Gene annotation
Transcriptome id Sobic.007G013500.1
Synonym Sb07g001240
Functional annotation expressed protein
UniProt C5YLY6
Pfam -
Panther DB PTHR37191
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G33810 : -
RAP-DB (Rice) LOC_Os08g02060.1 : expressed protein
MaizeGDB (Corn) Zm00025a040223
Brachypodium KQJ94841
Barley HORVU7Hr1G076320.1 , HORVU7Hr1G076320.2
Wheat TraesCS7D02G316000 , TraesCS7B02G220300 , TraesCS7B02G220300
Populus -


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cDNA sequences
Sobic.007G013500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G179100 protein binding protein, putative, expressed K12821: PRPF40, pre-mRNA-processing factor 40
2 Sobic.001G115800 expressed protein -
3 Sobic.010G073300 expressed protein -
4 Sobic.009G255300 OsClp8 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
5 Sobic.006G278500 class I glutamine amidotransferase, putative, expressed K01951: guaA, GMP synthase (glutamine-hydrolysing)
6 Sobic.004G192700 dynein light chain type 1 family protein, putative, expressed K10418: dynein light chain LC8-type
7 Sobic.006G139600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@plant protein of unknown function domain containing protein, expressed -
8 Sobic.001G519300 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
9 Sobic.004G275500 helix-loop-helix DNA-binding protein, putative, expressed -
10 Sobic.002G284901 - -
11 Sobic.007G106400 endothelial differentiation-related factor 1, putative, expressed K03627: putative transcription factor
12 Sobic.003G067500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
13 Sobic.004G072000 ribosome, putative, expressed -
14 Sobic.006G227800 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
15 Sobic.001G429100 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
16 Sobic.002G276700 protein of unknown function containing protein, expressed -
17 Sobic.002G320900 patatin-like phospholipase family protein, expressed -
18 Sobic.001G051500 - K13179: DDX18, ATP-dependent RNA helicase DDX18/HAS1
19 Sobic.008G139900 expressed protein -
20 Sobic.007G224600 - -


