Gene annotation
Transcriptome id Sobic.006G278500.1,Sobic.006G278500.2
Synonym Sb06g033930
Functional annotation class I glutamine amidotransferase, putative, expressed
UniProt C5YB33
Pfam PF07722 PF00958
Panther DB PTHR11922 PTHR11922:SF2
NCBI CDD -
KEGG Orthology K01951; guaA, GMP synthase (glutamine-hydrolysing)
Gene Ontology GO:0016787; hydrolase activity GO:0006541glutamine metabolic process GO:0006177GMP biosynthetic process GO:0006164purine nucleotide biosynthetic process GO:0005524ATP binding GO:0003922GMP synthase (glutamine-hydrolyzing) activity


Orthologs (automatic annotation)
TAIR AT1G63660 : GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative
RAP-DB (Rice) LOC_Os08g23730.1 : class I glutamine amidotransferase, putative, expressed
MaizeGDB (Corn) Zm00025a057485
Brachypodium KQJ96040
Barley HORVU7Hr1G021590.2 , HORVU7Hr1G021590.1 , HORVU6Hr1G009430.4 , HORVU6Hr1G009430.5 , HORVU6Hr1G009430.2 , HORVU6Hr1G009430.3 , HORVU6Hr1G009430.1
Wheat TraesCS3A02G255800 , TraesCS1D02G255000 , TraesCS1B02G266400 , TraesCS6A02G047100 , TraesCS1A02G255700 , TraesCS6D02G054300 , TraesCS6D02G054300 , TraesCS6B02G063300 , TraesCS3B02G288500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G179100 protein binding protein, putative, expressed K12821: PRPF40, pre-mRNA-processing factor 40
2 Sobic.002G430200 PSF2 - Putative GINS complex subunit, expressed K10733: GINS2, GINS complex subunit 2
3 Sobic.002G387100 X8 domain containing protein, expressed -
4 Sobic.007G122300 - -
5 Sobic.010G073300 expressed protein -
6 Sobic.001G213400 HD domain containing protein 2, putative, expressed K06950: uncharacterized protein
7 Sobic.002G284800 expressed protein -
8 Sobic.002G284901 - -
9 Sobic.003G368150 - -
10 Sobic.003G120400 expressed protein -
11 Sobic.004G239000 - -
12 Sobic.003G367401 - -
13 Sobic.001G130900 expressed protein -
14 Sobic.001G525000 polygalacturonase, putative, expressed -
15 Sobic.003G099500 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
16 Sobic.004G330400 expressed protein -
17 Sobic.008G131800 zinc knuckle family protein, expressed -
18 Sobic.002G425900 expressed protein -
19 Sobic.001G255700 - -
20 Sobic.K044200 - -


