Gene annotation
Transcriptome id Sobic.010G244600.1
Synonym NFU3, ATCNFU3
Functional annotation nifU, putative, expressed
UniProt A0A194YLB0
Pfam PF01106
Panther DB PTHR11178 PTHR11178:SF26
NCBI CDD KOG2358; NifU-like domain-containing proteins
KEGG Orthology -
Gene Ontology GO:0016226; iron-sulfur cluster assembly GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT4G25910 : NFU domain protein 3
RAP-DB (Rice) LOC_Os06g47940.1 : nifU, putative, expressed
MaizeGDB (Corn) Zm00025a041812
Brachypodium KQK17324
Barley HORVU7Hr1G098660.4 , HORVU7Hr1G098660.5 , HORVU7Hr1G098660.6 , HORVU7Hr1G098660.2 , HORVU7Hr1G098660.3
Wheat TraesCS7B02G329500 , TraesCS7D02G421500 , TraesCS7A02G429400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G204400 expressed protein -
2 Sobic.004G072000 ribosome, putative, expressed -
3 Sobic.005G208500 ankyrin repeat family protein, putative, expressed -
4 Sobic.003G336200 expressed protein -
5 Sobic.005G005500 macrophage migration inhibitory factor, putative, expressed -
6 Sobic.006G204000 "Ascorbate peroxidase,heme binding / peroxidase (Os)"(PubMedID : 27208977)@Ascorbate peroxidasel heme binding / peroxidase (Os)(PubMedID : 27208977)@peroxidase precursor, putative, expressed K00434: L-ascorbate peroxidase
7 Sobic.003G309600 wax synthase, putative, expressed -
8 Sobic.007G013500 expressed protein -
9 Sobic.001G543500 "generic sugar transporter, up-regulated under drought stress "(PubMedID : 24655390)@Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@transporter family protein, putative, expressed -
10 Sobic.008G139900 expressed protein -
11 Sobic.001G178200 - -
12 Sobic.004G124800 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
13 Sobic.006G118000 expressed protein -
14 Sobic.001G115800 expressed protein -
15 Sobic.004G034500 ribosomal protein L3, putative, expressed K02906: RP-L3, MRPL3, large subunit ribosomal protein L3
16 Sobic.009G255300 OsClp8 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
17 Sobic.010G258700 arogenate dehydrogenase 1, chloroplast precursor, putative, expressed K15227: arogenate dehydrogenase (NADP+), plant
18 Sobic.003G102800 ZOS1-01 - C2H2 zinc finger protein, expressed -
19 Sobic.009G237800 expressed protein -
20 Sobic.002G088200 expressed protein -


Gene co-expression network
sample Sobic010G244600 Sobic010G244600 Sobic007G204400 Sobic007G204400 Sobic010G244600--Sobic007G204400 Sobic004G072000 Sobic004G072000 Sobic010G244600--Sobic004G072000 Sobic005G208500 Sobic005G208500 Sobic010G244600--Sobic005G208500 Sobic003G336200 Sobic003G336200 Sobic010G244600--Sobic003G336200 Sobic005G005500 Sobic005G005500 Sobic010G244600--Sobic005G005500 Sobic006G204000 Sobic006G204000 Sobic010G244600--Sobic006G204000 Sobic003G309600 Sobic003G309600 Sobic010G244600--Sobic003G309600 Sobic007G013500 Sobic007G013500 Sobic010G244600--Sobic007G013500 Sobic001G543500 Sobic001G543500 Sobic010G244600--Sobic001G543500 Sobic007G204400--Sobic010G244600 Sobic007G204400--Sobic004G072000 Sobic007G204400--Sobic005G208500 Sobic007G204400--Sobic006G204000 Sobic006G127300 Sobic006G127300 Sobic007G204400--Sobic006G127300 Sobic003G264700 Sobic003G264700 Sobic007G204400--Sobic003G264700 Sobic009G125500 Sobic009G125500 Sobic007G204400--Sobic009G125500 Sobic004G023400 Sobic004G023400 Sobic007G204400--Sobic004G023400 Sobic009G237800 Sobic009G237800 Sobic007G204400--Sobic009G237800 Sobic010G208000 Sobic010G208000 Sobic004G072000--Sobic010G208000 Sobic004G034500 Sobic004G034500 Sobic004G072000--Sobic004G034500 Sobic004G072000--Sobic010G244600 