Gene annotation
Transcriptome id Sobic.006G204000.2
Synonym APX4, Sb06g027520, TL29,
Functional annotation "Ascorbate peroxidase,heme binding / peroxidase (Os)" (PubMedID : 27208977)
Ascorbate peroxidasel heme binding / peroxidase (Os) (PubMedID : 27208977)
peroxidase precursor, putative, expressed
UniProt A0A1B6PMT8
Pfam PF00141
Panther DB PTHR31356 PTHR31356:SF6
NCBI CDD -
KEGG Orthology K00434; L-ascorbate peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT4G09010 : ascorbate peroxidase 4
RAP-DB (Rice) LOC_Os04g51300.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a009927
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G204000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G309600 wax synthase, putative, expressed -
2 Sobic.001G115800 expressed protein -
3 Sobic.010G258700 arogenate dehydrogenase 1, chloroplast precursor, putative, expressed K15227: arogenate dehydrogenase (NADP+), plant
4 Sobic.008G139900 expressed protein -
5 Sobic.003G120400 expressed protein -
6 Sobic.003G099500 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
7 Sobic.002G284901 - -
8 Sobic.001G460800 nucleotidyltransferase, putative, expressed -
9 Sobic.002G320900 patatin-like phospholipase family protein, expressed -
10 Sobic.001G525000 polygalacturonase, putative, expressed -
11 Sobic.007G093400 - -
12 Sobic.006G069050 - -
13 Sobic.001G130900 expressed protein -
14 Sobic.003G126400 expressed protein -
15 Sobic.003G427500 cytochrome P450, putative, expressed -
16 Sobic.010G136601 - -
17 Sobic.001G519300 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
18 Sobic.004G100400 thaumatin-like protein 1 precursor, putative, expressed -
19 Sobic.002G004100 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
20 Sobic.003G065001 - -


Gene co-expression network
sample Sobic006G204000 Sobic006G204000 Sobic003G309600 Sobic003G309600 Sobic006G204000--Sobic003G309600 Sobic001G115800 Sobic001G115800 Sobic006G204000--Sobic001G115800 Sobic010G258700 Sobic010G258700 Sobic006G204000--Sobic010G258700 Sobic008G139900 Sobic008G139900 Sobic006G204000--Sobic008G139900 Sobic003G120400 Sobic003G120400 Sobic006G204000--Sobic003G120400 Sobic003G099500 Sobic003G099500 Sobic006G204000--Sobic003G099500 Sobic002G284901 Sobic002G284901 Sobic006G204000--Sobic002G284901 Sobic001G460800 Sobic001G460800 Sobic006G204000--Sobic001G460800 Sobic002G320900 Sobic002G320900 Sobic006G204000--Sobic002G320900 Sobic002G218200 Sobic002G218200 Sobic003G309600--Sobic002G218200 Sobic001G410800 Sobic001G410800 Sobic003G309600--Sobic001G410800 Sobic004G357033 Sobic004G357033 Sobic003G309600--Sobic004G357033 Sobic001G220200 Sobic001G220200 Sobic003G309600--Sobic001G220200 Sobic003G309600--Sobic006G204000 Sobic010G096801 Sobic010G096801 Sobic003G309600--Sobic010G096801 Sobic001G139600 Sobic001G139600 Sobic003G309600--Sobic001G139600 Sobic001G519300 Sobic001G519300 Sobic003G309600--Sobic001G519300 Sobic001G535601 Sobic001G535601 Sobic003G309600--Sobic001G535601 Sobic004G275500 Sobic004G275500 Sobic001G115800--Sobic004G275500 Sobic003G102800 Sobic003G102800 Sobic001G115800--Sobic003G102800 Sobic001G115800--Sobic010G258700 Sobic001G115800--Sobic003G120400 Sobic001G115800--Sobic002G284901 Sobic001G193400 Sobic001G193400 Sobic001G115800--Sobic001G193400 