Gene annotation
Transcriptome id Sobic.002G263900.3,Sobic.002G263900.4
Synonym Sb02g029850
Functional annotation expressed protein
UniProt A0A1W0W5T3 , A0A1W0W5Z6
Pfam PF14953
Panther DB PTHR31366
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G59490 : -
RAP-DB (Rice) LOC_Os09g33992.2,LOC_Os09g33992.1 : expressed protein
MaizeGDB (Corn) Zm00025a050686 , Zm00025a047657
Brachypodium KQJ91023
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.002G263900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G073300 expressed protein -
2 Sobic.002G320900 patatin-like phospholipase family protein, expressed -
3 Sobic.007G224600 - -
4 Sobic.002G284901 - -
5 Sobic.006G065700 DUF677 domain containing protein, putative, expressed -
6 Sobic.010G074980 - -
7 Sobic.001G519300 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
8 Sobic.003G120400 expressed protein -
9 Sobic.007G093400 - -
10 Sobic.002G210200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
11 Sobic.003G200501 - K11252: histone H2B
12 Sobic.001G130900 expressed protein -
13 Sobic.001G525000 polygalacturonase, putative, expressed -
14 Sobic.003G065001 - -
15 Sobic.007G221800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
16 Sobic.003G149500 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
17 Sobic.001G223400 glucosyltransferase, putative, expressed -
18 Sobic.010G201000 - -
19 Sobic.004G082151 - -
20 Sobic.003G367401 - -


Gene co-expression network
sample Sobic002G263900 Sobic002G263900 Sobic010G073300 Sobic010G073300 Sobic002G263900--Sobic010G073300 Sobic002G320900 Sobic002G320900 Sobic002G263900--Sobic002G320900 Sobic007G224600 Sobic007G224600 Sobic002G263900--Sobic007G224600 Sobic002G284901 Sobic002G284901 Sobic002G263900--Sobic002G284901 Sobic006G065700 Sobic006G065700 Sobic002G263900--Sobic006G065700 Sobic010G074980 Sobic010G074980 Sobic002G263900--Sobic010G074980 Sobic001G519300 Sobic001G519300 Sobic002G263900--Sobic001G519300 Sobic003G120400 Sobic003G120400 Sobic002G263900--Sobic003G120400 Sobic007G093400 Sobic007G093400 Sobic002G263900--Sobic007G093400 Sobic010G073300--Sobic002G284901 Sobic010G073300--Sobic003G120400 Sobic001G525000 Sobic001G525000 Sobic010G073300--Sobic001G525000 Sobic010G073300--Sobic002G320900 Sobic002G430200 Sobic002G430200 Sobic010G073300--Sobic002G430200 Sobic001G130900 Sobic001G130900 Sobic010G073300--Sobic001G130900 Sobic003G200501 Sobic003G200501 Sobic010G073300--Sobic003G200501 Sobic002G387100 Sobic002G387100 Sobic010G073300--Sobic002G387100 Sobic002G210200 Sobic002G210200 Sobic010G073300--Sobic002G210200 Sobic002G320900--Sobic002G284901 Sobic002G320900--Sobic001G525000 Sobic002G320900--Sobic003G120400 Sobic002G320900--Sobic002G210200 Sobic002G320900--Sobic003G200501 Sobic002G320900--Sobic007G093400 Sobic002G320900--Sobic006G065700 Sobic001G460800 Sobic001G460800 Sobic002G320900--Sobic001G460800 Sobic003G367401 Sobic003G367401 Sobic002G320900--Sobic003G367401 Sobic007G224600--Sobic001G519300 Sobic007G224600--Sobic002G320900 Sobic007G224600--Sobic002G284901 Sobic007G221800 Sobic007G221800 Sobic007G224600--Sobic007G221800 Sobic007G224600--Sobic002G210200 Sobic007G224600--Sobic001G130900 Sobic007G224600--Sobic003G200501 Sobic007G224600--Sobic007G093400 Sobic007G224600--Sobic006G065700 Sobic002G284901--Sobic002G320900 Sobic002G284901--Sobic003G200501 Sobic002G284901--Sobic002G210200 Sobic002G284901--Sobic003G120400 Sobic002G284901--Sobic001G525000 Sobic002G284901--Sobic007G093400 Sobic002G284901--Sobic006G065700 Sobic003G067500 Sobic003G067500 Sobic002G284901--Sobic003G067500 Sobic002G284901--Sobic002G430200 Sobic006G065700--Sobic002G320900 Sobic006G065700--Sobic002G284901 Sobic006G065700--Sobic007G093400 Sobic006G065700--Sobic002G210200 Sobic006G065700--Sobic003G200501 Sobic006G065700--Sobic003G120400 Sobic006G065700--Sobic001G525000 Sobic006G065700--Sobic010G074980 Sobic003G427500 Sobic003G427500 Sobic006G065700--Sobic003G427500 Sobic010G201000 Sobic010G201000 Sobic010G074980--Sobic010G201000 Sobic010G074980--Sobic007G093400 Sobic004G082151 Sobic004G082151 Sobic010G074980--Sobic004G082151 Sobic010G074980--Sobic003G427500 Sobic010G074980--Sobic006G065700 Sobic010G074980--Sobic003G120400 Sobic010G074980--Sobic001G525000 Sobic010G074980--Sobic002G320900 Sobic010G074980--Sobic003G367401 Sobic001G519300--Sobic007G224600 Sobic001G519300--Sobic002G320900 Sobic001G519300--Sobic002G284901 Sobic001G223400 Sobic001G223400 Sobic001G519300--Sobic001G223400 Sobic001G519300--Sobic006G065700 Sobic001G519300--Sobic007G221800 Sobic001G519300--Sobic002G210200 Sobic001G519300--Sobic003G200501 Sobic001G519300--Sobic003G120400 Sobic003G120400--Sobic001G525000 Sobic003G120400--Sobic002G320900 Sobic003G120400--Sobic007G093400 Sobic003G120400--Sobic002G284901 Sobic003G120400--Sobic003G200501 Sobic003G120400--Sobic002G210200 Sobic003G120400--Sobic001G130900 Sobic003G120400--Sobic002G430200 Sobic003G120400--Sobic003G367401 Sobic007G093400--Sobic003G120400 Sobic007G093400--Sobic002G320900 Sobic007G093400--Sobic001G525000 Sobic007G093400--Sobic010G201000 Sobic007G093400--Sobic003G367401 Sobic003G065001 Sobic003G065001 Sobic007G093400--Sobic003G065001 Sobic007G093400--Sobic002G210200 Sobic007G093400--Sobic003G200501 Sobic007G093400--Sobic010G074980
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.