Gene annotation
Transcriptome id Sobic.008G131200.1
Synonym Sb08g018350
Functional annotation DUF538 domain containing protein, putative, expressed
UniProt C5YPU7
Pfam PF04398
Panther DB PTHR31676 PTHR31676:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G09310 : Protein of unknown function, DUF538
RAP-DB (Rice) LOC_Os12g37650.1 : DUF538 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a025442
Brachypodium KQJ86308
Barley -
Wheat TraesCS5A02G086600
Populus -


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cDNA sequences
Sobic.008G131200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G115800 expressed protein -
2 Sobic.004G297800 transferase family protein, putative, expressed -
3 Sobic.008G139900 expressed protein -
4 Sobic.004G072000 ribosome, putative, expressed -
5 Sobic.010G258700 arogenate dehydrogenase 1, chloroplast precursor, putative, expressed K15227: arogenate dehydrogenase (NADP+), plant
6 Sobic.006G247500 terpene synthase, putative, expressed -
7 Sobic.004G066300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.006G079100 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
9 Sobic.003G013100 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.010G208000 ribosomal protein L35, putative, expressed K02916: RP-L35, MRPL35, large subunit ribosomal protein L35
11 Sobic.006G204000 "Ascorbate peroxidase,heme binding / peroxidase (Os)"(PubMedID : 27208977)@Ascorbate peroxidasel heme binding / peroxidase (Os)(PubMedID : 27208977)@peroxidase precursor, putative, expressed K00434: L-ascorbate peroxidase
12 Sobic.K044200 - -
13 Sobic.001G030200 transcription termination factor nusG family protein, expressed -
14 Sobic.003G102800 ZOS1-01 - C2H2 zinc finger protein, expressed -
15 Sobic.001G362800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K06940: uncharacterized protein
16 Sobic.004G275500 helix-loop-helix DNA-binding protein, putative, expressed -
17 Sobic.003G229150 - -
18 Sobic.004G034500 ribosomal protein L3, putative, expressed K02906: RP-L3, MRPL3, large subunit ribosomal protein L3
19 Sobic.008G028500 expressed protein -
20 Sobic.006G118000 expressed protein -


