Gene annotation
Transcriptome id Sobic.003G149500.1
Synonym UXS2, ATUXS2, AUD1, Sb03g012980
Functional annotation NAD dependent epimerase/dehydratase family domain containing protein, expressed
UniProt C5XIV5
Pfam PF01073
Panther DB PTHR10366 PTHR10366:SF379
NCBI CDD -
KEGG Orthology K08678; UXS1, UDP-glucuronate decarboxylase
Gene Ontology GO:0016616; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0006694steroid biosynthetic process GO:00038543-beta-hydroxy-delta5-steroid dehydrogenase activity


Orthologs (automatic annotation)
TAIR AT2G47650 : UDP-xylose synthase 4
RAP-DB (Rice) LOC_Os01g21320.1 : NAD dependent epimerase/dehydratase family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a036976 , Zm00025a024344 , Zm00025a043361
Brachypodium KQK10481 , KQK14679 , KQK04145 , KQK06698
Barley HORVU1Hr1G058810.11 , HORVU1Hr1G058810.10 , HORVU1Hr1G058810.9 , HORVU1Hr1G058810.5 , HORVU1Hr1G058810.4 , HORVU1Hr1G058810.7 , HORVU1Hr1G058810.6 , HORVU1Hr1G058810.1 , HORVU1Hr1G058810.3 , HORVU1Hr1G058810.2 , HORVU2Hr1G019180.1 , HORVU1Hr1G058810.8 , HORVU3Hr1G087000.1 , HORVU3Hr1G087000.3 , HORVU3Hr1G087000.6 , HORVU2Hr1G019180.3 , HORVU2Hr1G019180.2 , HORVU3Hr1G087000.4 , HORVU3Hr1G087000.5 , HORVU3Hr1G087000.7
Wheat TraesCS1D02G231600 , TraesCS3D02G349200 , TraesCS1B02G243800 , TraesCS1B02G243800 , TraesCS3B02G388100 , TraesCS1A02G230400 , TraesCS3A02G355200
Populus PNT32887 , PNT32886


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cDNA sequences
Sobic.003G149500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G065001 - -
2 Sobic.003G367401 - -
3 Sobic.007G093400 - -
4 Sobic.009G198400 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
5 Sobic.002G320900 patatin-like phospholipase family protein, expressed -
6 Sobic.010G201000 - -
7 Sobic.002G210200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
8 Sobic.002G284901 - -
9 Sobic.006G069050 - -
10 Sobic.003G120400 expressed protein -
11 Sobic.003G200501 - K11252: histone H2B
12 Sobic.001G525000 polygalacturonase, putative, expressed -
13 Sobic.003G126400 expressed protein -
14 Sobic.001G130900 expressed protein -
15 Sobic.003G067500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
16 Sobic.002G430200 PSF2 - Putative GINS complex subunit, expressed K10733: GINS2, GINS complex subunit 2
17 Sobic.006G065700 DUF677 domain containing protein, putative, expressed -
18 Sobic.010G074980 - -
19 Sobic.001G115900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
20 Sobic.009G152901 - -


