Gene annotation
Transcriptome id Sobic.001G178200.1
Synonym
Functional annotation -
UniProt A0A1B6QJJ3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G080600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLH1 - cellulose synthase-like family H, expressed -
2 Sobic.002G052500 - -
3 Sobic.005G208500 ankyrin repeat family protein, putative, expressed -
4 Sobic.006G272450 - -
5 Sobic.001G378550 - -
6 Sobic.010G244600 nifU, putative, expressed -
7 Sobic.001G184900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@"Expressed protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659837)@expressed protein -
8 Sobic.001G339900 - -
9 Sobic.009G125500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.006G136900 transferase family protein, putative, expressed -
11 Sobic.008G168000 Methyltransferase small domain containing protein, expressed K02493: hemK, prmC, release factor glutamine methyltransferase
12 Sobic.009G070900 - -
13 Sobic.001G418650 - -
14 Sobic.005G037500 expressed protein -
15 Sobic.006G185400 - -
16 Sobic.009G194600 expressed protein -
17 Sobic.004G330500 expressed protein -
18 Sobic.004G124800 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
19 Sobic.003G174850 - -
20 Sobic.005G189400 MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein


Gene co-expression network
sample Sobic001G178200 Sobic001G178200 Sobic006G080600 Sobic006G080600 Sobic001G178200--Sobic006G080600 Sobic002G052500 Sobic002G052500 Sobic001G178200--Sobic002G052500 Sobic005G208500 Sobic005G208500 Sobic001G178200--Sobic005G208500 Sobic006G272450 Sobic006G272450 Sobic001G178200--Sobic006G272450 Sobic001G378550 Sobic001G378550 Sobic001G178200--Sobic001G378550 Sobic010G244600 Sobic010G244600 Sobic001G178200--Sobic010G244600 Sobic001G184900 Sobic001G184900 Sobic001G178200--Sobic001G184900 Sobic001G339900 Sobic001G339900 Sobic001G178200--Sobic001G339900 Sobic009G125500 Sobic009G125500 Sobic001G178200--Sobic009G125500 Sobic006G080600--Sobic001G178200 Sobic006G080600--Sobic009G125500 Sobic006G080600--Sobic005G208500 Sobic002G228400 Sobic002G228400 Sobic006G080600--Sobic002G228400 Sobic004G124800 Sobic004G124800 Sobic006G080600--Sobic004G124800 Sobic007G204400 Sobic007G204400 Sobic006G080600--Sobic007G204400 Sobic006G080600--Sobic001G378550 Sobic006G080600--Sobic001G339900 Sobic003G174850 Sobic003G174850 Sobic006G080600--Sobic003G174850 Sobic007G072901 Sobic007G072901 Sobic002G052500--Sobic007G072901 Sobic003G245700 Sobic003G245700 Sobic002G052500--Sobic003G245700 Sobic003G343100 Sobic003G343100 Sobic002G052500--Sobic003G343100 Sobic008G023500 Sobic008G023500 Sobic002G052500--Sobic008G023500 Sobic006G090201 Sobic006G090201 Sobic002G052500--Sobic006G090201 Sobic006G185400 Sobic006G185400 Sobic002G052500--Sobic006G185400 Sobic009G010800 Sobic009G010800 Sobic002G052500--Sobic009G010800 Sobic003G178200 Sobic003G178200 Sobic002G052500--Sobic003G178200 Sobic004G330500 Sobic004G330500 Sobic002G052500--Sobic004G330500 Sobic003G309600 Sobic003G309600 Sobic005G208500--Sobic003G309600 Sobic006G204000 Sobic006G204000 Sobic005G208500--Sobic006G204000 Sobic005G208500--Sobic001G378550 Sobic005G208500--Sobic010G244600 Sobic002G218200 Sobic002G218200 Sobic005G208500--Sobic002G218200 Sobic005G208500--Sobic009G125500 Sobic005G208500--Sobic004G124800 Sobic001G139600 Sobic001G139600 Sobic005G208500--Sobic001G139600 Sobic010G206700 Sobic010G206700 Sobic005G208500--Sobic010G206700 Sobic009G164200 Sobic009G164200 Sobic006G272450--Sobic009G164200 Sobic006G272450--Sobic008G023500 Sobic006G272450--Sobic006G090201 Sobic006G272450--Sobic009G010800 Sobic009G070900 Sobic009G070900 Sobic006G272450--Sobic009G070900 Sobic006G272450--Sobic006G185400 Sobic006G272450--Sobic003G245700 Sobic006G272450--Sobic004G330500 Sobic005G189400 Sobic005G189400 Sobic006G272450--Sobic005G189400 Sobic001G378550--Sobic006G185400 Sobic001G378550--Sobic004G330500 Sobic001G378550--Sobic003G343100 Sobic007G152200 Sobic007G152200 Sobic001G378550--Sobic007G152200 Sobic001G378550--Sobic005G189400 Sobic005G037500 Sobic005G037500 Sobic001G378550--Sobic005G037500 Sobic002G205201 Sobic002G205201 Sobic001G378550--Sobic002G205201 Sobic001G361500 Sobic001G361500 Sobic001G378550--Sobic001G361500 Sobic006G209100 Sobic006G209100 Sobic001G378550--Sobic006G209100 Sobic010G244600--Sobic007G204400 Sobic004G072000 Sobic004G072000 Sobic010G244600--Sobic004G072000 Sobic010G244600--Sobic005G208500 Sobic003G336200 Sobic003G336200 Sobic010G244600--Sobic003G336200 Sobic005G005500 Sobic005G005500 Sobic010G244600--Sobic005G005500 Sobic010G244600--Sobic006G204000 Sobic010G244600--Sobic003G309600 Sobic007G013500 Sobic007G013500 Sobic010G244600--Sobic007G013500 Sobic001G543500 Sobic001G543500 Sobic010G244600--Sobic001G543500 Sobic001G184900--Sobic001G178200 Sobic010G004001 Sobic010G004001 Sobic001G184900--Sobic010G004001 Sobic002G410050 Sobic002G410050 Sobic001G184900--Sobic002G410050 Sobic001G184900--Sobic005G037500 Sobic001G184900--Sobic002G052500 Sobic006G136900 Sobic006G136900 Sobic001G184900--Sobic006G136900 Sobic010G173550 Sobic010G173550 Sobic001G184900--Sobic010G173550 Sobic001G184900--Sobic004G330500 Sobic001G184900--Sobic006G185400 Sobic001G339900--Sobic001G378550 Sobic001G339900--Sobic006G272450 Sobic001G339900--Sobic002G052500 Sobic009G116766 Sobic009G116766 Sobic001G339900--Sobic009G116766 Sobic001G339900--Sobic003G245700 Sobic008G078600 Sobic008G078600 Sobic001G339900--Sobic008G078600 Sobic001G339900--Sobic009G010800 Sobic001G339900--Sobic006G185400 Sobic001G339900--Sobic001G361500 Sobic009G125500--Sobic005G208500 Sobic009G125500--Sobic010G206700 Sobic009G125500--Sobic003G309600 Sobic010G036000 Sobic010G036000 Sobic009G125500--Sobic010G036000 Sobic009G125500--Sobic001G139600 Sobic009G125500--Sobic002G218200 Sobic010G158100 Sobic010G158100 Sobic009G125500--Sobic010G158100 Sobic005G232200 Sobic005G232200 Sobic009G125500--Sobic005G232200 Sobic009G125500--Sobic007G204400
Octagon: transcription factors


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