Gene annotation
Transcriptome id Sobic.007G106400.1,Sobic.007G106400.2
Synonym ATMBF1A, MBF1A, Sb07g014940
Functional annotation endothelial differentiation-related factor 1, putative, expressed
UniProt C5YK78
Pfam PF01381 PF08523
Panther DB PTHR10245 PTHR10245:SF33
NCBI CDD KOG3398; Transcription factor MBF1
KEGG Orthology K03627; putative transcription factor
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G42680 : multiprotein bridging factor 1A
RAP-DB (Rice) LOC_Os08g27850.1 : endothelial differentiation-related factor 1, putative, expressed
MaizeGDB (Corn) Zm00025a006175 , Zm00025a029859
Brachypodium KQJ96229
Barley HORVU2Hr1G092600.1 , HORVU2Hr1G092600.3 , HORVU2Hr1G092600.2 , HORVU2Hr1G092600.4
Wheat TraesCS2D02G386800 , TraesCS2A02G389000 , TraesCS2B02G407000
Populus PNT59095 , PNT59094 , PNT59093 , PNT59092 , PNT59091 , PNT12837


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cDNA sequences
Sobic.007G106400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G013500 expressed protein -
2 Sobic.009G255300 OsClp8 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
3 Sobic.001G543500 "generic sugar transporter, up-regulated under drought stress "(PubMedID : 24655390)@Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@transporter family protein, putative, expressed -
4 Sobic.001G429100 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
5 Sobic.003G359800 MYB family transcription factor, putative, expressed -
6 Sobic.005G005500 macrophage migration inhibitory factor, putative, expressed -
7 Sobic.008G139900 expressed protein -
8 Sobic.004G033900 expressed protein -
9 Sobic.002G293900 mitochondrial glycoprotein, putative, expressed -
10 Sobic.002G199100 peptidyl-prolyl cis-trans isomerase, putative, expressed K09579: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4
11 Sobic.004G072000 ribosome, putative, expressed -
12 Sobic.006G278500 class I glutamine amidotransferase, putative, expressed K01951: guaA, GMP synthase (glutamine-hydrolysing)
13 Sobic.008G028500 expressed protein -
14 Sobic.002G276700 protein of unknown function containing protein, expressed -
15 Sobic.004G192700 dynein light chain type 1 family protein, putative, expressed K10418: dynein light chain LC8-type
16 Sobic.010G258100 ZOS6-10 - C2H2 zinc finger protein, expressed -
17 Sobic.006G118000 expressed protein -
18 Sobic.004G330400 expressed protein -
19 Sobic.K044200 - -
20 Sobic.004G134500 expressed protein -