Gene co-expression network
sample Sobic003G149500 Sobic003G149500 Sobic003G065001 Sobic003G065001 Sobic003G149500--Sobic003G065001 Sobic003G367401 Sobic003G367401 Sobic003G149500--Sobic003G367401 Sobic007G093400 Sobic007G093400 Sobic003G149500--Sobic007G093400 Sobic009G198400 Sobic009G198400 Sobic003G149500--Sobic009G198400 Sobic002G320900 Sobic002G320900 Sobic003G149500--Sobic002G320900 Sobic010G201000 Sobic010G201000 Sobic003G149500--Sobic010G201000 Sobic002G210200 Sobic002G210200 Sobic003G149500--Sobic002G210200 Sobic002G284901 Sobic002G284901 Sobic003G149500--Sobic002G284901 Sobic006G069050 Sobic006G069050 Sobic003G149500--Sobic006G069050 Sobic003G065001--Sobic007G093400 Sobic003G065001--Sobic003G367401 Sobic003G065001--Sobic010G201000 Sobic003G065001--Sobic002G320900 Sobic003G065001--Sobic002G210200 Sobic001G525000 Sobic001G525000 Sobic003G065001--Sobic001G525000 Sobic003G200501 Sobic003G200501 Sobic003G065001--Sobic003G200501 Sobic003G120400 Sobic003G120400 Sobic003G065001--Sobic003G120400 Sobic010G074980 Sobic010G074980 Sobic003G065001--Sobic010G074980 Sobic002G430200 Sobic002G430200 Sobic003G367401--Sobic002G430200 Sobic003G367401--Sobic010G201000 Sobic003G367401--Sobic001G525000 Sobic002G387100 Sobic002G387100 Sobic003G367401--Sobic002G387100 Sobic007G122300 Sobic007G122300 Sobic003G367401--Sobic007G122300 Sobic003G367401--Sobic007G093400 Sobic004G239000 Sobic004G239000 Sobic003G367401--Sobic004G239000 Sobic001G016900 Sobic001G016900 Sobic003G367401--Sobic001G016900 Sobic003G367401--Sobic003G120400 Sobic007G093400--Sobic003G120400 Sobic007G093400--Sobic002G320900 Sobic007G093400--Sobic001G525000 Sobic007G093400--Sobic010G201000 Sobic007G093400--Sobic003G367401 Sobic007G093400--Sobic003G065001 Sobic007G093400--Sobic002G210200 Sobic007G093400--Sobic003G200501 Sobic007G093400--Sobic010G074980 Sobic007G175701 Sobic007G175701 Sobic009G198400--Sobic007G175701 Sobic001G130900 Sobic001G130900 Sobic009G198400--Sobic001G130900 Sobic009G198400--Sobic007G093400 Sobic009G198400--Sobic003G367401 Sobic001G213400 Sobic001G213400 Sobic009G198400--Sobic001G213400 Sobic009G198400--Sobic003G065001 Sobic001G115900 Sobic001G115900 Sobic009G198400--Sobic001G115900 Sobic009G198400--Sobic003G120400 Sobic003G126400 Sobic003G126400 Sobic009G198400--Sobic003G126400 Sobic002G320900--Sobic002G284901 Sobic002G320900--Sobic001G525000 Sobic002G320900--Sobic003G120400 Sobic002G320900--Sobic002G210200 Sobic002G320900--Sobic003G200501 Sobic002G320900--Sobic007G093400 Sobic006G065700 Sobic006G065700 Sobic002G320900--Sobic006G065700 Sobic001G460800 Sobic001G460800 Sobic002G320900--Sobic001G460800 Sobic002G320900--Sobic003G367401 Sobic010G201000--Sobic003G367401 Sobic010G201000--Sobic007G093400 Sobic010G201000--Sobic002G430200 Sobic010G201000--Sobic010G074980 Sobic010G201000--Sobic001G525000 Sobic010G201000--Sobic002G387100 Sobic010G201000--Sobic003G120400 Sobic010G201000--Sobic001G016900 Sobic003G099500 Sobic003G099500 Sobic010G201000--Sobic003G099500 Sobic002G210200--Sobic003G200501 Sobic003G067500 Sobic003G067500 Sobic002G210200--Sobic003G067500 Sobic002G210200--Sobic002G320900 Sobic002G210200--Sobic002G284901 Sobic002G210200--Sobic001G525000 Sobic002G210200--Sobic003G120400 Sobic002G210200--Sobic007G093400 Sobic003G067300 Sobic003G067300 Sobic002G210200--Sobic003G067300 Sobic007G221800 Sobic007G221800 Sobic002G210200--Sobic007G221800 Sobic002G284901--Sobic002G320900 Sobic002G284901--Sobic003G200501 Sobic002G284901--Sobic002G210200 Sobic002G284901--Sobic003G120400 Sobic002G284901--Sobic001G525000 Sobic002G284901--Sobic007G093400 Sobic002G284901--Sobic006G065700 Sobic002G284901--Sobic003G067500 Sobic002G284901--Sobic002G430200 Sobic006G069050--Sobic003G126400 Sobic003G038300 Sobic003G038300 Sobic006G069050--Sobic003G038300 Sobic004G152501 Sobic004G152501 Sobic006G069050--Sobic004G152501 Sobic006G069050--Sobic001G115900 Sobic006G069050--Sobic003G065001 Sobic006G058300 Sobic006G058300 Sobic006G069050--Sobic006G058300 Sobic006G069050--Sobic010G201000 Sobic003G167825 Sobic003G167825 Sobic006G069050--Sobic003G167825 Sobic006G069050--Sobic010G074980
Octagon: transcription factors


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