Gene annotation
Transcriptome id Sobic.003G102800.1
Synonym Sb03g008620
Functional annotation ZOS1-01 - C2H2 zinc finger protein, expressed
UniProt C5XEZ7
Pfam PF00929
Panther DB PTHR12801 PTHR12801:SF75
NCBI CDD KOG2249; 3'-5' exonuclease
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G40310 : Exonuclease family protein
RAP-DB (Rice) LOC_Os01g01770.1 : ZOS1-01 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a023807
Brachypodium KQK02300
Barley HORVU4Hr1G083140.2 , HORVU4Hr1G083140.1 , HORVU3Hr1G012170.2 , HORVU3Hr1G012170.3 , HORVU3Hr1G012170.1
Wheat TraesCS3D02G065000 , TraesCS3B02G078100 , TraesCS3D02G065500 , TraesCS3A02G064800 , TraesCS3A02G064600 , TraesCS3A02G064600 , TraesCS4B02G319600 , TraesCS3D02G065100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G115800 expressed protein -
2 Sobic.010G258700 arogenate dehydrogenase 1, chloroplast precursor, putative, expressed K15227: arogenate dehydrogenase (NADP+), plant
3 Sobic.004G275500 helix-loop-helix DNA-binding protein, putative, expressed -
4 Sobic.003G309600 wax synthase, putative, expressed -
5 Sobic.001G519300 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
6 Sobic.002G320900 patatin-like phospholipase family protein, expressed -
7 Sobic.003G120400 expressed protein -
8 Sobic.002G284901 - -
9 Sobic.007G093400 - -
10 Sobic.006G065700 DUF677 domain containing protein, putative, expressed -
11 Sobic.004G357033 - -
12 Sobic.001G223400 glucosyltransferase, putative, expressed -
13 Sobic.004G344301 - -
14 Sobic.007G224600 - -
15 Sobic.001G193400 DUF538 domain containing protein, putative, expressed -
16 Sobic.006G227800 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
17 Sobic.010G136601 - -
18 Sobic.003G200501 - K11252: histone H2B
19 Sobic.002G210200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
20 Sobic.007G221800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B


Gene co-expression network
sample Sobic003G102800 Sobic003G102800 Sobic001G115800 Sobic001G115800 Sobic003G102800--Sobic001G115800 Sobic010G258700 Sobic010G258700 Sobic003G102800--Sobic010G258700 Sobic004G275500 Sobic004G275500 Sobic003G102800--Sobic004G275500 Sobic003G309600 Sobic003G309600 Sobic003G102800--Sobic003G309600 Sobic001G519300 Sobic001G519300 Sobic003G102800--Sobic001G519300 Sobic002G320900 Sobic002G320900 Sobic003G102800--Sobic002G320900 Sobic003G120400 Sobic003G120400 Sobic003G102800--Sobic003G120400 Sobic002G284901 Sobic002G284901 Sobic003G102800--Sobic002G284901 Sobic007G093400 Sobic007G093400 Sobic003G102800--Sobic007G093400 Sobic001G115800--Sobic004G275500 Sobic001G115800--Sobic003G102800 Sobic001G115800--Sobic010G258700 Sobic001G115800--Sobic003G120400 Sobic001G115800--Sobic002G284901 Sobic001G193400 Sobic001G193400 Sobic001G115800--Sobic001G193400 Sobic001G115800--Sobic001G519300 Sobic001G115800--Sobic002G320900 Sobic010G073300 Sobic010G073300 Sobic001G115800--Sobic010G073300 Sobic010G258700--Sobic001G115800 Sobic010G258700--Sobic003G102800 Sobic006G204000 Sobic006G204000 Sobic010G258700--Sobic006G204000 Sobic008G139900 Sobic008G139900 Sobic010G258700--Sobic008G139900 Sobic010G258700--Sobic003G309600 