Gene annotation
Transcriptome id Sobic.010G208000.1
Synonym Sb10g025480
Functional annotation ribosomal protein L35, putative, expressed
UniProt C5Z6S1
Pfam PF01632
Panther DB PTHR33343
NCBI CDD -
KEGG Orthology K02916; RP-L35, MRPL35, large subunit ribosomal protein L35
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT2G24090 : Ribosomal protein L35
RAP-DB (Rice) LOC_Os06g43900.1 : ribosomal protein L35, putative, expressed
MaizeGDB (Corn) Zm00025a051351
Brachypodium KQK16819
Barley HORVU7Hr1G114170.3 , HORVU7Hr1G114170.2 , HORVU7Hr1G114170.1
Wheat TraesCS7B02G421100 , TraesCSU02G093800 , TraesCS7D02G499800
Populus -


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cDNA sequences
Sobic.010G208000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G030200 transcription termination factor nusG family protein, expressed -
2 Sobic.001G516800 signal recognition particle 43 kDa protein, chloroplast precursor, putative, expressed K12271: SRP43, signal recognition particle 43 kDa protein
3 Sobic.004G072000 ribosome, putative, expressed -
4 Sobic.004G034500 ribosomal protein L3, putative, expressed K02906: RP-L3, MRPL3, large subunit ribosomal protein L3
5 Sobic.002G019900 gibberellin receptor GID1L2, putative, expressed -
6 Sobic.008G131200 DUF538 domain containing protein, putative, expressed -
7 Sobic.009G179800 - -
8 Sobic.004G204500 expressed protein -
9 Sobic.004G066300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.003G246600 plastid-specific 50S ribosomal protein 6, chloroplast precursor, putative, expressed K19035: 50S ribosomal protein 6
11 Sobic.004G353900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase/ transition metal ion binding protein, putative, expressed -
12 Sobic.001G543500 "generic sugar transporter, up-regulated under drought stress "(PubMedID : 24655390)@Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@transporter family protein, putative, expressed -
13 Sobic.008G139900 expressed protein -
14 Sobic.006G118000 expressed protein -
15 Sobic.001G094200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium homeostasis regulator CHoR1, putative, expressed -
16 Sobic.010G072900 peroxiredoxin, putative, expressed K03564: BCP, PRXQ, thioredoxin-dependent peroxiredoxin
17 Sobic.001G147400 Ferredoxin(PubMedID : 26186930)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
18 Sobic.002G406400 PPR repeat domain containing protein, putative, expressed -
19 Sobic.005G128100 acyl carrier protein, putative, expressed -
20 Sobic.002G285450 - -


