Gene annotation
Transcriptome id Sobic.006G139600.1
Synonym Sb06g021880
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
plant protein of unknown function domain containing protein, expressed
UniProt C5YBV2
Pfam PF03140
Panther DB PTHR31549 PTHR31549:SF25
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50120 : Plant protein of unknown function (DUF247)
RAP-DB (Rice) LOC_Os04g42650.1 : plant protein of unknown function domain containing protein, expressed
MaizeGDB (Corn) Zm00025a056433
Brachypodium KQJ83450
Barley HORVU2Hr1G087510.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G519300 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
2 Sobic.007G221800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
3 Sobic.010G073300 expressed protein -
4 Sobic.007G224600 - -
5 Sobic.003G067500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
6 Sobic.003G200501 - K11252: histone H2B
7 Sobic.002G284901 - -
8 Sobic.004G192700 dynein light chain type 1 family protein, putative, expressed K10418: dynein light chain LC8-type
9 Sobic.002G210200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
10 Sobic.002G320900 patatin-like phospholipase family protein, expressed -
11 Sobic.006G227800 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
12 Sobic.004G265400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
13 Sobic.007G149600 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
14 Sobic.001G158000 selT/selW/selH selenoprotein domain containing protein, expressed -
15 Sobic.004G275500 helix-loop-helix DNA-binding protein, putative, expressed -
16 Sobic.006G065700 DUF677 domain containing protein, putative, expressed -
17 Sobic.001G223400 glucosyltransferase, putative, expressed -
18 Sobic.003G120400 expressed protein -
19 Sobic.001G525000 polygalacturonase, putative, expressed -
20 Sobic.002G263900 expressed protein -


Gene co-expression network
sample Sobic006G139600 Sobic006G139600 Sobic001G519300 Sobic001G519300 Sobic006G139600--Sobic001G519300 Sobic007G221800 Sobic007G221800 Sobic006G139600--Sobic007G221800 Sobic010G073300 Sobic010G073300 Sobic006G139600--Sobic010G073300 Sobic007G224600 Sobic007G224600 Sobic006G139600--Sobic007G224600 Sobic003G067500 Sobic003G067500 Sobic006G139600--Sobic003G067500 Sobic003G200501 Sobic003G200501 Sobic006G139600--Sobic003G200501 Sobic002G284901 Sobic002G284901 Sobic006G139600--Sobic002G284901 Sobic004G192700 Sobic004G192700 Sobic006G139600--Sobic004G192700 Sobic002G210200 Sobic002G210200 Sobic006G139600--Sobic002G210200 Sobic001G519300--Sobic007G224600 Sobic002G320900 Sobic002G320900 Sobic001G519300--Sobic002G320900 Sobic001G519300--Sobic002G284901 Sobic001G223400 Sobic001G223400 Sobic001G519300--Sobic001G223400 Sobic006G065700 Sobic006G065700 Sobic001G519300--Sobic006G065700 Sobic001G519300--Sobic007G221800 Sobic001G519300--Sobic002G210200 Sobic001G519300--Sobic003G200501 Sobic003G120400 Sobic003G120400 Sobic001G519300--Sobic003G120400 Sobic007G149600 Sobic007G149600 Sobic007G221800--Sobic007G149600 Sobic007G221800--Sobic003G200501 Sobic007G221800--Sobic002G210200 Sobic004G265400 Sobic004G265400 Sobic007G221800--Sobic004G265400 Sobic007G221800--Sobic003G067500 Sobic007G221800--Sobic002G284901 Sobic007G221800--Sobic002G320900 Sobic003G067300 Sobic003G067300 Sobic007G221800--Sobic003G067300 Sobic007G093400 Sobic007G093400 Sobic007G221800--Sobic007G093400 Sobic010G073300--Sobic002G284901 Sobic010G073300--Sobic003G120400 Sobic001G525000 Sobic001G525000 Sobic010G073300--Sobic001G525000 Sobic010G073300--Sobic002G320900 Sobic002G430200 Sobic002G430200 Sobic010G073300--Sobic002G430200 Sobic001G130900 Sobic001G130900 Sobic010G073300--Sobic001G130900 Sobic010G073300--Sobic003G200501 Sobic002G387100 Sobic002G387100 Sobic010G073300--Sobic002G387100 Sobic010G073300--Sobic002G210200 Sobic007G224600--Sobic001G519300 Sobic007G224600--Sobic002G320900 Sobic007G224600--Sobic002G284901 Sobic007G224600--Sobic007G221800 Sobic007G224600--Sobic002G210200 Sobic007G224600--Sobic001G130900 Sobic007G224600--Sobic003G200501 Sobic007G224600--Sobic007G093400 Sobic007G224600--Sobic006G065700 Sobic003G067500--Sobic003G200501 Sobic003G067500--Sobic002G210200 Sobic003G067500--Sobic003G067300 Sobic003G067500--Sobic002G284901 Sobic003G067500--Sobic007G221800 Sobic003G067500--Sobic002G320900 Sobic003G067500--Sobic004G265400 Sobic003G067500--Sobic001G525000 Sobic003G067500--Sobic003G120400 Sobic003G200501--Sobic002G210200 Sobic003G200501--Sobic003G067500 Sobic003G200501--Sobic002G284901 Sobic003G200501--Sobic002G320900 Sobic003G200501--Sobic003G120400 Sobic003G200501--Sobic001G525000 Sobic003G200501--Sobic003G067300 Sobic003G200501--Sobic007G221800 Sobic003G200501--Sobic007G093400 Sobic002G284901--Sobic002G320900 Sobic002G284901--Sobic003G200501 Sobic002G284901--Sobic002G210200 Sobic002G284901--Sobic003G120400 Sobic002G284901--Sobic001G525000 Sobic002G284901--Sobic007G093400 Sobic002G284901--Sobic006G065700 Sobic002G284901--Sobic003G067500 Sobic002G284901--Sobic002G430200 Sobic004G192700--Sobic004G265400 Sobic004G192700--Sobic003G067500 Sobic004G192700--Sobic007G149600 Sobic004G192700--Sobic003G200501 Sobic004G192700--Sobic002G210200 Sobic004G192700--Sobic007G221800 Sobic004G192700--Sobic010G073300 Sobic004G192700--Sobic003G067300 Sobic004G192700--Sobic002G284901 Sobic002G210200--Sobic003G200501 Sobic002G210200--Sobic003G067500 Sobic002G210200--Sobic002G320900 Sobic002G210200--Sobic002G284901 Sobic002G210200--Sobic001G525000 Sobic002G210200--Sobic003G120400 Sobic002G210200--Sobic007G093400 Sobic002G210200--Sobic003G067300 Sobic002G210200--Sobic007G221800
Octagon: transcription factors


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