Sobic010G258700--Sobic004G275500 Sobic005G042700 Sobic005G042700 Sobic010G258700--Sobic005G042700 Sobic010G136601 Sobic010G136601 Sobic010G258700--Sobic010G136601 Sobic010G258700--Sobic003G120400 Sobic004G275500--Sobic001G115800 Sobic007G221800 Sobic007G221800 Sobic004G275500--Sobic007G221800 Sobic004G275500--Sobic001G519300 Sobic001G158000 Sobic001G158000 Sobic004G275500--Sobic001G158000 Sobic007G149600 Sobic007G149600 Sobic004G275500--Sobic007G149600 Sobic007G224600 Sobic007G224600 Sobic004G275500--Sobic007G224600 Sobic004G275500--Sobic001G193400 Sobic004G275500--Sobic002G284901 Sobic006G227800 Sobic006G227800 Sobic004G275500--Sobic006G227800 Sobic002G218200 Sobic002G218200 Sobic003G309600--Sobic002G218200 Sobic001G410800 Sobic001G410800 Sobic003G309600--Sobic001G410800 Sobic004G357033 Sobic004G357033 Sobic003G309600--Sobic004G357033 Sobic001G220200 Sobic001G220200 Sobic003G309600--Sobic001G220200 Sobic003G309600--Sobic006G204000 Sobic010G096801 Sobic010G096801 Sobic003G309600--Sobic010G096801 Sobic001G139600 Sobic001G139600 Sobic003G309600--Sobic001G139600 Sobic003G309600--Sobic001G519300 Sobic001G535601 Sobic001G535601 Sobic003G309600--Sobic001G535601 Sobic001G519300--Sobic007G224600 Sobic001G519300--Sobic002G320900 Sobic001G519300--Sobic002G284901 Sobic001G223400 Sobic001G223400 Sobic001G519300--Sobic001G223400 Sobic006G065700 Sobic006G065700 Sobic001G519300--Sobic006G065700 Sobic001G519300--Sobic007G221800 Sobic002G210200 Sobic002G210200 Sobic001G519300--Sobic002G210200 Sobic003G200501 Sobic003G200501 Sobic001G519300--Sobic003G200501 Sobic001G519300--Sobic003G120400 Sobic002G320900--Sobic002G284901 Sobic001G525000 Sobic001G525000 Sobic002G320900--Sobic001G525000 Sobic002G320900--Sobic003G120400 Sobic002G320900--Sobic002G210200 Sobic002G320900--Sobic003G200501 Sobic002G320900--Sobic007G093400 Sobic002G320900--Sobic006G065700 Sobic001G460800 Sobic001G460800 Sobic002G320900--Sobic001G460800 Sobic003G367401 Sobic003G367401 Sobic002G320900--Sobic003G367401 Sobic003G120400--Sobic001G525000 Sobic003G120400--Sobic002G320900 Sobic003G120400--Sobic007G093400 Sobic003G120400--Sobic002G284901 Sobic003G120400--Sobic003G200501 Sobic003G120400--Sobic002G210200 Sobic001G130900 Sobic001G130900 Sobic003G120400--Sobic001G130900 Sobic002G430200 Sobic002G430200 Sobic003G120400--Sobic002G430200 Sobic003G120400--Sobic003G367401 Sobic002G284901--Sobic002G320900 Sobic002G284901--Sobic003G200501 Sobic002G284901--Sobic002G210200 Sobic002G284901--Sobic003G120400 Sobic002G284901--Sobic001G525000 Sobic002G284901--Sobic007G093400 Sobic002G284901--Sobic006G065700 Sobic003G067500 Sobic003G067500 Sobic002G284901--Sobic003G067500 Sobic002G284901--Sobic002G430200 Sobic007G093400--Sobic003G120400 Sobic007G093400--Sobic002G320900 Sobic007G093400--Sobic001G525000 Sobic010G201000 Sobic010G201000 Sobic007G093400--Sobic010G201000 Sobic007G093400--Sobic003G367401 Sobic003G065001 Sobic003G065001 Sobic007G093400--Sobic003G065001 Sobic007G093400--Sobic002G210200 Sobic007G093400--Sobic003G200501 Sobic010G074980 Sobic010G074980 Sobic007G093400--Sobic010G074980
Octagon: transcription factors


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