Sobic008G139900 Sobic008G139900 Sobic004G072000--Sobic008G139900 Sobic004G072000--Sobic007G204400 Sobic001G115800 Sobic001G115800 Sobic004G072000--Sobic001G115800 Sobic008G131200 Sobic008G131200 Sobic004G072000--Sobic008G131200 Sobic004G072000--Sobic006G204000 Sobic010G258700 Sobic010G258700 Sobic004G072000--Sobic010G258700 Sobic005G208500--Sobic003G309600 Sobic005G208500--Sobic006G204000 Sobic001G378550 Sobic001G378550 Sobic005G208500--Sobic001G378550 Sobic005G208500--Sobic010G244600 Sobic002G218200 Sobic002G218200 Sobic005G208500--Sobic002G218200 Sobic005G208500--Sobic009G125500 Sobic004G124800 Sobic004G124800 Sobic005G208500--Sobic004G124800 Sobic001G139600 Sobic001G139600 Sobic005G208500--Sobic001G139600 Sobic010G206700 Sobic010G206700 Sobic005G208500--Sobic010G206700 Sobic003G336200--Sobic010G244600 Sobic003G336200--Sobic004G072000 Sobic003G336200--Sobic001G543500 Sobic002G088200 Sobic002G088200 Sobic003G336200--Sobic002G088200 Sobic003G107100 Sobic003G107100 Sobic003G336200--Sobic003G107100 Sobic009G255300 Sobic009G255300 Sobic003G336200--Sobic009G255300 Sobic005G169800 Sobic005G169800 Sobic003G336200--Sobic005G169800 Sobic003G336200--Sobic004G034500 Sobic003G336200--Sobic007G204400 Sobic005G005500--Sobic008G139900 Sobic005G005500--Sobic004G072000 Sobic005G005500--Sobic006G204000 Sobic003G229150 Sobic003G229150 Sobic005G005500--Sobic003G229150 Sobic004G330400 Sobic004G330400 Sobic005G005500--Sobic004G330400 Sobic005G005500--Sobic010G244600 Sobic002G186600 Sobic002G186600 Sobic005G005500--Sobic002G186600 Sobic005G102100 Sobic005G102100 Sobic005G005500--Sobic005G102100 Sobic005G005500--Sobic001G543500 Sobic006G204000--Sobic003G309600 Sobic006G204000--Sobic001G115800 Sobic006G204000--Sobic010G258700 Sobic006G204000--Sobic008G139900 Sobic003G120400 Sobic003G120400 Sobic006G204000--Sobic003G120400 Sobic003G099500 Sobic003G099500 Sobic006G204000--Sobic003G099500 Sobic002G284901 Sobic002G284901 Sobic006G204000--Sobic002G284901 Sobic001G460800 Sobic001G460800 Sobic006G204000--Sobic001G460800 Sobic002G320900 Sobic002G320900 Sobic006G204000--Sobic002G320900 Sobic003G309600--Sobic002G218200 Sobic001G410800 Sobic001G410800 Sobic003G309600--Sobic001G410800 Sobic004G357033 Sobic004G357033 Sobic003G309600--Sobic004G357033 Sobic001G220200 Sobic001G220200 Sobic003G309600--Sobic001G220200 Sobic003G309600--Sobic006G204000 Sobic010G096801 Sobic010G096801 Sobic003G309600--Sobic010G096801 Sobic003G309600--Sobic001G139600 Sobic001G519300 Sobic001G519300 Sobic003G309600--Sobic001G519300 Sobic001G535601 Sobic001G535601 Sobic003G309600--Sobic001G535601 Sobic003G179100 Sobic003G179100 Sobic007G013500--Sobic003G179100 Sobic007G013500--Sobic001G115800 Sobic010G073300 Sobic010G073300 Sobic007G013500--Sobic010G073300 Sobic007G013500--Sobic009G255300 Sobic006G278500 Sobic006G278500 Sobic007G013500--Sobic006G278500 Sobic004G192700 Sobic004G192700 Sobic007G013500--Sobic004G192700 Sobic006G139600 Sobic006G139600 Sobic007G013500--Sobic006G139600 Sobic007G013500--Sobic001G519300 Sobic004G275500 Sobic004G275500 Sobic007G013500--Sobic004G275500 Sobic001G543500--Sobic002G088200 Sobic001G543500--Sobic004G072000 Sobic001G543500--Sobic008G139900 Sobic001G516800 Sobic001G516800 Sobic001G543500--Sobic001G516800 Sobic001G543500--Sobic010G208000 Sobic001G543500--Sobic004G034500 Sobic004G033900 Sobic004G033900 Sobic001G543500--Sobic004G033900 Sobic001G543500--Sobic005G005500 Sobic002G314200 Sobic002G314200 Sobic001G543500--Sobic002G314200
Octagon: transcription factors


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