Gene co-expression network
sample Sobic007G013500 Sobic007G013500 Sobic003G179100 Sobic003G179100 Sobic007G013500--Sobic003G179100 Sobic001G115800 Sobic001G115800 Sobic007G013500--Sobic001G115800 Sobic010G073300 Sobic010G073300 Sobic007G013500--Sobic010G073300 Sobic009G255300 Sobic009G255300 Sobic007G013500--Sobic009G255300 Sobic006G278500 Sobic006G278500 Sobic007G013500--Sobic006G278500 Sobic004G192700 Sobic004G192700 Sobic007G013500--Sobic004G192700 Sobic006G139600 Sobic006G139600 Sobic007G013500--Sobic006G139600 Sobic001G519300 Sobic001G519300 Sobic007G013500--Sobic001G519300 Sobic004G275500 Sobic004G275500 Sobic007G013500--Sobic004G275500 Sobic003G179100--Sobic010G073300 Sobic002G284901 Sobic002G284901 Sobic003G179100--Sobic002G284901 Sobic002G320900 Sobic002G320900 Sobic003G179100--Sobic002G320900 Sobic003G120400 Sobic003G120400 Sobic003G179100--Sobic003G120400 Sobic001G525000 Sobic001G525000 Sobic003G179100--Sobic001G525000 Sobic006G065700 Sobic006G065700 Sobic003G179100--Sobic006G065700 Sobic002G430200 Sobic002G430200 Sobic003G179100--Sobic002G430200 Sobic002G387100 Sobic002G387100 Sobic003G179100--Sobic002G387100 Sobic003G179100--Sobic001G519300 Sobic001G115800--Sobic004G275500 Sobic003G102800 Sobic003G102800 Sobic001G115800--Sobic003G102800 Sobic010G258700 Sobic010G258700 Sobic001G115800--Sobic010G258700 Sobic001G115800--Sobic003G120400 Sobic001G115800--Sobic002G284901 Sobic001G193400 Sobic001G193400 Sobic001G115800--Sobic001G193400 Sobic001G115800--Sobic001G519300 Sobic001G115800--Sobic002G320900 Sobic001G115800--Sobic010G073300 Sobic010G073300--Sobic002G284901 Sobic010G073300--Sobic003G120400 Sobic010G073300--Sobic001G525000 Sobic010G073300--Sobic002G320900 Sobic010G073300--Sobic002G430200 Sobic001G130900 Sobic001G130900 Sobic010G073300--Sobic001G130900 Sobic003G200501 Sobic003G200501 Sobic010G073300--Sobic003G200501 Sobic010G073300--Sobic002G387100 Sobic002G210200 Sobic002G210200 Sobic010G073300--Sobic002G210200 Sobic009G255300--Sobic003G179100 Sobic009G255300--Sobic007G013500 Sobic009G255300--Sobic006G278500 Sobic010G036000 Sobic010G036000 Sobic009G255300--Sobic010G036000 Sobic002G285300 Sobic002G285300 Sobic009G255300--Sobic002G285300 Sobic004G072000 Sobic004G072000 Sobic009G255300--Sobic004G072000 Sobic009G255300--Sobic010G073300 Sobic003G440400 Sobic003G440400 Sobic009G255300--Sobic003G440400 Sobic008G139900 Sobic008G139900 Sobic009G255300--Sobic008G139900 Sobic006G278500--Sobic003G179100 Sobic006G278500--Sobic002G430200 Sobic006G278500--Sobic002G387100 Sobic007G122300 Sobic007G122300 Sobic006G278500--Sobic007G122300 Sobic006G278500--Sobic010G073300 Sobic001G213400 Sobic001G213400 Sobic006G278500--Sobic001G213400 Sobic002G284800 Sobic002G284800 Sobic006G278500--Sobic002G284800 Sobic006G278500--Sobic002G284901 Sobic003G368150 Sobic003G368150 Sobic006G278500--Sobic003G368150 Sobic004G265400 Sobic004G265400 Sobic004G192700--Sobic004G265400 Sobic003G067500 Sobic003G067500 Sobic004G192700--Sobic003G067500 Sobic007G149600 Sobic007G149600 Sobic004G192700--Sobic007G149600 Sobic004G192700--Sobic003G200501 Sobic004G192700--Sobic002G210200 Sobic007G221800 Sobic007G221800 Sobic004G192700--Sobic007G221800 Sobic004G192700--Sobic010G073300 Sobic003G067300 Sobic003G067300 Sobic004G192700--Sobic003G067300 Sobic004G192700--Sobic002G284901 Sobic006G139600--Sobic001G519300 Sobic006G139600--Sobic007G221800 Sobic006G139600--Sobic010G073300 Sobic007G224600 Sobic007G224600 Sobic006G139600--Sobic007G224600 Sobic006G139600--Sobic003G067500 Sobic006G139600--Sobic003G200501 Sobic006G139600--Sobic002G284901 Sobic006G139600--Sobic004G192700 Sobic006G139600--Sobic002G210200 Sobic001G519300--Sobic007G224600 Sobic001G519300--Sobic002G320900 Sobic001G519300--Sobic002G284901 Sobic001G223400 Sobic001G223400 Sobic001G519300--Sobic001G223400 Sobic001G519300--Sobic006G065700 Sobic001G519300--Sobic007G221800 Sobic001G519300--Sobic002G210200 Sobic001G519300--Sobic003G200501 Sobic001G519300--Sobic003G120400 Sobic004G275500--Sobic001G115800 Sobic004G275500--Sobic007G221800 Sobic004G275500--Sobic001G519300 Sobic001G158000 Sobic001G158000 Sobic004G275500--Sobic001G158000 Sobic004G275500--Sobic007G149600 Sobic004G275500--Sobic007G224600 Sobic004G275500--Sobic001G193400 Sobic004G275500--Sobic002G284901 Sobic006G227800 Sobic006G227800 Sobic004G275500--Sobic006G227800
Octagon: transcription factors


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