Gene co-expression network
sample Sobic008G131200 Sobic008G131200 Sobic001G115800 Sobic001G115800 Sobic008G131200--Sobic001G115800 Sobic004G297800 Sobic004G297800 Sobic008G131200--Sobic004G297800 Sobic008G139900 Sobic008G139900 Sobic008G131200--Sobic008G139900 Sobic004G072000 Sobic004G072000 Sobic008G131200--Sobic004G072000 Sobic010G258700 Sobic010G258700 Sobic008G131200--Sobic010G258700 Sobic006G247500 Sobic006G247500 Sobic008G131200--Sobic006G247500 Sobic004G066300 Sobic004G066300 Sobic008G131200--Sobic004G066300 Sobic006G079100 Sobic006G079100 Sobic008G131200--Sobic006G079100 Sobic003G013100 Sobic003G013100 Sobic008G131200--Sobic003G013100 Sobic004G275500 Sobic004G275500 Sobic001G115800--Sobic004G275500 Sobic003G102800 Sobic003G102800 Sobic001G115800--Sobic003G102800 Sobic001G115800--Sobic010G258700 Sobic003G120400 Sobic003G120400 Sobic001G115800--Sobic003G120400 Sobic002G284901 Sobic002G284901 Sobic001G115800--Sobic002G284901 Sobic001G193400 Sobic001G193400 Sobic001G115800--Sobic001G193400 Sobic001G519300 Sobic001G519300 Sobic001G115800--Sobic001G519300 Sobic002G320900 Sobic002G320900 Sobic001G115800--Sobic002G320900 Sobic010G073300 Sobic010G073300 Sobic001G115800--Sobic010G073300 Sobic004G297800--Sobic006G079100 Sobic004G297800--Sobic008G131200 Sobic004G297800--Sobic006G247500 SobicK044200 SobicK044200 Sobic004G297800--SobicK044200 Sobic010G014200 Sobic010G014200 Sobic004G297800--Sobic010G014200 Sobic004G128600 Sobic004G128600 Sobic004G297800--Sobic004G128600 Sobic006G280300 Sobic006G280300 Sobic004G297800--Sobic006G280300 Sobic001G362800 Sobic001G362800 Sobic004G297800--Sobic001G362800 Sobic004G297800--Sobic001G115800 Sobic004G330400 Sobic004G330400 Sobic008G139900--Sobic004G330400 Sobic001G493800 Sobic001G493800 Sobic008G139900--Sobic001G493800 Sobic008G139900--SobicK044200 Sobic008G028500 Sobic008G028500 Sobic008G139900--Sobic008G028500 Sobic003G229150 Sobic003G229150 Sobic008G139900--Sobic003G229150 Sobic005G102100 Sobic005G102100 Sobic008G139900--Sobic005G102100 Sobic002G206200 Sobic002G206200 Sobic008G139900--Sobic002G206200 Sobic006G204000 Sobic006G204000 Sobic008G139900--Sobic006G204000 Sobic003G396900 Sobic003G396900 Sobic008G139900--Sobic003G396900 Sobic010G208000 Sobic010G208000 Sobic004G072000--Sobic010G208000 Sobic004G034500 Sobic004G034500 Sobic004G072000--Sobic004G034500 Sobic010G244600 Sobic010G244600 Sobic004G072000--Sobic010G244600 Sobic004G072000--Sobic008G139900 Sobic007G204400 Sobic007G204400 Sobic004G072000--Sobic007G204400 Sobic004G072000--Sobic001G115800 Sobic004G072000--Sobic008G131200 Sobic004G072000--Sobic006G204000 Sobic004G072000--Sobic010G258700 Sobic010G258700--Sobic001G115800 Sobic010G258700--Sobic003G102800 Sobic010G258700--Sobic006G204000 Sobic010G258700--Sobic008G139900 Sobic003G309600 Sobic003G309600 Sobic010G258700--Sobic003G309600 Sobic010G258700--Sobic004G275500 Sobic005G042700 Sobic005G042700 Sobic010G258700--Sobic005G042700 Sobic010G136601 Sobic010G136601 Sobic010G258700--Sobic010G136601 Sobic010G258700--Sobic003G120400 Sobic006G247500--SobicK044200 Sobic009G154000 Sobic009G154000 Sobic006G247500--Sobic009G154000 Sobic002G425900 Sobic002G425900 Sobic006G247500--Sobic002G425900 Sobic001G180300 Sobic001G180300 Sobic006G247500--Sobic001G180300 Sobic006G247500--Sobic008G028500 Sobic010G178900 Sobic010G178900 Sobic006G247500--Sobic010G178900 Sobic006G247500--Sobic004G128600 Sobic006G247500--Sobic004G330400 Sobic006G187600 Sobic006G187600 Sobic006G247500--Sobic006G187600 Sobic001G030200 Sobic001G030200 Sobic004G066300--Sobic001G030200 Sobic004G353900 Sobic004G353900 Sobic004G066300--Sobic004G353900 Sobic004G066300--Sobic008G131200 Sobic004G066300--Sobic001G115800 Sobic004G066300--SobicK044200 Sobic004G066300--Sobic010G208000 Sobic004G066300--Sobic004G297800 Sobic004G066300--Sobic006G247500 Sobic004G066300--Sobic009G154000 Sobic006G079100--Sobic004G297800 Sobic006G079100--Sobic010G014200 Sobic001G263500 Sobic001G263500 Sobic006G079100--Sobic001G263500 Sobic006G079100--Sobic004G128600 Sobic010G161300 Sobic010G161300 Sobic006G079100--Sobic010G161300 Sobic005G226900 Sobic005G226900 Sobic006G079100--Sobic005G226900 Sobic006G079100--Sobic008G131200 Sobic006G079100--Sobic006G247500 Sobic010G179000 Sobic010G179000 Sobic006G079100--Sobic010G179000 Sobic003G013100--Sobic008G131200 Sobic003G013100--Sobic001G115800 Sobic003G013100--Sobic010G258700 Sobic003G013100--Sobic003G102800 Sobic003G013100--Sobic004G072000 Sobic003G013100--Sobic004G275500 Sobic003G013100--Sobic006G204000 Sobic003G013100--Sobic008G139900 Sobic006G118000 Sobic006G118000 Sobic003G013100--Sobic006G118000
Octagon: transcription factors


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