Gene annotation
Transcriptome id Sobic.003G359800.1
Synonym Sb03g040160
Functional annotation MYB family transcription factor, putative, expressed
UniProt A0A1B6Q723
Pfam PF00249
Panther DB PTHR24078 PTHR24078:SF279
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38090 : Duplicated homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os01g63460.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a023494 , Zm00025a026745 , Zm00025a039576 , Zm00025a043800 , Zm00025a035798 , Zm00025a037205 , Zm00025a039619 , Zm00025a043782 , Zm00025a026822 , Zm00025a035598
Brachypodium KQK02637 , KQK05980 , KQK10627 , KQK10731 , PNT71169
Barley HORVU1Hr1G073300.2 , HORVU1Hr1G073300.3 , HORVU1Hr1G073300.1 , HORVU1Hr1G073940.1 , HORVU1Hr1G073940.2 , HORVU1Hr1G073940.3 , HORVU1Hr1G073940.4 , HORVU1Hr1G073940.5 , HORVU1Hr1G073940.6 , HORVU3Hr1G010600.2 , HORVU3Hr1G010600.3 , HORVU3Hr1G010600.1 , HORVU3Hr1G083740.3 , HORVU3Hr1G083740.2 , HORVU3Hr1G083740.1 , HORVU3Hr1G083740.5 , HORVU3Hr1G083740.4 , HORVU3Hr1G085180.3 , HORVU3Hr1G085180.1 , HORVU0Hr1G018970.2 , HORVU0Hr1G018970.1
Wheat TraesCS3A02G375500 , TraesCS3D02G056100 , TraesCS3D02G360500 , TraesCS7A02G036100 , TraesCS3B02G068800 , TraesCS1A02G278900 , TraesCS3A02G056000 , TraesCS1D02G278200 , TraesCS3A02G056100 , TraesCS3D02G368000 , TraesCS3A02G367600 , TraesCS3B02G068900 , TraesCS1B02G287700 , TraesCS3B02G407700 , TraesCS3D02G056200 , TraesCS7D02G032700 , TraesCS4A02G452600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G255300 OsClp8 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
2 Sobic.001G543500 "generic sugar transporter, up-regulated under drought stress "(PubMedID : 24655390)@Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@transporter family protein, putative, expressed -
3 Sobic.007G106400 endothelial differentiation-related factor 1, putative, expressed K03627: putative transcription factor
4 Sobic.004G284400 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
5 Sobic.010G036000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.007G013500 expressed protein -
7 Sobic.003G264700 expressed protein -
8 Sobic.008G139900 expressed protein -
9 Sobic.002G186600 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed -
10 Sobic.006G278500 class I glutamine amidotransferase, putative, expressed K01951: guaA, GMP synthase (glutamine-hydrolysing)
11 Sobic.004G072000 ribosome, putative, expressed -
12 Sobic.002G285300 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsSAUR53 - Auxin-responsive SAUR gene family member, expressed -
13 Sobic.005G005500 macrophage migration inhibitory factor, putative, expressed -
14 Sobic.010G057000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCML30 - Calmodulin-related calcium sensor protein, expressed -
15 Sobic.003G179100 protein binding protein, putative, expressed K12821: PRPF40, pre-mRNA-processing factor 40
16 Sobic.004G330400 expressed protein -
17 Sobic.001G004000 avr9/Cf-9 rapidly elicited protein, putative, expressed -
18 Sobic.008G028500 expressed protein -
19 Sobic.010G244600 nifU, putative, expressed -
20 Sobic.006G157300 expressed protein -


Gene co-expression network
sample Sobic003G359800 Sobic003G359800 Sobic009G255300 Sobic009G255300 Sobic003G359800--Sobic009G255300 Sobic001G543500 Sobic001G543500 Sobic003G359800--Sobic001G543500 Sobic007G106400 Sobic007G106400 Sobic003G359800--Sobic007G106400 Sobic004G284400 Sobic004G284400 Sobic003G359800--Sobic004G284400 Sobic010G036000 Sobic010G036000 Sobic003G359800--Sobic010G036000 Sobic007G013500 Sobic007G013500 Sobic003G359800--Sobic007G013500 Sobic003G264700 Sobic003G264700 Sobic003G359800--Sobic003G264700 Sobic008G139900 Sobic008G139900 Sobic003G359800--Sobic008G139900 Sobic002G186600 Sobic002G186600 Sobic003G359800--Sobic002G186600 Sobic003G179100 Sobic003G179100 Sobic009G255300--Sobic003G179100 Sobic009G255300--Sobic007G013500 Sobic006G278500 Sobic006G278500 Sobic009G255300--Sobic006G278500 Sobic009G255300--Sobic010G036000 Sobic002G285300 Sobic002G285300 Sobic009G255300--Sobic002G285300 Sobic004G072000 Sobic004G072000 Sobic009G255300--Sobic004G072000 Sobic010G073300 Sobic010G073300 