Sobic001G115800--Sobic001G519300 Sobic001G115800--Sobic002G320900 Sobic010G073300 Sobic010G073300 Sobic001G115800--Sobic010G073300 Sobic010G258700--Sobic001G115800 Sobic010G258700--Sobic003G102800 Sobic010G258700--Sobic006G204000 Sobic010G258700--Sobic008G139900 Sobic010G258700--Sobic003G309600 Sobic010G258700--Sobic004G275500 Sobic005G042700 Sobic005G042700 Sobic010G258700--Sobic005G042700 Sobic010G136601 Sobic010G136601 Sobic010G258700--Sobic010G136601 Sobic010G258700--Sobic003G120400 Sobic004G330400 Sobic004G330400 Sobic008G139900--Sobic004G330400 Sobic001G493800 Sobic001G493800 Sobic008G139900--Sobic001G493800 SobicK044200 SobicK044200 Sobic008G139900--SobicK044200 Sobic008G028500 Sobic008G028500 Sobic008G139900--Sobic008G028500 Sobic003G229150 Sobic003G229150 Sobic008G139900--Sobic003G229150 Sobic005G102100 Sobic005G102100 Sobic008G139900--Sobic005G102100 Sobic002G206200 Sobic002G206200 Sobic008G139900--Sobic002G206200 Sobic008G139900--Sobic006G204000 Sobic003G396900 Sobic003G396900 Sobic008G139900--Sobic003G396900 Sobic001G525000 Sobic001G525000 Sobic003G120400--Sobic001G525000 Sobic003G120400--Sobic002G320900 Sobic007G093400 Sobic007G093400 Sobic003G120400--Sobic007G093400 Sobic003G120400--Sobic002G284901 Sobic003G200501 Sobic003G200501 Sobic003G120400--Sobic003G200501 Sobic002G210200 Sobic002G210200 Sobic003G120400--Sobic002G210200 Sobic001G130900 Sobic001G130900 Sobic003G120400--Sobic001G130900 Sobic002G430200 Sobic002G430200 Sobic003G120400--Sobic002G430200 Sobic003G367401 Sobic003G367401 Sobic003G120400--Sobic003G367401 Sobic004G239000 Sobic004G239000 Sobic003G099500--Sobic004G239000 Sobic002G387100 Sobic002G387100 Sobic003G099500--Sobic002G387100 Sobic003G099500--Sobic002G430200 Sobic001G016900 Sobic001G016900 Sobic003G099500--Sobic001G016900 Sobic007G122300 Sobic007G122300 Sobic003G099500--Sobic007G122300 Sobic002G284800 Sobic002G284800 Sobic003G099500--Sobic002G284800 Sobic008G131800 Sobic008G131800 Sobic003G099500--Sobic008G131800 Sobic003G368150 Sobic003G368150 Sobic003G099500--Sobic003G368150 Sobic007G111600 Sobic007G111600 Sobic003G099500--Sobic007G111600 Sobic002G284901--Sobic002G320900 Sobic002G284901--Sobic003G200501 Sobic002G284901--Sobic002G210200 Sobic002G284901--Sobic003G120400 Sobic002G284901--Sobic001G525000 Sobic002G284901--Sobic007G093400 Sobic006G065700 Sobic006G065700 Sobic002G284901--Sobic006G065700 Sobic003G067500 Sobic003G067500 Sobic002G284901--Sobic003G067500 Sobic002G284901--Sobic002G430200 Sobic001G460800--Sobic001G525000 Sobic003G167825 Sobic003G167825 Sobic001G460800--Sobic003G167825 Sobic002G004100 Sobic002G004100 Sobic001G460800--Sobic002G004100 Sobic001G460800--Sobic002G320900 Sobic001G460800--Sobic003G120400 Sobic001G460800--Sobic007G093400 Sobic009G085600 Sobic009G085600 Sobic001G460800--Sobic009G085600 Sobic001G460800--Sobic002G284901 Sobic001G460800--Sobic001G016900 Sobic002G320900--Sobic002G284901 Sobic002G320900--Sobic001G525000 Sobic002G320900--Sobic003G120400 Sobic002G320900--Sobic002G210200 Sobic002G320900--Sobic003G200501 Sobic002G320900--Sobic007G093400 Sobic002G320900--Sobic006G065700 Sobic002G320900--Sobic001G460800 Sobic002G320900--Sobic003G367401
Octagon: transcription factors


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