Gene co-expression network
sample Sobic007G106400 Sobic007G106400 Sobic007G013500 Sobic007G013500 Sobic007G106400--Sobic007G013500 Sobic009G255300 Sobic009G255300 Sobic007G106400--Sobic009G255300 Sobic001G543500 Sobic001G543500 Sobic007G106400--Sobic001G543500 Sobic001G429100 Sobic001G429100 Sobic007G106400--Sobic001G429100 Sobic003G359800 Sobic003G359800 Sobic007G106400--Sobic003G359800 Sobic005G005500 Sobic005G005500 Sobic007G106400--Sobic005G005500 Sobic008G139900 Sobic008G139900 Sobic007G106400--Sobic008G139900 Sobic004G033900 Sobic004G033900 Sobic007G106400--Sobic004G033900 Sobic002G293900 Sobic002G293900 Sobic007G106400--Sobic002G293900 Sobic003G179100 Sobic003G179100 Sobic007G013500--Sobic003G179100 Sobic001G115800 Sobic001G115800 Sobic007G013500--Sobic001G115800 Sobic010G073300 Sobic010G073300 Sobic007G013500--Sobic010G073300 Sobic007G013500--Sobic009G255300 Sobic006G278500 Sobic006G278500 Sobic007G013500--Sobic006G278500 Sobic004G192700 Sobic004G192700 Sobic007G013500--Sobic004G192700 Sobic006G139600 Sobic006G139600 Sobic007G013500--Sobic006G139600 Sobic001G519300 Sobic001G519300 Sobic007G013500--Sobic001G519300 Sobic004G275500 Sobic004G275500 Sobic007G013500--Sobic004G275500 Sobic009G255300--Sobic003G179100 Sobic009G255300--Sobic007G013500 Sobic009G255300--Sobic006G278500 Sobic010G036000 Sobic010G036000 Sobic009G255300--Sobic010G036000 Sobic002G285300 Sobic002G285300 Sobic009G255300--Sobic002G285300 Sobic004G072000 Sobic004G072000 Sobic009G255300--Sobic004G072000 Sobic009G255300--Sobic010G073300 Sobic003G440400 Sobic003G440400 Sobic009G255300--Sobic003G440400 Sobic009G255300--Sobic008G139900 Sobic002G088200 Sobic002G088200 Sobic001G543500--Sobic002G088200 Sobic001G543500--Sobic004G072000 Sobic001G543500--Sobic008G139900 Sobic001G516800 Sobic001G516800 Sobic001G543500--Sobic001G516800 Sobic010G208000 Sobic010G208000 Sobic001G543500--Sobic010G208000 Sobic004G034500 Sobic004G034500 Sobic001G543500--Sobic004G034500 Sobic001G543500--Sobic004G033900 Sobic001G543500--Sobic005G005500 Sobic002G314200 Sobic002G314200 Sobic001G543500--Sobic002G314200 Sobic002G276700 Sobic002G276700 Sobic001G429100--Sobic002G276700 Sobic001G429100--Sobic004G192700 Sobic002G056300 Sobic002G056300 Sobic001G429100--Sobic002G056300 Sobic001G441800 Sobic001G441800 Sobic001G429100--Sobic001G441800 Sobic003G350100 Sobic003G350100 Sobic001G429100--Sobic003G350100 Sobic001G200500 Sobic001G200500 Sobic001G429100--Sobic001G200500 Sobic004G227000 Sobic004G227000 Sobic001G429100--Sobic004G227000 Sobic008G133100 Sobic008G133100 Sobic001G429100--Sobic008G133100 Sobic004G265400 Sobic004G265400 Sobic001G429100--Sobic004G265400 Sobic003G359800--Sobic009G255300 Sobic003G359800--Sobic001G543500 Sobic003G359800--Sobic007G106400 Sobic004G284400 Sobic004G284400 Sobic003G359800--Sobic004G284400 Sobic003G359800--Sobic010G036000 Sobic003G359800--Sobic007G013500 Sobic003G264700 Sobic003G264700 Sobic003G359800--Sobic003G264700 Sobic003G359800--Sobic008G139900 Sobic002G186600 Sobic002G186600 Sobic003G359800--Sobic002G186600 Sobic005G005500--Sobic008G139900 Sobic005G005500--Sobic004G072000 Sobic006G204000 Sobic006G204000 Sobic005G005500--Sobic006G204000 Sobic003G229150 Sobic003G229150 Sobic005G005500--Sobic003G229150 Sobic004G330400 Sobic004G330400 Sobic005G005500--Sobic004G330400 Sobic010G244600 Sobic010G244600 Sobic005G005500--Sobic010G244600 Sobic005G005500--Sobic002G186600 Sobic005G102100 Sobic005G102100 Sobic005G005500--Sobic005G102100 Sobic005G005500--Sobic001G543500 Sobic008G139900--Sobic004G330400 Sobic001G493800 Sobic001G493800 Sobic008G139900--Sobic001G493800 SobicK044200 SobicK044200 Sobic008G139900--SobicK044200 Sobic008G028500 Sobic008G028500 Sobic008G139900--Sobic008G028500 Sobic008G139900--Sobic003G229150 Sobic008G139900--Sobic005G102100 Sobic002G206200 Sobic002G206200 Sobic008G139900--Sobic002G206200 Sobic008G139900--Sobic006G204000 Sobic003G396900 Sobic003G396900 Sobic008G139900--Sobic003G396900 Sobic004G033900--Sobic002G088200 Sobic004G033900--Sobic004G034500 Sobic004G033900--Sobic001G543500 Sobic005G052000 Sobic005G052000 Sobic004G033900--Sobic005G052000 Sobic004G033900--Sobic001G516800 Sobic010G108500 Sobic010G108500 Sobic004G033900--Sobic010G108500 Sobic001G310800 Sobic001G310800 Sobic004G033900--Sobic001G310800 Sobic010G082800 Sobic010G082800 Sobic004G033900--Sobic010G082800 Sobic006G118000 Sobic006G118000 Sobic004G033900--Sobic006G118000 Sobic002G293900--Sobic008G028500 Sobic002G293900--Sobic002G276700 Sobic002G293900--Sobic001G429100 Sobic005G232000 Sobic005G232000 Sobic002G293900--Sobic005G232000 Sobic002G293900--SobicK044200 Sobic010G189800 Sobic010G189800 Sobic002G293900--Sobic010G189800 Sobic009G154000 Sobic009G154000 Sobic002G293900--Sobic009G154000 Sobic010G114500 Sobic010G114500 Sobic002G293900--Sobic010G114500 Sobic002G293900--Sobic007G013500
Octagon: transcription factors


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