009G127600--Sobic003G008850 Sobic009G127600--Sobic006G019901 Sobic009G127600--Sobic007G001300 Sobic009G127600--Sobic003G109400 Sobic003G313700--Sobic004G314750 Sobic002G326200 Sobic002G326200 Sobic003G313700--Sobic002G326200 Sobic003G313700--Sobic001G434450 Sobic003G313700--Sobic008G164525 Sobic001G212701 Sobic001G212701 Sobic003G313700--Sobic001G212701 Sobic003G313700--Sobic003G101600 Sobic006G110600 Sobic006G110600 Sobic003G313700--Sobic006G110600 Sobic003G313700--Sobic003G008850 Sobic003G313700--Sobic002G114600 Sobic006G058300 Sobic006G058300 Sobic006G257500--Sobic006G058300 Sobic004G188701 Sobic004G188701 Sobic006G257500--Sobic004G188701 Sobic006G257500--Sobic008G020300 Sobic003G038300 Sobic003G038300 Sobic006G257500--Sobic003G038300 Sobic002G158600 Sobic002G158600 Sobic006G257500--Sobic002G158600 Sobic007G116600 Sobic007G116600 Sobic006G257500--Sobic007G116600 Sobic010G201000 Sobic010G201000 Sobic006G257500--Sobic010G201000 Sobic001G407000 Sobic001G407000 Sobic006G257500--Sobic001G407000 Sobic004G152501 Sobic004G152501 Sobic006G257500--Sobic004G152501 Sobic001G422800--Sobic008G088863 Sobic001G084500 Sobic001G084500 Sobic001G422800--Sobic001G084500 Sobic001G422800--Sobic001G145300 Sobic001G422800--Sobic004G279150 Sobic001G422800--Sobic009G127600 Sobic001G422800--Sobic001G261440 Sobic001G422800--Sobic006G172651 Sobic001G422800--Sobic006G167200 Sobic001G422800--Sobic002G188100 Sobic006G256801 Sobic006G256801 Sobic006G094400--Sobic006G256801 Sobic006G094400--Sobic001G434450 Sobic006G094400--Sobic008G164525 Sobic006G094400--Sobic004G314750 Sobic006G180500 Sobic006G180500 Sobic006G094400--Sobic006G180500 Sobic006G094400--Sobic004G001900 Sobic006G094400--Sobic009G094000 Sobic006G094400--Sobic002G165401 Sobic006G094400--Sobic003G008850
Octagon: transcription factors


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