Sobic009G255300--Sobic010G073300 Sobic003G440400 Sobic003G440400 Sobic009G255300--Sobic003G440400 Sobic009G255300--Sobic008G139900 Sobic002G088200 Sobic002G088200 Sobic001G543500--Sobic002G088200 Sobic001G543500--Sobic004G072000 Sobic001G543500--Sobic008G139900 Sobic001G516800 Sobic001G516800 Sobic001G543500--Sobic001G516800 Sobic010G208000 Sobic010G208000 Sobic001G543500--Sobic010G208000 Sobic004G034500 Sobic004G034500 Sobic001G543500--Sobic004G034500 Sobic004G033900 Sobic004G033900 Sobic001G543500--Sobic004G033900 Sobic005G005500 Sobic005G005500 Sobic001G543500--Sobic005G005500 Sobic002G314200 Sobic002G314200 Sobic001G543500--Sobic002G314200 Sobic007G106400--Sobic007G013500 Sobic007G106400--Sobic009G255300 Sobic007G106400--Sobic001G543500 Sobic001G429100 Sobic001G429100 Sobic007G106400--Sobic001G429100 Sobic007G106400--Sobic003G359800 Sobic007G106400--Sobic005G005500 Sobic007G106400--Sobic008G139900 Sobic007G106400--Sobic004G033900 Sobic002G293900 Sobic002G293900 Sobic007G106400--Sobic002G293900 Sobic004G284400--Sobic002G285300 Sobic004G230900 Sobic004G230900 Sobic004G284400--Sobic004G230900 Sobic008G061000 Sobic008G061000 Sobic004G284400--Sobic008G061000 Sobic009G154000 Sobic009G154000 Sobic004G284400--Sobic009G154000 Sobic004G128600 Sobic004G128600 Sobic004G284400--Sobic004G128600 Sobic001G200500 Sobic001G200500 Sobic004G284400--Sobic001G200500 Sobic005G102100 Sobic005G102100 Sobic004G284400--Sobic005G102100 Sobic001G193400 Sobic001G193400 Sobic004G284400--Sobic001G193400 Sobic008G133100 Sobic008G133100 Sobic004G284400--Sobic008G133100 Sobic010G036000--Sobic003G179100 Sobic002G284901 Sobic002G284901 Sobic010G036000--Sobic002G284901 Sobic010G036000--Sobic010G073300 Sobic001G525000 Sobic001G525000 Sobic010G036000--Sobic001G525000 Sobic002G430200 Sobic002G430200 Sobic010G036000--Sobic002G430200 Sobic003G120400 Sobic003G120400 Sobic010G036000--Sobic003G120400 Sobic002G387100 Sobic002G387100 Sobic010G036000--Sobic002G387100 Sobic002G320900 Sobic002G320900 Sobic010G036000--Sobic002G320900 Sobic006G065700 Sobic006G065700 Sobic010G036000--Sobic006G065700 Sobic007G013500--Sobic003G179100 Sobic001G115800 Sobic001G115800 Sobic007G013500--Sobic001G115800 Sobic007G013500--Sobic010G073300 Sobic007G013500--Sobic009G255300 Sobic007G013500--Sobic006G278500 Sobic004G192700 Sobic004G192700 Sobic007G013500--Sobic004G192700 Sobic006G139600 Sobic006G139600 Sobic007G013500--Sobic006G139600 Sobic001G519300 Sobic001G519300 Sobic007G013500--Sobic001G519300 Sobic004G275500 Sobic004G275500 Sobic007G013500--Sobic004G275500 Sobic004G023400 Sobic004G023400 Sobic003G264700--Sobic004G023400 Sobic004G204500 Sobic004G204500 Sobic003G264700--Sobic004G204500 Sobic007G204400 Sobic007G204400 Sobic003G264700--Sobic007G204400 Sobic003G264700--Sobic002G088200 Sobic003G309700 Sobic003G309700 Sobic003G264700--Sobic003G309700 Sobic009G237800 Sobic009G237800 Sobic003G264700--Sobic009G237800 Sobic010G042400 Sobic010G042400 Sobic003G264700--Sobic010G042400 Sobic001G381900 Sobic001G381900 Sobic003G264700--Sobic001G381900 Sobic003G264700--Sobic001G543500 Sobic004G330400 Sobic004G330400 Sobic008G139900--Sobic004G330400 Sobic001G493800 Sobic001G493800 Sobic008G139900--Sobic001G493800 SobicK044200 SobicK044200 Sobic008G139900--SobicK044200 Sobic008G028500 Sobic008G028500 Sobic008G139900--Sobic008G028500 Sobic003G229150 Sobic003G229150 Sobic008G139900--Sobic003G229150 Sobic008G139900--Sobic005G102100 Sobic002G206200 Sobic002G206200 Sobic008G139900--Sobic002G206200 Sobic006G204000 Sobic006G204000 Sobic008G139900--Sobic006G204000 Sobic003G396900 Sobic003G396900 Sobic008G139900--Sobic003G396900 Sobic002G186600--Sobic008G139900 Sobic002G186600--Sobic004G330400 Sobic002G186600--Sobic003G396900 Sobic002G186600--Sobic001G493800 Sobic006G162700 Sobic006G162700 Sobic002G186600--Sobic006G162700 Sobic002G186600--Sobic002G206200 Sobic009G202900 Sobic009G202900 Sobic002G186600--Sobic009G202900 Sobic003G109400 Sobic003G109400 Sobic002G186600--Sobic003G109400 Sobic002G231800 Sobic002G231800 Sobic002G186600--Sobic002G231800
Octagon: transcription factors


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