Gene annotation
Transcriptome id Sobic.003G013100.1
Synonym Sb03g001320
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt C5XKC3
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF272
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT5G45910 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g12320.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a022857 , Zm00025a043630
Brachypodium KQK03356 , KQK04208 , KQK15479 , PNT70453
Barley -
Wheat TraesCS2A02G192100 , TraesCS2A02G192100 , TraesCS3B02G175200 , TraesCS3D02G156000 , TraesCS3B02G175100 , TraesCS3A02G148500 , TraesCS2B02G214000 , TraesCS2B02G214000 , TraesCS2B02G214000 , TraesCS2D02G195400 , TraesCS2D02G195400 , TraesCS2D02G195400 , TraesCS3B02G174900
Populus -


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cDNA sequences
Sobic.003G013100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G131200 DUF538 domain containing protein, putative, expressed -
2 Sobic.001G115800 expressed protein -
3 Sobic.010G258700 arogenate dehydrogenase 1, chloroplast precursor, putative, expressed K15227: arogenate dehydrogenase (NADP+), plant
4 Sobic.003G102800 ZOS1-01 - C2H2 zinc finger protein, expressed -
5 Sobic.004G072000 ribosome, putative, expressed -
6 Sobic.004G275500 helix-loop-helix DNA-binding protein, putative, expressed -
7 Sobic.006G204000 "Ascorbate peroxidase,heme binding / peroxidase (Os)"(PubMedID : 27208977)@Ascorbate peroxidasel heme binding / peroxidase (Os)(PubMedID : 27208977)@peroxidase precursor, putative, expressed K00434: L-ascorbate peroxidase
8 Sobic.008G139900 expressed protein -
9 Sobic.006G118000 expressed protein -
10 Sobic.001G527500 helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.010G189800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
12 Sobic.006G247500 terpene synthase, putative, expressed -
13 Sobic.001G362800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K06940: uncharacterized protein
14 Sobic.004G066300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G365400 DUF584 domain containing protein, putative, expressed -
16 Sobic.003G309600 wax synthase, putative, expressed -
17 Sobic.005G042700 DUF623 domain containing protein, expressed -
18 Sobic.010G244600 nifU, putative, expressed -
19 Sobic.001G519300 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
20 Sobic.002G263900 expressed protein -