Gene co-expression network
sample Sobic006G278500 Sobic006G278500 Sobic003G179100 Sobic003G179100 Sobic006G278500--Sobic003G179100 Sobic002G430200 Sobic002G430200 Sobic006G278500--Sobic002G430200 Sobic002G387100 Sobic002G387100 Sobic006G278500--Sobic002G387100 Sobic007G122300 Sobic007G122300 Sobic006G278500--Sobic007G122300 Sobic010G073300 Sobic010G073300 Sobic006G278500--Sobic010G073300 Sobic001G213400 Sobic001G213400 Sobic006G278500--Sobic001G213400 Sobic002G284800 Sobic002G284800 Sobic006G278500--Sobic002G284800 Sobic002G284901 Sobic002G284901 Sobic006G278500--Sobic002G284901 Sobic003G368150 Sobic003G368150 Sobic006G278500--Sobic003G368150 Sobic003G179100--Sobic010G073300 Sobic003G179100--Sobic002G284901 Sobic002G320900 Sobic002G320900 Sobic003G179100--Sobic002G320900 Sobic003G120400 Sobic003G120400 Sobic003G179100--Sobic003G120400 Sobic001G525000 Sobic001G525000 Sobic003G179100--Sobic001G525000 Sobic006G065700 Sobic006G065700 Sobic003G179100--Sobic006G065700 Sobic003G179100--Sobic002G430200 Sobic003G179100--Sobic002G387100 Sobic001G519300 Sobic001G519300 Sobic003G179100--Sobic001G519300 Sobic002G430200--Sobic002G387100 Sobic002G430200--Sobic007G122300 Sobic003G099500 Sobic003G099500 Sobic002G430200--Sobic003G099500 Sobic003G367401 Sobic003G367401 Sobic002G430200--Sobic003G367401 Sobic002G430200--Sobic001G525000 Sobic004G239000 Sobic004G239000 Sobic002G430200--Sobic004G239000 Sobic002G430200--Sobic003G120400 Sobic010G201000 Sobic010G201000 Sobic002G430200--Sobic010G201000 Sobic002G430200--Sobic002G284800 Sobic002G387100--Sobic002G430200 Sobic002G387100--Sobic007G122300 Sobic002G387100--Sobic003G099500 Sobic002G387100--Sobic004G239000 Sobic002G387100--Sobic001G525000 Sobic002G387100--Sobic003G367401 Sobic002G387100--Sobic002G284800 Sobic002G387100--Sobic003G368150 Sobic002G387100--Sobic003G120400 Sobic007G122300--Sobic002G430200 Sobic007G122300--Sobic002G387100 Sobic007G122300--Sobic003G368150 Sobic007G122300--Sobic004G239000 Sobic007G122300--Sobic003G099500 Sobic007G122300--Sobic003G367401 Sobic008G131800 Sobic008G131800 Sobic007G122300--Sobic008G131800 Sobic007G122300--Sobic002G284800 Sobic001G441800 Sobic001G441800 Sobic007G122300--Sobic001G441800 Sobic010G073300--Sobic002G284901 Sobic010G073300--Sobic003G120400 Sobic010G073300--Sobic001G525000 Sobic010G073300--Sobic002G320900 Sobic010G073300--Sobic002G430200 Sobic001G130900 Sobic001G130900 Sobic010G073300--Sobic001G130900 Sobic003G200501 Sobic003G200501 Sobic010G073300--Sobic003G200501 Sobic010G073300--Sobic002G387100 Sobic002G210200 Sobic002G210200 Sobic010G073300--Sobic002G210200 Sobic001G213400--Sobic007G122300 Sobic007G175701 Sobic007G175701 Sobic001G213400--Sobic007G175701 Sobic001G213400--Sobic001G130900 Sobic001G213400--Sobic003G368150 Sobic001G213400--Sobic003G367401 Sobic001G213400--Sobic002G430200 Sobic001G213400--Sobic002G387100 Sobic001G213400--Sobic008G131800 Sobic001G213400--Sobic004G239000 Sobic002G284800--Sobic003G368150 Sobic001G255700 Sobic001G255700 Sobic002G284800--Sobic001G255700 Sobic002G284800--Sobic004G239000 Sobic002G284800--Sobic008G131800 Sobic008G133100 Sobic008G133100 Sobic002G284800--Sobic008G133100 Sobic002G284800--Sobic003G099500 Sobic002G284800--Sobic002G387100 Sobic002G284800--Sobic007G122300 Sobic003G105300 Sobic003G105300 Sobic002G284800--Sobic003G105300 Sobic002G284901--Sobic002G320900 Sobic002G284901--Sobic003G200501 Sobic002G284901--Sobic002G210200 Sobic002G284901--Sobic003G120400 Sobic002G284901--Sobic001G525000 Sobic007G093400 Sobic007G093400 Sobic002G284901--Sobic007G093400 Sobic002G284901--Sobic006G065700 Sobic003G067500 Sobic003G067500 Sobic002G284901--Sobic003G067500 Sobic002G284901--Sobic002G430200 Sobic003G368150--Sobic002G284800 Sobic003G368150--Sobic001G255700 Sobic003G368150--Sobic008G131800 Sobic003G368150--Sobic007G122300 Sobic003G368150--Sobic004G239000 Sobic003G368150--Sobic008G133100 Sobic003G368150--Sobic002G387100 Sobic004G197300 Sobic004G197300 Sobic003G368150--Sobic004G197300 Sobic003G368150--Sobic003G099500
Octagon: transcription factors


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