Gene annotation
Transcriptome id Sobic.006G118000.1
Synonym Sb06g019910
Functional annotation expressed protein
UniProt C5YAE4
Pfam -
Panther DB PTHR38364
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33855 : -
RAP-DB (Rice) LOC_Os04g39950.1 : expressed protein
MaizeGDB (Corn) Zm00025a011020
Brachypodium KQJ83136
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G139900 expressed protein -
2 Sobic.002G186600 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed -
3 Sobic.004G072000 ribosome, putative, expressed -
4 Sobic.010G108500 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
5 Sobic.008G131200 DUF538 domain containing protein, putative, expressed -
6 Sobic.010G208000 ribosomal protein L35, putative, expressed K02916: RP-L35, MRPL35, large subunit ribosomal protein L35
7 Sobic.001G516800 signal recognition particle 43 kDa protein, chloroplast precursor, putative, expressed K12271: SRP43, signal recognition particle 43 kDa protein
8 Sobic.K044200 - -
9 Sobic.001G115800 expressed protein -
10 Sobic.002G088200 expressed protein -
11 Sobic.004G034500 ribosomal protein L3, putative, expressed K02906: RP-L3, MRPL3, large subunit ribosomal protein L3
12 Sobic.006G204000 "Ascorbate peroxidase,heme binding / peroxidase (Os)"(PubMedID : 27208977)@Ascorbate peroxidasel heme binding / peroxidase (Os)(PubMedID : 27208977)@peroxidase precursor, putative, expressed K00434: L-ascorbate peroxidase
13 Sobic.004G330400 expressed protein -
14 Sobic.002G285300 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsSAUR53 - Auxin-responsive SAUR gene family member, expressed -
15 Sobic.004G016700 expressed protein -
16 Sobic.001G543500 "generic sugar transporter, up-regulated under drought stress "(PubMedID : 24655390)@Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@transporter family protein, putative, expressed -
17 Sobic.003G229150 - -
18 Sobic.005G042700 DUF623 domain containing protein, expressed -
19 Sobic.004G066300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.009G154000 ATOFP18/OFP18, putative, expressed -


Gene co-expression network
sample Sobic006G118000 Sobic006G118000 Sobic008G139900 Sobic008G139900 Sobic006G118000--Sobic008G139900 Sobic002G186600 Sobic002G186600 Sobic006G118000--Sobic002G186600 Sobic004G072000 Sobic004G072000 Sobic006G118000--Sobic004G072000 Sobic010G108500 Sobic010G108500 Sobic006G118000--Sobic010G108500 Sobic008G131200 Sobic008G131200 Sobic006G118000--Sobic008G131200 Sobic010G208000 Sobic010G208000 Sobic006G118000--Sobic010G208000 Sobic001G516800 Sobic001G516800 Sobic006G118000--Sobic001G516800 SobicK044200 SobicK044200 Sobic006G118000--SobicK044200 Sobic001G115800 Sobic001G115800 Sobic006G118000--Sobic001G115800 Sobic004G330400 Sobic004G330400 Sobic008G139900--Sobic004G330400 Sobic001G493800 Sobic001G493800 Sobic008G139900--Sobic001G493800 Sobic008G139900--SobicK044200 Sobic008G028500 Sobic008G028500 Sobic008G139900--Sobic008G028500 Sobic003G229150 Sobic003G229150 Sobic008G139900--Sobic003G229150 Sobic005G102100 Sobic005G102100 Sobic008G139900--Sobic005G102100 Sobic002G206200 Sobic002G206200 Sobic008G139900--Sobic002G206200 Sobic006G204000 Sobic006G204000 Sobic008G139900--Sobic006G204000 Sobic003G396900 Sobic003G396900 Sobic008G139900--Sobic003G396900 Sobic002G186600--Sobic008G139900 Sobic002G186600--Sobic004G330400 Sobic002G186600--Sobic003G396900 Sobic002G186600--Sobic001G493800 Sobic006G162700 Sobic006G162700 Sobic002G186600--Sobic006G162700 Sobic002G186600--Sobic002G206200 Sobic009G202900 