Gene co-expression network
sample Sobic010G208000 Sobic010G208000 Sobic001G030200 Sobic001G030200 Sobic010G208000--Sobic001G030200 Sobic001G516800 Sobic001G516800 Sobic010G208000--Sobic001G516800 Sobic004G072000 Sobic004G072000 Sobic010G208000--Sobic004G072000 Sobic004G034500 Sobic004G034500 Sobic010G208000--Sobic004G034500 Sobic002G019900 Sobic002G019900 Sobic010G208000--Sobic002G019900 Sobic008G131200 Sobic008G131200 Sobic010G208000--Sobic008G131200 Sobic009G179800 Sobic009G179800 Sobic010G208000--Sobic009G179800 Sobic004G204500 Sobic004G204500 Sobic010G208000--Sobic004G204500 Sobic004G066300 Sobic004G066300 Sobic010G208000--Sobic004G066300 Sobic001G030200--Sobic010G208000 Sobic001G030200--Sobic002G019900 Sobic001G030200--Sobic004G066300 Sobic001G030200--Sobic001G516800 Sobic004G353900 Sobic004G353900 Sobic001G030200--Sobic004G353900 Sobic001G030200--Sobic008G131200 Sobic004G016700 Sobic004G016700 Sobic001G030200--Sobic004G016700 Sobic001G030200--Sobic004G034500 Sobic001G030200--Sobic004G072000 Sobic001G516800--Sobic010G208000 Sobic002G283800 Sobic002G283800 Sobic001G516800--Sobic002G283800 Sobic001G516800--Sobic001G030200 Sobic001G147400 Sobic001G147400 Sobic001G516800--Sobic001G147400 Sobic001G516800--Sobic004G034500 Sobic002G088200 Sobic002G088200 Sobic001G516800--Sobic002G088200 Sobic001G516800--Sobic002G019900 Sobic001G543500 Sobic001G543500 Sobic001G516800--Sobic001G543500 Sobic001G516800--Sobic009G179800 Sobic004G072000--Sobic010G208000 Sobic004G072000--Sobic004G034500 Sobic010G244600 Sobic010G244600 Sobic004G072000--Sobic010G244600 Sobic008G139900 Sobic008G139900 Sobic004G072000--Sobic008G139900 Sobic007G204400 Sobic007G204400 Sobic004G072000--Sobic007G204400 Sobic001G115800 Sobic001G115800 Sobic004G072000--Sobic001G115800 Sobic004G072000--Sobic008G131200 Sobic006G204000 Sobic006G204000 Sobic004G072000--Sobic006G204000 Sobic010G258700 Sobic010G258700 Sobic004G072000--Sobic010G258700 Sobic004G034500--Sobic004G072000 Sobic004G034500--Sobic010G208000 Sobic004G034500--Sobic001G516800 Sobic004G034500--Sobic001G030200 Sobic003G246600 Sobic003G246600 Sobic004G034500--Sobic003G246600 Sobic004G034500--Sobic004G066300 Sobic004G033900 Sobic004G033900 Sobic004G034500--Sobic004G033900 Sobic004G034500--Sobic008G131200 Sobic004G034500--Sobic001G543500 Sobic002G019900--Sobic001G030200 Sobic002G285450 Sobic002G285450 Sobic002G019900--Sobic002G285450 Sobic002G019900--Sobic010G208000 Sobic002G019900--Sobic001G516800 Sobic007G139000 Sobic007G139000 Sobic002G019900--Sobic007G139000 Sobic003G111600 Sobic003G111600 Sobic002G019900--Sobic003G111600 Sobic002G019900--Sobic004G016700 Sobic001G460700 Sobic001G460700 Sobic002G019900--Sobic001G460700 Sobic002G406400 Sobic002G406400 Sobic002G019900--Sobic002G406400 Sobic008G131200--Sobic001G115800 Sobic004G297800 Sobic004G297800 Sobic008G131200--Sobic004G297800 Sobic008G131200--Sobic008G139900 Sobic008G131200--Sobic004G072000 Sobic008G131200--Sobic010G258700 Sobic006G247500 Sobic006G247500 Sobic008G131200--Sobic006G247500 Sobic008G131200--Sobic004G066300 Sobic006G079100 Sobic006G079100 Sobic008G131200--Sobic006G079100 Sobic003G013100 Sobic003G013100 Sobic008G131200--Sobic003G013100 Sobic009G130700 Sobic009G130700 Sobic009G179800--Sobic009G130700 Sobic003G393800 Sobic003G393800 Sobic009G179800--Sobic003G393800 Sobic003G246400 Sobic003G246400 Sobic009G179800--Sobic003G246400 Sobic009G179800--Sobic003G246600 Sobic010G072900 Sobic010G072900 Sobic009G179800--Sobic010G072900 Sobic001G411300 Sobic001G411300 Sobic009G179800--Sobic001G411300 Sobic001G382100 Sobic001G382100 Sobic009G179800--Sobic001G382100 Sobic005G128100 Sobic005G128100 Sobic009G179800--Sobic005G128100 Sobic003G239300 Sobic003G239300 Sobic009G179800--Sobic003G239300 Sobic001G381900 Sobic001G381900 Sobic004G204500--Sobic001G381900 Sobic004G023400 Sobic004G023400 Sobic004G204500--Sobic004G023400 Sobic004G204500--Sobic010G208000 Sobic003G264700 Sobic003G264700 Sobic004G204500--Sobic003G264700 Sobic003G211500 Sobic003G211500 Sobic004G204500--Sobic003G211500 Sobic009G237800 Sobic009G237800 Sobic004G204500--Sobic009G237800 Sobic003G132300 Sobic003G132300 Sobic004G204500--Sobic003G132300 Sobic006G229300 Sobic006G229300 Sobic004G204500--Sobic006G229300 Sobic004G204500--Sobic005G128100 Sobic004G066300--Sobic001G030200 Sobic004G066300--Sobic004G353900 Sobic004G066300--Sobic008G131200 Sobic004G066300--Sobic001G115800 SobicK044200 SobicK044200 Sobic004G066300--SobicK044200 Sobic004G066300--Sobic010G208000 Sobic004G066300--Sobic004G297800 Sobic004G066300--Sobic006G247500 Sobic009G154000 Sobic009G154000 Sobic004G066300--Sobic009G154000
Octagon: transcription factors


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