Gene co-expression network
sample Sobic003G013100 Sobic003G013100 Sobic008G131200 Sobic008G131200 Sobic003G013100--Sobic008G131200 Sobic001G115800 Sobic001G115800 Sobic003G013100--Sobic001G115800 Sobic010G258700 Sobic010G258700 Sobic003G013100--Sobic010G258700 Sobic003G102800 Sobic003G102800 Sobic003G013100--Sobic003G102800 Sobic004G072000 Sobic004G072000 Sobic003G013100--Sobic004G072000 Sobic004G275500 Sobic004G275500 Sobic003G013100--Sobic004G275500 Sobic006G204000 Sobic006G204000 Sobic003G013100--Sobic006G204000 Sobic008G139900 Sobic008G139900 Sobic003G013100--Sobic008G139900 Sobic006G118000 Sobic006G118000 Sobic003G013100--Sobic006G118000 Sobic008G131200--Sobic001G115800 Sobic004G297800 Sobic004G297800 Sobic008G131200--Sobic004G297800 Sobic008G131200--Sobic008G139900 Sobic008G131200--Sobic004G072000 Sobic008G131200--Sobic010G258700 Sobic006G247500 Sobic006G247500 Sobic008G131200--Sobic006G247500 Sobic004G066300 Sobic004G066300 Sobic008G131200--Sobic004G066300 Sobic006G079100 Sobic006G079100 Sobic008G131200--Sobic006G079100 Sobic008G131200--Sobic003G013100 Sobic001G115800--Sobic004G275500 Sobic001G115800--Sobic003G102800 Sobic001G115800--Sobic010G258700 Sobic003G120400 Sobic003G120400 Sobic001G115800--Sobic003G120400 Sobic002G284901 Sobic002G284901 Sobic001G115800--Sobic002G284901 Sobic001G193400 Sobic001G193400 Sobic001G115800--Sobic001G193400 Sobic001G519300 Sobic001G519300 Sobic001G115800--Sobic001G519300 Sobic002G320900 Sobic002G320900 Sobic001G115800--Sobic002G320900 Sobic010G073300 Sobic010G073300 Sobic001G115800--Sobic010G073300 Sobic010G258700--Sobic001G115800 Sobic010G258700--Sobic003G102800 Sobic010G258700--Sobic006G204000 Sobic010G258700--Sobic008G139900 Sobic003G309600 Sobic003G309600 Sobic010G258700--Sobic003G309600 Sobic010G258700--Sobic004G275500 Sobic005G042700 Sobic005G042700 Sobic010G258700--Sobic005G042700 Sobic010G136601 Sobic010G136601 Sobic010G258700--Sobic010G136601 Sobic010G258700--Sobic003G120400 Sobic003G102800--Sobic001G115800 Sobic003G102800--Sobic010G258700 Sobic003G102800--Sobic004G275500 Sobic003G102800--Sobic003G309600 Sobic003G102800--Sobic001G519300 Sobic003G102800--Sobic002G320900 Sobic003G102800--Sobic003G120400 Sobic003G102800--Sobic002G284901 Sobic007G093400 Sobic007G093400 Sobic003G102800--Sobic007G093400 Sobic010G208000 Sobic010G208000 Sobic004G072000--Sobic010G208000 Sobic004G034500 Sobic004G034500 Sobic004G072000--Sobic004G034500 Sobic010G244600 Sobic010G244600 Sobic004G072000--Sobic010G244600 Sobic004G072000--Sobic008G139900 Sobic007G204400 Sobic007G204400 Sobic004G072000--Sobic007G204400 Sobic004G072000--Sobic001G115800 Sobic004G072000--Sobic008G131200 Sobic004G072000--Sobic006G204000 Sobic004G072000--Sobic010G258700 Sobic004G275500--Sobic001G115800 Sobic007G221800 Sobic007G221800 Sobic004G275500--Sobic007G221800 Sobic004G275500--Sobic001G519300 Sobic001G158000 Sobic001G158000 Sobic004G275500--Sobic001G158000 Sobic007G149600 Sobic007G149600 Sobic004G275500--Sobic007G149600 Sobic007G224600 Sobic007G224600 Sobic004G275500--Sobic007G224600 Sobic004G275500--Sobic001G193400 Sobic004G275500--Sobic002G284901 Sobic006G227800 Sobic006G227800 Sobic004G275500--Sobic006G227800 Sobic006G204000--Sobic003G309600 Sobic006G204000--Sobic001G115800 Sobic006G204000--Sobic010G258700 Sobic006G204000--Sobic008G139900 Sobic006G204000--Sobic003G120400 Sobic003G099500 Sobic003G099500 Sobic006G204000--Sobic003G099500 Sobic006G204000--Sobic002G284901 Sobic001G460800 Sobic001G460800 Sobic006G204000--Sobic001G460800 Sobic006G204000--Sobic002G320900 Sobic004G330400 Sobic004G330400 Sobic008G139900--Sobic004G330400 Sobic001G493800 Sobic001G493800 Sobic008G139900--Sobic001G493800 SobicK044200 SobicK044200 Sobic008G139900--SobicK044200 Sobic008G028500 Sobic008G028500 Sobic008G139900--Sobic008G028500 Sobic003G229150 Sobic003G229150 Sobic008G139900--Sobic003G229150 Sobic005G102100 Sobic005G102100 Sobic008G139900--Sobic005G102100 Sobic002G206200 Sobic002G206200 Sobic008G139900--Sobic002G206200 Sobic008G139900--Sobic006G204000 Sobic003G396900 Sobic003G396900 Sobic008G139900--Sobic003G396900 Sobic006G118000--Sobic008G139900 Sobic002G186600 Sobic002G186600 Sobic006G118000--Sobic002G186600 Sobic006G118000--Sobic004G072000 Sobic010G108500 Sobic010G108500 Sobic006G118000--Sobic010G108500 Sobic006G118000--Sobic008G131200 Sobic006G118000--Sobic010G208000 Sobic001G516800 Sobic001G516800 Sobic006G118000--Sobic001G516800 Sobic006G118000--SobicK044200 Sobic006G118000--Sobic001G115800
Octagon: transcription factors


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