Sobic009G202900 Sobic002G186600--Sobic009G202900 Sobic003G109400 Sobic003G109400 Sobic002G186600--Sobic003G109400 Sobic002G231800 Sobic002G231800 Sobic002G186600--Sobic002G231800 Sobic004G072000--Sobic010G208000 Sobic004G034500 Sobic004G034500 Sobic004G072000--Sobic004G034500 Sobic010G244600 Sobic010G244600 Sobic004G072000--Sobic010G244600 Sobic004G072000--Sobic008G139900 Sobic007G204400 Sobic007G204400 Sobic004G072000--Sobic007G204400 Sobic004G072000--Sobic001G115800 Sobic004G072000--Sobic008G131200 Sobic004G072000--Sobic006G204000 Sobic010G258700 Sobic010G258700 Sobic004G072000--Sobic010G258700 Sobic010G108500--Sobic006G118000 Sobic004G033900 Sobic004G033900 Sobic010G108500--Sobic004G033900 Sobic001G310800 Sobic001G310800 Sobic010G108500--Sobic001G310800 Sobic010G108500--Sobic002G186600 Sobic008G147101 Sobic008G147101 Sobic010G108500--Sobic008G147101 Sobic002G088200 Sobic002G088200 Sobic010G108500--Sobic002G088200 Sobic004G307700 Sobic004G307700 Sobic010G108500--Sobic004G307700 Sobic010G108500--Sobic001G516800 Sobic009G010700 Sobic009G010700 Sobic010G108500--Sobic009G010700 Sobic008G131200--Sobic001G115800 Sobic004G297800 Sobic004G297800 Sobic008G131200--Sobic004G297800 Sobic008G131200--Sobic008G139900 Sobic008G131200--Sobic004G072000 Sobic008G131200--Sobic010G258700 Sobic006G247500 Sobic006G247500 Sobic008G131200--Sobic006G247500 Sobic004G066300 Sobic004G066300 Sobic008G131200--Sobic004G066300 Sobic006G079100 Sobic006G079100 Sobic008G131200--Sobic006G079100 Sobic003G013100 Sobic003G013100 Sobic008G131200--Sobic003G013100 Sobic001G030200 Sobic001G030200 Sobic010G208000--Sobic001G030200 Sobic010G208000--Sobic001G516800 Sobic010G208000--Sobic004G072000 Sobic010G208000--Sobic004G034500 Sobic002G019900 Sobic002G019900 Sobic010G208000--Sobic002G019900 Sobic010G208000--Sobic008G131200 Sobic009G179800 Sobic009G179800 Sobic010G208000--Sobic009G179800 Sobic004G204500 Sobic004G204500 Sobic010G208000--Sobic004G204500 Sobic010G208000--Sobic004G066300 Sobic001G516800--Sobic010G208000 Sobic002G283800 Sobic002G283800 Sobic001G516800--Sobic002G283800 Sobic001G516800--Sobic001G030200 Sobic001G147400 Sobic001G147400 Sobic001G516800--Sobic001G147400 Sobic001G516800--Sobic004G034500 Sobic001G516800--Sobic002G088200 Sobic001G516800--Sobic002G019900 Sobic001G543500 Sobic001G543500 Sobic001G516800--Sobic001G543500 Sobic001G516800--Sobic009G179800 Sobic002G425900 Sobic002G425900 SobicK044200--Sobic002G425900 Sobic009G154000 Sobic009G154000 SobicK044200--Sobic009G154000 SobicK044200--Sobic004G330400 SobicK044200--Sobic003G109400 Sobic004G354800 Sobic004G354800 SobicK044200--Sobic004G354800 Sobic001G255700 Sobic001G255700 SobicK044200--Sobic001G255700 Sobic009G163500 Sobic009G163500 SobicK044200--Sobic009G163500 Sobic002G284800 Sobic002G284800 SobicK044200--Sobic002G284800 Sobic010G224800 Sobic010G224800 SobicK044200--Sobic010G224800 Sobic004G275500 Sobic004G275500 Sobic001G115800--Sobic004G275500 Sobic003G102800 Sobic003G102800 Sobic001G115800--Sobic003G102800 Sobic001G115800--Sobic010G258700 Sobic003G120400 Sobic003G120400 Sobic001G115800--Sobic003G120400 Sobic002G284901 Sobic002G284901 Sobic001G115800--Sobic002G284901 Sobic001G193400 Sobic001G193400 Sobic001G115800--Sobic001G193400 Sobic001G519300 Sobic001G519300 Sobic001G115800--Sobic001G519300 Sobic002G320900 Sobic002G320900 Sobic001G115800--Sobic002G320900 Sobic010G073300 Sobic010G073300 Sobic001G115800--Sobic010G073300
Octagon: transcription factors


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